DOID:66: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:66 | |||
|is_a=DOID:0080000 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=muscle tissue disease | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym= | ||
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}} | }} | ||
Revision as of 10:36, 12 September 2014
| Name: | muscle tissue disease |
|---|---|
| Namespace: | disease_ontology |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0080000(muscular disease) |
|---|
Children
| is a: | DOID:423 (myopathy) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Mouse (Mus musculus)
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:66 (muscle tissue disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.5e-156 | FFCP PHASE1:Hg19::chr15:33180439..33180446,-#_e3010ecf6ac5bbef9ff06ab5cb1e6a83 | p@chr15:33180439..33180446, - |
| 1.5e-156 | FFCP PHASE2:Hg19::chr15:33180439..33180446,-#_e3010ecf6ac5bbef9ff06ab5cb1e6a83 | p@chr15:33180439..33180446, - |
| 6.23e-66 | FFCP PHASE1:Hg19::chr13:24044226..24044237,+#_18150c2a7399644a9db1660d8494b5a0 | p1@LINC00327 |
| 6.23e-66 | FFCP PHASE2:Hg19::chr13:24044226..24044237,+#_18150c2a7399644a9db1660d8494b5a0 | p1@LINC00327 |
| 3.99e-52 | FFCP PHASE2:Hg19::chr4:184271970..184271992,-#_9dbd46820bdacfe85be87d5b18e29663 | p@chr4:184271970..184271992, - |
| 3.99e-52 | FFCP PHASE1:Hg19::chr4:184271970..184271992,-#_9dbd46820bdacfe85be87d5b18e29663 | p@chr4:184271970..184271992, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr15:33180622..33180633,-#_030d8fd08890019e6784930432ac7d8c | p13@FMN1 |
| 3.24e-51 | FFCP PHASE2:Hg19::chr15:33180622..33180633,-#_030d8fd08890019e6784930432ac7d8c | p13@FMN1 |
| 8.65e-49 | FFCP PHASE2:Hg19::chr13:24044200..24044211,+#_3b996ac70f1816dddcc0be00b4460674 | p2@LINC00327 |
| 8.65e-49 | FFCP PHASE2:Hg19::chr1:198636401..198636419,-#_3b996ac70f1816dddcc0be00b4460674 | p3@ENST00000413577 |
| 8.65e-49 | FFCP PHASE1:Hg19::chr13:24044200..24044211,+#_3b996ac70f1816dddcc0be00b4460674 | p2@LINC00327 |
| 8.65e-49 | FFCP PHASE1:Hg19::chr1:198636401..198636419,-#_3b996ac70f1816dddcc0be00b4460674 | p3@ENST00000413577 |
| 8.92e-46 | FFCP PHASE2:Hg19::chr1:197886646..197886657,+#_33f631ad9cc64719e6033e13e240dcd6 | p5@LHX9 |
| 8.92e-46 | FFCP PHASE1:Hg19::chr1:197886646..197886657,+#_33f631ad9cc64719e6033e13e240dcd6 | p5@LHX9 |
| 3.84e-42 | FFCP PHASE1:Hg19::chr22:48819856..48819861,+#_6c477568338ac4595e4f1564c1b52882 | p@chr22:48819856..48819861, + |
| 3.84e-42 | FFCP PHASE2:Hg19::chr22:48819856..48819861,+#_6c477568338ac4595e4f1564c1b52882 | p@chr22:48819856..48819861, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:55505693..55505698,+#_9c2b19bff6e8f7b27a5cffe9a362829d | p7@PCSK9 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:55505693..55505698,+#_9c2b19bff6e8f7b27a5cffe9a362829d | p7@PCSK9 |
| 2.71e-40 | FFCP PHASE1:Hg19::chr2:100323985..100323997,-#_1bc1bb46cea22668fefa1297a9ac4ae9 | p@chr2:100323985..100323997, - |
| 2.71e-40 | FFCP PHASE2:Hg19::chr2:100323985..100323997,-#_1bc1bb46cea22668fefa1297a9ac4ae9 | p@chr2:100323985..100323997, - |
| 5.85e-40 | FFCP PHASE2:Hg19::chr15:39571769..39571781,-#_2c4385dea1869f5aaec8243430e76d69 | p@chr15:39571769..39571781, - |
| 5.85e-40 | FFCP PHASE1:Hg19::chr15:39571769..39571781,-#_2c4385dea1869f5aaec8243430e76d69 | p@chr15:39571769..39571781, - |
| 2.05e-39 | FFCP PHASE1:Hg19::chr15:33180498..33180522,-#_367c0283cc38d5ab24aaf9c6c4468d32 | p4@FMN1 |
| 2.05e-39 | FFCP PHASE2:Hg19::chr15:33180498..33180522,-#_367c0283cc38d5ab24aaf9c6c4468d32 | p4@FMN1 |
| 7.88e-38 | FFCP PHASE2:Hg19::chrX:3102846..3102872,+#_207c9c46e3e6d40907f14c38dfd894d5 | p@chrX:3102846..3102872, + |
| 7.88e-38 | FFCP PHASE1:Hg19::chrX:3102846..3102872,+#_207c9c46e3e6d40907f14c38dfd894d5 | p@chrX:3102846..3102872, + |
| 8.51e-37 | FFCP PHASE2:Hg19::chr1:198636258..198636278,-#_07046a8c3c57e59285ab756cc1ceff38 | p1@ENST00000413577 |
| 8.51e-37 | FFCP PHASE1:Hg19::chr1:198636258..198636278,-#_07046a8c3c57e59285ab756cc1ceff38 | p1@ENST00000413577 |
| 2.0e-36 | FFCP PHASE1:Hg19::chr2:100323966..100323983,-#_bc94aa5e55a9f6dc46ecd32f72451823 | p@chr2:100323966..100323983, - |
| 2.0e-36 | FFCP PHASE2:Hg19::chr2:100323966..100323983,-#_bc94aa5e55a9f6dc46ecd32f72451823 | p@chr2:100323966..100323983, - |
| 1.82e-34 | FFCP PHASE2:Hg19::chr1:197886421..197886432,+#_d5d2a0e898f22581644a80a2dfda9cf6 | p2@LHX9 |
| 1.82e-34 | FFCP PHASE1:Hg19::chr1:197886421..197886432,+#_d5d2a0e898f22581644a80a2dfda9cf6 | p2@LHX9 |
| 3.86e-33 | FFCP PHASE1:Hg19::chr1:197889151..197889159,+#_f1e40aec83cdfbabe215a117ed41cd53 | p@chr1:197889151..197889159, + |
| 3.86e-33 | FFCP PHASE2:Hg19::chr1:197889151..197889159,+#_f1e40aec83cdfbabe215a117ed41cd53 | p@chr1:197889151..197889159, + |
| 4.23e-33 | FFCP PHASE1:Hg19::chr5:167181769..167181798,+#_f109ff0663e128b4efc4a8be248a0d9a | p17@ODZ2 |
| 4.23e-33 | FFCP PHASE2:Hg19::chr5:167181769..167181798,+#_f109ff0663e128b4efc4a8be248a0d9a | p17@ODZ2 |
| 4.31e-33 | FFCP PHASE2:Hg19::chr1:197886772..197886790,+#_af59a3607a36b3b38d52cef4d69b55f3 | p4@LHX9 |
| 4.31e-33 | FFCP PHASE1:Hg19::chr1:197886772..197886790,+#_af59a3607a36b3b38d52cef4d69b55f3 | p4@LHX9 |
| 6.67e-33 | FFCP PHASE2:Hg19::chr1:197886617..197886628,+#_44bab1feffc53c082e540a228bbf5980 | p8@LHX9 |
| 6.67e-33 | FFCP PHASE1:Hg19::chr1:197886617..197886628,+#_44bab1feffc53c082e540a228bbf5980 | p8@LHX9 |
| 9.31e-33 | FFCP PHASE2:Hg19::chr14:32963433..32963487,+#_9004ea5ed7253ea8c54558c7d34e0294 | p4@AKAP6 |
| 9.31e-33 | FFCP PHASE1:Hg19::chr14:32963433..32963487,+#_9004ea5ed7253ea8c54558c7d34e0294 | p4@AKAP6 |
| 9.4e-33 | FFCP PHASE1:Hg19::chr8:23564380..23564391,+#_a70d72a804955d3436ecd72967d96474 | p1@ENST00000523874 |
| 9.4e-33 | FFCP PHASE2:Hg19::chr8:23564380..23564391,+#_a70d72a804955d3436ecd72967d96474 | p1@ENST00000523874 |
| 1.7e-32 | FFCP PHASE1:Hg19::chr20:52570906..52570909,-#_9ca66c78ede8ce5364547266e0021e15 | p@chr20:52570906..52570909, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr20:52570906..52570909,-#_9ca66c78ede8ce5364547266e0021e15 | p@chr20:52570906..52570909, - |
| 1.23e-30 | FFCP PHASE2:Hg19::chr1:197886665..197886732,+#_44a9b2ee65e90f340eaddaad38428de4 | p3@LHX9 |
| 1.23e-30 | FFCP PHASE1:Hg19::chr1:197886665..197886732,+#_44a9b2ee65e90f340eaddaad38428de4 | p3@LHX9 |
| 1.42e-30 | FFCP PHASE1:Hg19::chr15:33180558..33180570,-#_41aa5d1346889b1842c47b4193115ea8 | p9@FMN1 |
| 1.42e-30 | FFCP PHASE2:Hg19::chr15:33180558..33180570,-#_41aa5d1346889b1842c47b4193115ea8 | p9@FMN1 |
| 6.36e-30 | FFCP PHASE1:Hg19::chr2:239778648..239778664,+#_6eeb9d9129a2174c04e2c7493a91aec1 | p@chr2:239778648..239778664, + |
| 6.36e-30 | FFCP PHASE2:Hg19::chr2:239778648..239778664,+#_6eeb9d9129a2174c04e2c7493a91aec1 | p@chr2:239778648..239778664, + |
| 7.23e-30 | FFCP PHASE2:Hg19::chr15:39880996..39881011,+#_c83cd4058bbd94e3de36aa9f42c34b54 | p41@THBS1 |
| 7.23e-30 | FFCP PHASE1:Hg19::chr15:39880996..39881011,+#_c83cd4058bbd94e3de36aa9f42c34b54 | p41@THBS1 |
| 3.13e-29 | FFCP PHASE2:Hg19::chr2:158114405..158114413,+#_d97d8ea95ffc930fa551e6e93cb3c28c | p11@GALNT5 |
| 3.13e-29 | FFCP PHASE1:Hg19::chr2:158114405..158114413,+#_d97d8ea95ffc930fa551e6e93cb3c28c | p11@GALNT5 |
| 6.34e-29 | FFCP PHASE2:Hg19::chr12:114845970..114846000,+#_40c56cf9095806bc3507e638cc129173 | p1@LOC255480 |
| 6.34e-29 | FFCP PHASE1:Hg19::chr12:114845970..114846000,+#_40c56cf9095806bc3507e638cc129173 | p1@LOC255480 |
| 2.45e-28 | FFCP PHASE2:Hg19::chr6:113697548..113697566,-#_b08f4be87dfe51abc4660f0c761d00b3 | p@chr6:113697548..113697566, - |
| 2.45e-28 | FFCP PHASE1:Hg19::chr6:113697548..113697566,-#_b08f4be87dfe51abc4660f0c761d00b3 | p@chr6:113697548..113697566, - |
| 6.02e-28 | FFCP PHASE2:Hg19::chr15:39593792..39593816,-#_c902b7ccb9066f8f9010b35acc4a8313 | p@chr15:39593792..39593816, - |
| 6.02e-28 | FFCP PHASE1:Hg19::chr15:39593792..39593816,-#_c902b7ccb9066f8f9010b35acc4a8313 | p@chr15:39593792..39593816, - |
| 2.04e-27 | FFCP PHASE1:Hg19::chr12:10084960..10084974,-#_59a0f67a94f410f611df4bcce4974354 | p1@CLEC2A |
| 2.04e-27 | FFCP PHASE2:Hg19::chr12:10084960..10084974,-#_59a0f67a94f410f611df4bcce4974354 | p1@CLEC2A |
| 2.08e-27 | FFCP PHASE1:Hg19::chr7:131195751..131195762,+#_26c40e37f28116c07cc57936acda7278 | p@chr7:131195751..131195762, + |
| 2.08e-27 | FFCP PHASE2:Hg19::chr7:131195751..131195762,+#_26c40e37f28116c07cc57936acda7278 | p@chr7:131195751..131195762, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:129815627..129815630,+#_4cd316cc14ae39af705cabe97d958e06 | p@chr10:129815627..129815630, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:129815627..129815630,+#_4cd316cc14ae39af705cabe97d958e06 | p@chr10:129815627..129815630, + |
| 3.55e-27 | FFCP PHASE2:Hg19::chr12:91539677..91539688,-#_4d5615cf36851dee4743bf1774a31fbe | p@chr12:91539677..91539688, - |
| 3.55e-27 | FFCP PHASE1:Hg19::chr12:91539677..91539688,-#_4d5615cf36851dee4743bf1774a31fbe | p@chr12:91539677..91539688, - |
| 6.88e-27 | FFCP PHASE2:Hg19::chr8:23564065..23564087,-#_42f69b50c8d26895af31de4e43211058 | p1@NKX2-6 |
| 6.88e-27 | FFCP PHASE1:Hg19::chr8:23564065..23564087,-#_42f69b50c8d26895af31de4e43211058 | p1@NKX2-6 |
| 1.64e-26 | FFCP PHASE1:Hg19::chr9:125231389..125231402,+#_3f467fd0bc2b3b8a82381185a72daa3b | p2@OR1J2 |
| 1.64e-26 | FFCP PHASE2:Hg19::chr9:125231389..125231402,+#_3f467fd0bc2b3b8a82381185a72daa3b | p2@OR1J2 |
| 3.62e-26 | FFCP PHASE1:Hg19::chr9:110047130..110047161,+#_cc6e1662402ab3b1e0d6e0609a2ca4a1 | p9@RAD23B |
| 3.62e-26 | FFCP PHASE2:Hg19::chr9:110047130..110047161,+#_cc6e1662402ab3b1e0d6e0609a2ca4a1 | p9@RAD23B |
| 2.55e-25 | FFCP PHASE2:Hg19::chr2:238187300..238187323,-#_a6ecb7dbd0bfb941f46cd83324d017b4 | p@chr2:238187300..238187323, - |
| 2.55e-25 | FFCP PHASE1:Hg19::chr2:238187300..238187323,-#_a6ecb7dbd0bfb941f46cd83324d017b4 | p@chr2:238187300..238187323, - |
| 5.73e-25 | FFCP PHASE1:Hg19::chr19:43689230..43689259,+#_755d91db1dcf542d7d2684b187f079cf | p@chr19:43689230..43689259, + |
| 5.73e-25 | FFCP PHASE2:Hg19::chr19:43689230..43689259,+#_755d91db1dcf542d7d2684b187f079cf | p@chr19:43689230..43689259, + |
| 6.31e-25 | FFCP PHASE2:Hg19::chr7:45952643..45952654,-#_1ce28e141632d07628888326a2f34200 | p22@IGFBP3 |
| 6.31e-25 | FFCP PHASE1:Hg19::chr7:45952643..45952654,-#_1ce28e141632d07628888326a2f34200 | p22@IGFBP3 |
| 7.53e-25 | FFCP PHASE2:Hg19::chr5:167181899..167181909,+#_1a110e91cb32ab9c561f9bce2db70f73 | p14@ODZ2 |
| 7.53e-25 | FFCP PHASE1:Hg19::chr5:167181899..167181909,+#_1a110e91cb32ab9c561f9bce2db70f73 | p14@ODZ2 |
| 1.06e-24 | FFCP PHASE1:Hg19::chr6:75914944..75914952,-#_db35fb73a9d4e6f389896e18ffd26401 | p@chr6:75914944..75914952, - |
| 1.06e-24 | FFCP PHASE2:Hg19::chr6:75914944..75914952,-#_db35fb73a9d4e6f389896e18ffd26401 | p@chr6:75914944..75914952, - |
| 2.95e-24 | FFCP PHASE1:Hg19::chr5:167148342..167148357,+#_cf4a9be16d39f1c6e6d2b45dddf8044c | p1@ENST00000517346 |
| 2.95e-24 | FFCP PHASE2:Hg19::chr5:167148342..167148357,+#_cf4a9be16d39f1c6e6d2b45dddf8044c | p1@ENST00000517346 |
| 3.45e-24 | FFCP PHASE1:Hg19::chr6:75886595..75886610,-#_09a4a329575b21bbc04c9c700fa46895 | p@chr6:75886595..75886610, - |
| 3.45e-24 | FFCP PHASE2:Hg19::chr6:75886595..75886610,-#_09a4a329575b21bbc04c9c700fa46895 | p@chr6:75886595..75886610, - |
| 5.36e-24 | FFCP PHASE2:Hg19::chr3:58021410..58021424,+#_708426bb0d0663669868d54323c4fc50 | p@chr3:58021410..58021424, + |
| 5.36e-24 | FFCP PHASE1:Hg19::chr3:58021410..58021424,+#_708426bb0d0663669868d54323c4fc50 | p@chr3:58021410..58021424, + |
| 8.78e-24 | FFCP PHASE2:Hg19::chr12:88813132..88813143,-#_5c399f627c611421dc0dbba2bbd2056b | p@chr12:88813132..88813143, - |
| 8.78e-24 | FFCP PHASE1:Hg19::chr12:88813132..88813143,-#_5c399f627c611421dc0dbba2bbd2056b | p@chr12:88813132..88813143, - |
| 1.02e-23 | FFCP PHASE2:Hg19::chr1:197886561..197886569,+#_acd7bc584aab3bd559e1a5f991201558 | p10@LHX9 |
| 1.02e-23 | FFCP PHASE1:Hg19::chr1:197886561..197886569,+#_acd7bc584aab3bd559e1a5f991201558 | p10@LHX9 |
| 1.03e-23 | FFCP PHASE2:Hg19::chr7:84122019..84122030,-#_609eecc80d5261124e490299f0b6646e | p18@SEMA3A |
| 1.03e-23 | FFCP PHASE1:Hg19::chr7:84122019..84122030,-#_609eecc80d5261124e490299f0b6646e | p18@SEMA3A |
| 3.29e-23 | FFCP PHASE2:Hg19::chrX:119693827..119693835,-#_27ed7acbedf2fbae45e62d798cf21e90 | p24@CUL4B |
| 3.29e-23 | FFCP PHASE1:Hg19::chrX:119693827..119693835,-#_27ed7acbedf2fbae45e62d798cf21e90 | p24@CUL4B |
