Personal tools

CL:0000123: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000123
|alt_id=
|name=neuron associated cell (sensu Vertebrata)
|namespace=cell
|def=
|xref=
|is_a=CL:0000095
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000333
|develops_from=CL:0000333
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000123
|is_a=CL:0000095
|is_obsolete=
|located_in=
|located_in=
|name=neuron associated cell (sensu Vertebrata)
|namespace=cell
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:14, 12 September 2014

Name:neuron associated cell (sensu Vertebrata)
Namespace:cell


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000095(neuron associated cell)
develops_from:CL:0000333(migratory neural crest cell)



Children


is a:CL:0000242 (Merkel cell),CL:0000339 (glioblast (sensu Vertebrata)),CL:0002453 (oligodendrocyte precursor cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000123 (neuron associated cell (sensu Vertebrata)), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.33e-61FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_3fe21e07ac8fef1943cd57769bfc0454p@chr8:28132545..28132551, +
8.33e-61FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_3fe21e07ac8fef1943cd57769bfc0454p@chr1:72873192..72873206, +
8.33e-61FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_3fe21e07ac8fef1943cd57769bfc0454p@chr1:72873192..72873206, +
8.33e-61FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_3fe21e07ac8fef1943cd57769bfc0454p@chr8:28132545..28132551, +
1.74e-53FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_ca8763ff3d7577e6071a4da739859414p14@Slc3a2
1.74e-53FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_ca8763ff3d7577e6071a4da739859414p14@Slc3a2
3.55e-53FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_c61f0bb13617779dbf9b102456df15fap@chr8:11006242..11006246, -
3.55e-53FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_c61f0bb13617779dbf9b102456df15fap@chr8:11006242..11006246, -
3.17e-52FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_2dee495916ea750dfbccecfa1a216545p@chr4:169553987..169553999, +
3.17e-52FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_2dee495916ea750dfbccecfa1a216545p@chr4:169553987..169553999, +
8.65e-48FFCP PHASE1:Mm9::chr8:96677906..96677921,-#_02179eb838f06144ba22641d8087df55p@chr8:96677906..96677921, -
8.65e-48FFCP PHASE2:Mm9::chr3:121130390..121130408,-#_02179eb838f06144ba22641d8087df55p@chr3:121130390..121130408, -
8.65e-48FFCP PHASE2:Mm9::chr19:8788794..8788806,-#_02179eb838f06144ba22641d8087df55p6@Slc3a2
8.65e-48FFCP PHASE1:Mm9::chr19:8788794..8788806,-#_02179eb838f06144ba22641d8087df55p6@Slc3a2
8.65e-48FFCP PHASE2:Mm9::chr8:96677906..96677921,-#_02179eb838f06144ba22641d8087df55p@chr8:96677906..96677921, -
8.65e-48FFCP PHASE1:Mm9::chr8:96677795..96677811,+#_02179eb838f06144ba22641d8087df55p@chr8:96677795..96677811, +
8.65e-48FFCP PHASE2:Mm9::chr8:96677795..96677811,+#_02179eb838f06144ba22641d8087df55p@chr8:96677795..96677811, +
8.65e-48FFCP PHASE1:Mm9::chr3:121130390..121130408,-#_02179eb838f06144ba22641d8087df55p@chr3:121130390..121130408, -
1.01e-47FFCP PHASE2:Mm9::chr11:102758074..102758083,+#_2d2a230f0385a160ae8656bc3023f32ap@chr11:102758074..102758083, +
1.01e-47FFCP PHASE1:Mm9::chr11:102758074..102758083,+#_2d2a230f0385a160ae8656bc3023f32ap@chr11:102758074..102758083, +
1.01e-47FFCP PHASE1:Mm9::chr3:89028994..89029006,+#_2d2a230f0385a160ae8656bc3023f32ap5@Thbs3
1.01e-47FFCP PHASE2:Mm9::chr3:89028994..89029006,+#_2d2a230f0385a160ae8656bc3023f32ap5@Thbs3
1.39e-47FFCP PHASE2:Mm9::chr14:122864178..122864180,+#_258b544fdebf17a871b1df583c7e38e5p@chr14:122864178..122864180, +
1.39e-47FFCP PHASE1:Mm9::chr14:122864178..122864180,+#_258b544fdebf17a871b1df583c7e38e5p@chr14:122864178..122864180, +
4.52e-45FFCP PHASE1:Mm9::chr9:37174919..37174932,+#_37b1f0f45e42ac8d2a1c7a2b21121cb3p3@Hepacam
4.52e-45FFCP PHASE2:Mm9::chr11:102807862..102807882,-#_37b1f0f45e42ac8d2a1c7a2b21121cb3p4@C1ql1
4.52e-45FFCP PHASE2:Mm9::chr9:37174919..37174932,+#_37b1f0f45e42ac8d2a1c7a2b21121cb3p3@Hepacam
4.52e-45FFCP PHASE1:Mm9::chr11:102807862..102807882,-#_37b1f0f45e42ac8d2a1c7a2b21121cb3p4@C1ql1
5.38e-45FFCP PHASE1:Mm9::chr11:102754827..102754845,-#_230c929ec785310943113d2cc6c048cfp@chr11:102754827..102754845, -
5.38e-45FFCP PHASE2:Mm9::chr11:102754827..102754845,-#_230c929ec785310943113d2cc6c048cfp@chr11:102754827..102754845, -
7.62e-45FFCP PHASE1:Mm9::chr14:70592626..70592638,-#_0b5e53ecb7e7c5429107fd9c574a447cp@chr14:70592626..70592638, -
7.62e-45FFCP PHASE2:Mm9::chr14:70592626..70592638,-#_0b5e53ecb7e7c5429107fd9c574a447cp@chr14:70592626..70592638, -
8.43e-44FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_ee60e6c31278e76e55b54259881b1e06p@chr8:73022520..73022524, +
8.43e-44FFCP PHASE1:Mm9::chr16:15895800..15895814,-#_ee60e6c31278e76e55b54259881b1e06p@chr16:15895800..15895814, -
8.43e-44FFCP PHASE1:Mm9::chr11:102749254..102749263,-#_ee60e6c31278e76e55b54259881b1e06p@chr11:102749254..102749263, -
8.43e-44FFCP PHASE2:Mm9::chr16:15895800..15895814,-#_ee60e6c31278e76e55b54259881b1e06p@chr16:15895800..15895814, -
8.43e-44FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_ee60e6c31278e76e55b54259881b1e06p@chr8:73022520..73022524, +
8.43e-44FFCP PHASE1:Mm9::chr11:75244815..75244826,-#_ee60e6c31278e76e55b54259881b1e06p@chr11:75244815..75244826, -
8.43e-44FFCP PHASE2:Mm9::chr11:102749254..102749263,-#_ee60e6c31278e76e55b54259881b1e06p@chr11:102749254..102749263, -
8.43e-44FFCP PHASE1:Mm9::chr3:88990698..88990709,+#_ee60e6c31278e76e55b54259881b1e06p@chr3:88990698..88990709, +
8.43e-44FFCP PHASE2:Mm9::chr3:88990698..88990709,+#_ee60e6c31278e76e55b54259881b1e06p@chr3:88990698..88990709, +
8.43e-44FFCP PHASE2:Mm9::chr11:75244815..75244826,-#_ee60e6c31278e76e55b54259881b1e06p@chr11:75244815..75244826, -
3.14e-43FFCP PHASE1:Mm9::chr8:96676892..96676904,+#_433243dab79fc1e29d019e3088c78242p@chr8:96676892..96676904, +
3.14e-43FFCP PHASE1:Mm9::chr8:93340930..93340944,-#_433243dab79fc1e29d019e3088c78242p@chr8:93340930..93340944, -
3.14e-43FFCP PHASE2:Mm9::chr8:96676892..96676904,+#_433243dab79fc1e29d019e3088c78242p@chr8:96676892..96676904, +
3.14e-43FFCP PHASE2:Mm9::chr8:93340930..93340944,-#_433243dab79fc1e29d019e3088c78242p@chr8:93340930..93340944, -
3.62e-43FFCP PHASE1:Mm9::chr3:89030096..89030118,+#_54dc63d3b1c46e7a4c5b355011d8f4d6p4@Thbs3
3.62e-43FFCP PHASE2:Mm9::chr3:89030096..89030118,+#_54dc63d3b1c46e7a4c5b355011d8f4d6p4@Thbs3
4.82e-43FFCP PHASE1:Mm9::chr12:112910294..112910300,-#_fd8b8af8ac4bf17a242699400c205652p@chr12:112910294..112910300, -
4.82e-43FFCP PHASE2:Mm9::chr12:112910294..112910300,-#_fd8b8af8ac4bf17a242699400c205652p@chr12:112910294..112910300, -
5.57e-43FFCP PHASE2:Mm9::chr11:102755848..102755857,-#_8f89e0b20faf7245e4f092a76b242051p@chr11:102755848..102755857, -
5.57e-43FFCP PHASE1:Mm9::chr11:102755848..102755857,-#_8f89e0b20faf7245e4f092a76b242051p@chr11:102755848..102755857, -
1.31e-42FFCP PHASE1:Mm9::chr7:148211055..148211073,+#_52e06f496eeea1e442c197cef0cd629ep@chr7:148211055..148211073, +
1.31e-42FFCP PHASE2:Mm9::chr7:148211055..148211073,+#_52e06f496eeea1e442c197cef0cd629ep@chr7:148211055..148211073, +
2.31e-42FFCP PHASE2:Mm9::chr2:11261132..11261153,+#_4d75ac27f742891d29dd756aba6e9e36p2@Gm13293
2.31e-42FFCP PHASE1:Mm9::chr2:11261132..11261153,+#_4d75ac27f742891d29dd756aba6e9e36p2@Gm13293
1.46e-41FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_0c0d2b5b735c7470aac0d51607955abcp@chr1:98642833..98642844, +
1.46e-41FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_0c0d2b5b735c7470aac0d51607955abcp@chr1:98642833..98642844, +
1.6e-40FFCP PHASE1:Mm9::chr1:174128350..174128367,+#_adad6a1da39e75f175cee8821637680ep@chr1:174128350..174128367, +
1.6e-40FFCP PHASE2:Mm9::chr1:174128350..174128367,+#_adad6a1da39e75f175cee8821637680ep@chr1:174128350..174128367, +
7.38e-40FFCP PHASE1:Mm9::chr1:72895848..72895864,+#_d173f52a274079c013bb4d9aef7ad247p@chr1:72895848..72895864, +
7.38e-40FFCP PHASE2:Mm9::chr1:72895848..72895864,+#_d173f52a274079c013bb4d9aef7ad247p@chr1:72895848..72895864, +
1.17e-39FFCP PHASE1:Mm9::chr3:88990668..88990679,+#_6cfec50dd9ab33f8666d69c21486b7b4p@chr3:88990668..88990679, +
1.17e-39FFCP PHASE2:Mm9::chr3:88990668..88990679,+#_6cfec50dd9ab33f8666d69c21486b7b4p@chr3:88990668..88990679, +
1.59e-39FFCP PHASE1:Mm9::chr19:8788690..8788697,-#_8c8e4dac0153991a3dfd7891997b5bcdp17@Slc3a2
1.59e-39FFCP PHASE2:Mm9::chr19:8788690..8788697,-#_8c8e4dac0153991a3dfd7891997b5bcdp17@Slc3a2
2.16e-39FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_af1b6dd106da97506f7c7b96b3b7f253p@chr8:96704054..96704065, -
2.16e-39FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_af1b6dd106da97506f7c7b96b3b7f253p@chr8:96704054..96704065, -
2.2e-39FFCP PHASE2:Mm9::chr1:174150595..174150602,-#_adfaedd9a0f3e7a581dc5ca569ea020ap@chr1:174150595..174150602, -
2.2e-39FFCP PHASE1:Mm9::chr1:174150595..174150602,-#_adfaedd9a0f3e7a581dc5ca569ea020ap@chr1:174150595..174150602, -
2.51e-39FFCP PHASE2:Mm9::chr1:174128178..174128192,-#_c392cbf057bb969a2b115ef5fc12971cp@chr1:174128178..174128192, -
2.51e-39FFCP PHASE1:Mm9::chr1:174128178..174128192,-#_c392cbf057bb969a2b115ef5fc12971cp@chr1:174128178..174128192, -
2.51e-39FFCP PHASE1:Mm9::chr16:15895858..15895888,-#_c392cbf057bb969a2b115ef5fc12971cp@chr16:15895858..15895888, -
2.51e-39FFCP PHASE2:Mm9::chr16:15895858..15895888,-#_c392cbf057bb969a2b115ef5fc12971cp@chr16:15895858..15895888, -
8.08e-39FFCP PHASE2:Mm9::chr1:72895732..72895747,-#_0f68af3cc14f4d854ddf21b7e7d2998bp@chr1:72895732..72895747, -
8.08e-39FFCP PHASE1:Mm9::chr1:72895732..72895747,-#_0f68af3cc14f4d854ddf21b7e7d2998bp@chr1:72895732..72895747, -
4.04e-38FFCP PHASE1:Mm9::chr19:12839908..12839933,-#_001f0943aaf5a3d2590b5ea39a466a08p2@Cntf
4.04e-38FFCP PHASE2:Mm9::chr19:12839908..12839933,-#_001f0943aaf5a3d2590b5ea39a466a08p2@Cntf
5.94e-38FFCP PHASE1:Mm9::chr1:72898598..72898634,+#_f680c2db3c3e4de15e78f638524116c3p@chr1:72898598..72898634, +
5.94e-38FFCP PHASE2:Mm9::chr1:72898598..72898634,+#_f680c2db3c3e4de15e78f638524116c3p@chr1:72898598..72898634, +
7.4e-38FFCP PHASE1:Mm9::chr1:72898658..72898669,+#_ad387037dff5088016a3e6798a5ffd83p@chr1:72898658..72898669, +
7.4e-38FFCP PHASE2:Mm9::chr1:72898658..72898669,+#_ad387037dff5088016a3e6798a5ffd83p@chr1:72898658..72898669, +
1.03e-37FFCP PHASE1:Mm9::chr11:88828250..88828258,-#_92cc074ecb5ea70bf801dd259d4c204ap1@ENSMUST00000121228
1.03e-37FFCP PHASE2:Mm9::chr11:88828250..88828258,-#_92cc074ecb5ea70bf801dd259d4c204ap1@ENSMUST00000121228
9.57e-37FFCP PHASE1:Mm9::chr11:102754448..102754459,-#_40f0a9e47255785283950a136b83870ep@chr11:102754448..102754459, -
9.57e-37FFCP PHASE2:Mm9::chr11:102754448..102754459,-#_40f0a9e47255785283950a136b83870ep@chr11:102754448..102754459, -
1.13e-36FFCP PHASE1:Mm9::chr4:153975408..153975411,+#_90300965f4b1e90fcc80e757b12ff01bp1@ENSMUST00000132106
1.13e-36FFCP PHASE2:Mm9::chr4:153975408..153975411,+#_90300965f4b1e90fcc80e757b12ff01bp1@ENSMUST00000132106
1.13e-36FFCP PHASE1:Mm9::chr14:70592673..70592699,-#_90300965f4b1e90fcc80e757b12ff01bp@chr14:70592673..70592699, -
1.13e-36FFCP PHASE1:Mm9::chr1:174128464..174128474,-#_90300965f4b1e90fcc80e757b12ff01bp@chr1:174128464..174128474, -
1.13e-36FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_90300965f4b1e90fcc80e757b12ff01bp@chr1:72895689..72895698, -
1.13e-36FFCP PHASE2:Mm9::chr1:174128464..174128474,-#_90300965f4b1e90fcc80e757b12ff01bp@chr1:174128464..174128474, -
1.13e-36FFCP PHASE2:Mm9::chr14:70592673..70592699,-#_90300965f4b1e90fcc80e757b12ff01bp@chr14:70592673..70592699, -
1.13e-36FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_90300965f4b1e90fcc80e757b12ff01bp@chr1:72895689..72895698, -
1.59e-36FFCP PHASE2:Mm9::chr1:72898643..72898650,+#_1dea8538fce3b1861ee1e5d99b6f47cfp@chr1:72898643..72898650, +
1.59e-36FFCP PHASE1:Mm9::chr1:72898728..72898736,+#_1dea8538fce3b1861ee1e5d99b6f47cfp@chr1:72898728..72898736, +
1.59e-36FFCP PHASE2:Mm9::chr1:72898728..72898736,+#_1dea8538fce3b1861ee1e5d99b6f47cfp@chr1:72898728..72898736, +
1.59e-36FFCP PHASE1:Mm9::chr1:72898643..72898650,+#_1dea8538fce3b1861ee1e5d99b6f47cfp@chr1:72898643..72898650, +
1.88e-36FFCP PHASE1:Mm9::chr1:72895653..72895660,+#_2ccdc43cc26e2ebd9bf0770f681452b8p9@Igfbp2
1.88e-36FFCP PHASE2:Mm9::chr1:72895653..72895660,+#_2ccdc43cc26e2ebd9bf0770f681452b8p9@Igfbp2

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000123&oldid=3271861"