FFCP PHASE1:Hg19::chrX:107288318..107288331,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=340547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28675 | |||
|TSSclassifier=strong | |||
|UniProt=C9JY48 | |||
|association_with_transcript=23bp_to_ENST00000458383_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_4_at_VSIG1_5end | |||
|id=chrX:107288318..107288331,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.62e-23;1!UBERON:0009117;6.78e-10;10!UBERON:0005564;6.78e-10;10!UBERON:0004161;5.20e-09;11!UBERON:0009497;9.20e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!7.68e-13!1;UBERON:0001018!7.68e-13!1;UBERON:0002473!7.68e-13!1;UBERON:0005340!7.68e-13!1;UBERON:0002316!7.68e-13!1;UBERON:0003544!7.68e-13!1;UBERON:0001020!7.68e-13!1;UBERON:0005970!7.68e-13!1;UBERON:0002437!7.68e-13!1;UBERON:0000007!3.93e-07!2;UBERON:0001255!4.17e-07!2;UBERON:0001556!4.17e-07!2;UBERON:0005162!4.69e-07!2;UBERON:0000122!4.69e-07!2;UBERON:0000473!5.88e-07!8;UBERON:0000945!6.61e-07!8;UBERON:0010039!6.61e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.18e-18;5!UBERON:0010039;1.18e-18;5!UBERON:0000473;3.95e-12;8!UBERON:0005409;2.78e-09;22!UBERON:0003135;4.43e-09;11!UBERON:0002110;1.12e-08;3!UBERON:0002114;1.35e-08;2!UBERON:0001041;2.81e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.95e-12,8;UBERON:0000945,4.94e-12,8;UBERON:0010039,4.94e-12,8;UBERON:0003135,4.43e-09,11;UBERON:0002110,1.12e-08,3;UBERON:0006242,1.12e-08,3;UBERON:0002114,1.30e-08,2;UBERON:0005409,2.79e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90941887900511,0,2.59362750877391,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79149622451767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.9437919181072,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,7.8809846146969,13.9341347681213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@VSIG1 | |||
}} |
Revision as of 06:33, 23 January 2014
Short description: | p4@VSIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_VSIG1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 23bp_to_ENST00000458383_5end |
EntrezGene: | VSIG1 |
HGNC: | 28675 |
UniProt: | C9JY48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.95e-12 | 8 |
stomach | 4.94e-12 | 8 |
food storage organ | 4.94e-12 | 8 |
male reproductive organ | 4.43e-09 | 11 |
gallbladder | 1.12e-08 | 3 |
gall bladder primordium | 1.12e-08 | 3 |
duodenum | 1.30e-08 | 2 |
gastrointestinal system | 2.79e-08 | 25 |