FFCP PHASE1:Hg19::chrX:11778155..11778177,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7370 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000482871_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_7_at_MSL3_5end | |||
|id=chrX:11778155..11778177,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.20e-64!140;CL:0002087!9.33e-63!119;CL:0002031!9.18e-53!124;CL:0000037!4.41e-50!172;CL:0000566!4.41e-50!172;CL:0000988!3.22e-49!182;CL:0002032!1.54e-46!165;CL:0000837!1.54e-46!165;CL:0000542!9.32e-41!53;CL:0000051!9.32e-41!53;CL:0000838!8.42e-40!52;CL:0002057!5.71e-30!42;CL:0000860!1.35e-28!45;CL:0000945!2.60e-26!24;CL:0000826!2.60e-26!24;CL:0000766!6.21e-22!76;CL:0002194!3.27e-20!63;CL:0000576!3.27e-20!63;CL:0000040!3.27e-20!63;CL:0000559!3.27e-20!63;CL:0002009!3.33e-19!65;CL:0000236!2.02e-17!14;CL:0000839!5.99e-17!70;CL:0000557!1.54e-16!71;CL:0000791!1.83e-14!18;CL:0000789!1.83e-14!18;CL:0002420!1.83e-14!18;CL:0002419!1.83e-14!18;CL:0000790!1.83e-14!18;CL:0000763!2.31e-13!112;CL:0000049!2.31e-13!112;CL:0000084!2.92e-13!25;CL:0000827!2.92e-13!25;CL:0000625!7.18e-10!11;CL:0000134!2.27e-09!358;CL:0002320!1.01e-08!365;CL:0000624!2.13e-07!6;CL:0000219!7.51e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.34e-32;24!CL:0000236;1.06e-16;13!CL:0000542;4.12e-16;53!CL:0000784;2.50e-12;3!CL:0002087;9.16e-12;104!CL:0000860;1.83e-10;33!CL:0002057;1.83e-10;33!CL:0000738;1.87e-08;136!CL:0000473;1.85e-07;39!CL:0000234;1.85e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.12e-34,136;CL:0000945,5.36e-33,24;CL:0000826,5.36e-33,24;CL:0002087,8.95e-31,115;CL:0002031,3.78e-29,120;CL:0000037,1.13e-27,168;CL:0000838,6.08e-27,52;CL:0000542,2.48e-26,53;CL:0000051,2.48e-26,53;CL:0002032,7.41e-26,161;CL:0000837,7.41e-26,161;CL:0000988,8.68e-26,177;CL:0000236,3.33e-20,14;CL:0000784,3.48e-12,3;CL:0000860,1.93e-11,42;CL:0002057,1.93e-11,42;CL:0000766,2.91e-10,72;CL:0000473,1.14e-09,48;CL:0000234,1.14e-09,48;CL:0002194,1.44e-08,59;CL:0000576,1.44e-08,59;CL:0000040,1.44e-08,59;CL:0000559,1.44e-08,59;CL:0000134,3.04e-08,354;CL:0002009,3.39e-08,61;CL:0002320,6.57e-08,361;CL:0000839,2.28e-07,66;CL:0000557,3.22e-07,67;CL:0000219,9.79e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;4.12e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.91e-28!102;UBERON:0003061!3.91e-28!102;UBERON:0002193!4.09e-27!112;UBERON:0002371!2.44e-14!80;UBERON:0000178!8.52e-14!15;UBERON:0000179!8.52e-14!15;UBERON:0000463!8.52e-14!15;UBERON:0001474!1.65e-12!86;UBERON:0002405!2.60e-12!115;UBERON:0004765!5.48e-09!101;UBERON:0001434!5.48e-09!101;UBERON:0002384!3.31e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.28e-10,98;UBERON:0003061,9.28e-10,98;UBERON:0002193,1.88e-08,108;UBERON:0002384,1.88e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0269380312399,13.2181949014413,17.3950826703231,0.393364276848904,1.15148819429164,0.928896739896456,0,0,0,0.232401601740905,0,0,1.66198622559563,0.601633342410425,0.434021741431704,0,0,0.257575567634187,1.01778767145695,0.377875943688809,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,1.03423704220986,0.645484683583826,0,0.188242339542605,0.545812300115692,1.12361742222542,2.14258724659632,1.60464513538047,1.27867425159808,1.64925650093358,0.598390972864896,0.426224750532694,0.870627715885752,0,0,1.00499466102697,1.0429658368404,0.434377689410233,0.605399502633369,1.47311054395026,0.949387162322653,0.845021145247767,0,0,0.673971786878971,1.20141514273205,1.28580469357664,0.285012743741249,0,0.182664153764634,1.75996244461323,1.09227722252426,1.77901850772711,0.853460445133014,1.60158394814405,2.29900975981793,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,1.91136614062614,0,0,0.526768169550154,1.180258620683,0.393010762749165,0.616804496998528,1.83905144929746,0.651844533267181,0.946895611469467,3.89653456815823,0.334231370655521,1.17842362989935,1.55073726208535,1.62482318259009,0.512365278902701,0.390178042679635,0.493313713811028,0.276350017785848,0.579606171470105,0.444859689486181,1.87278579662799,1.04535523804977,0.453237370790265,0.383220493601921,0.34362744548263,1.77113784413652,1.59282707162048,0.651083453856419,1.90090408889675,0.602300476311091,0.895906278080929,1.24930726552346,0.473554504088034,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0,3.57735936458013,1.14398982156026,4.82894751728434,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0.764637207142375,1.70894156152249,0.476463550915578,0,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0.557409525377156,0.432807638929335,0.426851060090485,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0.20453736500431,7.50817313312524,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0.593042257361244,0.123563938946503,0.522109747527277,0.134802265961354,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,9.37803007532899,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,16.5936942080322,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,3.7977639251473,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.710478008196067,0.931120714437869,0,0,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.00636896795513,5.77023286145819 | |||
|short_description=p7@MSL3 | |||
}} |
Revision as of 04:48, 23 January 2014
Short description: | p7@MSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MSL3_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000482871_5end |
EntrezGene: | MSL3 |
HGNC: | 7370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.12e-34 | 136 |
lymphocyte of B lineage | 5.36e-33 | 24 |
pro-B cell | 5.36e-33 | 24 |
nongranular leukocyte | 8.95e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 3.78e-29 | 120 |
hematopoietic stem cell | 1.13e-27 | 168 |
lymphoid lineage restricted progenitor cell | 6.08e-27 | 52 |
lymphocyte | 2.48e-26 | 53 |
common lymphoid progenitor | 2.48e-26 | 53 |
hematopoietic oligopotent progenitor cell | 7.41e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-26 | 161 |
hematopoietic cell | 8.68e-26 | 177 |
B cell | 3.33e-20 | 14 |
plasmacytoid dendritic cell | 3.48e-12 | 3 |
classical monocyte | 1.93e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-11 | 42 |
myeloid leukocyte | 2.91e-10 | 72 |
defensive cell | 1.14e-09 | 48 |
phagocyte | 1.14e-09 | 48 |
monopoietic cell | 1.44e-08 | 59 |
monocyte | 1.44e-08 | 59 |
monoblast | 1.44e-08 | 59 |
promonocyte | 1.44e-08 | 59 |
mesenchymal cell | 3.04e-08 | 354 |
macrophage dendritic cell progenitor | 3.39e-08 | 61 |
connective tissue cell | 6.57e-08 | 361 |
myeloid lineage restricted progenitor cell | 2.28e-07 | 66 |
granulocyte monocyte progenitor cell | 3.22e-07 | 67 |
motile cell | 9.79e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.28e-10 | 98 |
blood island | 9.28e-10 | 98 |
hemolymphoid system | 1.88e-08 | 108 |
connective tissue | 1.88e-07 | 371 |