FFCP PHASE1:Hg19::chrX:133119988..133119999,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2719 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4451 | |||
|TSSclassifier=strong | |||
|UniProt=P51654 | |||
|association_with_transcript=-66bp_to_ENST00000370818_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_6_at_GPC3_5end | |||
|id=chrX:133119988..133119999,- | |||
|ontology_enrichment_celltype=CL:0002322!3.49e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.95e-39;5!CL:0002321;5.20e-13;15!CL:0000182;2.07e-11;12!CL:0000148;1.20e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.18e-39,5;CL:0000182,2.08e-11,12;CL:0000148,9.82e-08,10;CL:0000541,9.82e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.13e-20;31!UBERON:0004161;6.44e-19;11!UBERON:0009497;5.49e-16;13!UBERON:0003124;1.43e-09;1!UBERON:0003099;3.12e-09;1!UBERON:0003852;3.12e-09;1!UBERON:0001041;8.27e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.12e-09;1!DOID:4549;3.12e-09;1!DOID:5861;3.12e-09;1!DOID:6496;3.12e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.00e-09,1;DOID:4549,3.00e-09,1;DOID:5861,3.00e-09,1;DOID:6496,3.00e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.03e-11;49!UBERON:0002107;6.98e-11;19!UBERON:0006925;6.98e-11;19!UBERON:0007029;3.12e-09;1!UBERON:0005705;3.12e-09;1!UBERON:0008193;3.12e-09;1!UBERON:0010912;3.12e-09;1!UBERON:0002514;3.12e-09;1!UBERON:0003457;3.12e-09;1!UBERON:0008907;3.12e-09;1!UBERON:0008001;3.12e-09;1!UBERON:0007213;3.12e-09;1!UBERON:0009891;3.12e-09;1!UBERON:0007914;3.12e-09;1!UBERON:0007375;3.12e-09;1!UBERON:0003323;3.12e-09;1!UBERON:0010258;3.12e-09;1!UBERON:0005253;3.12e-09;1!UBERON:0007842;3.12e-09;1!UBERON:0002397;3.12e-09;1!UBERON:0003113;3.12e-09;1!UBERON:0003277;3.12e-09;1!UBERON:0001709;3.12e-09;1!UBERON:0002244;3.12e-09;1!UBERON:0005620;3.12e-09;1!UBERON:0010364;3.12e-09;1!UBERON:0004288;3.12e-09;1!UBERON:0002423;3.22e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.99e-11,19;UBERON:0006925,6.99e-11,19;UBERON:0008836,6.99e-11,19;UBERON:0008835,2.28e-09,22;UBERON:0003894,2.28e-09,22;UBERON:0007029,3.53e-09,1;UBERON:0005705,3.83e-09,1;UBERON:0008193,3.83e-09,1;UBERON:0010912,3.83e-09,1;UBERON:0002514,3.83e-09,1;UBERON:0003457,3.83e-09,1;UBERON:0008907,3.83e-09,1;UBERON:0008001,3.83e-09,1;UBERON:0007213,3.83e-09,1;UBERON:0009891,3.83e-09,1;UBERON:0007914,3.83e-09,1;UBERON:0009292,3.83e-09,1;UBERON:0003099,3.83e-09,1;UBERON:0007375,3.83e-09,1;UBERON:0003323,3.83e-09,1;UBERON:0010258,3.83e-09,1;UBERON:0007842,3.83e-09,1;UBERON:0009494,3.83e-09,1;UBERON:0010042,3.83e-09,1;UBERON:0010045,3.83e-09,1;UBERON:0010259,3.83e-09,1;UBERON:0010359,3.83e-09,1;UBERON:0009526,3.83e-09,1;UBERON:0002397,3.83e-09,1;UBERON:0003113,3.83e-09,1;UBERON:0003277,3.83e-09,1;UBERON:0001709,3.83e-09,1;UBERON:0004066,3.83e-09,1;UBERON:0002244,3.83e-09,1;UBERON:0005620,3.83e-09,1;UBERON:0004362,3.83e-09,1;UBERON:0010364,3.83e-09,1;UBERON:0010046,3.83e-09,1;UBERON:0005868,3.83e-09,1;UBERON:0007238,3.83e-09,1;UBERON:0004288,3.83e-09,1;UBERON:0004068,3.83e-09,1;UBERON:0010334,3.83e-09,1;UBERON:0003852,3.83e-09,1;UBERON:0010253,3.83e-09,1;UBERON:0009854,5.94e-09,23;UBERON:0007499,3.22e-08,25;UBERON:0009497,3.22e-08,25;UBERON:0000015,3.22e-08,25;UBERON:0002423,3.22e-08,25;UBERON:0006235,3.22e-08,25;UBERON:0004161,3.22e-08,25;UBERON:0009856,6.81e-08,26;UBERON:0005172,9.40e-07,54;UBERON:0005173,9.40e-07,54;UBERON:0003929,9.67e-07,54 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,1.85541675650079,1.51052125730374,1.7622379352613,1.51392510525377,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,5.12755541411871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,1.5003541537555,0,0,0,0,0,0,0,0,0,0.458146384663663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,12.8145544480199,19.5382292121915,16.6480033929956,19.9514489808387,0,0,0,0.136203406111576,0.482259445395058,0.137539436597234,0,0,0,0,0,0.0788057072991982,1.88836517285993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95041333473328,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,2.12885688390333,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,1.73858272302579,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,2.3196288626764,1.45713297917742,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0.5290268405154,0,0,0,0,0.874124575709564,1.14028650910293,0.101988829741982,0,0,0.50141507858475,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p6@GPC3 | |||
}} |
Revision as of 06:59, 23 January 2014
Short description: | p6@GPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPC3_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -66bp_to_ENST00000370818_5end |
EntrezGene: | GPC3 |
HGNC: | 4451 |
UniProt: | P51654 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.18e-39 | 5 |
hepatocyte | 2.08e-11 | 12 |
melanocyte | 9.82e-08 | 10 |
melanoblast | 9.82e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.00e-09 | 1 |
extraosseous chondrosarcoma | 3.00e-09 | 1 |
myxoid chondrosarcoma | 3.00e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 3.00e-09 | 1 |