Personal tools

UBERON:0004819: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004819
|alt_id=
|name=kidney epithelium
|namespace=
|def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
|xref=BTO:0000059;;MA:0002846
|is_a=UBERON:0000483;;UBERON:0006554
|synonym="epithelial tissue of kidney" EXACT [OBOL:automatic];;"epithelium of kidney" EXACT [OBOL:automatic];;"kidney epithelial tissue" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004819
|is_a=UBERON:0000483 ;;UBERON:0006554
|is_obsolete=
|located_in=
|located_in=
|name=kidney epithelium
|namespace=
|obo_creation_date=
|part_of=UBERON:0002113
|part_of=UBERON:0002113
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="epithelial tissue of kidney" EXACT [OBOL:automatic];;"epithelium of kidney" EXACT [OBOL:automatic];;"kidney epithelial tissue" EXACT [OBOL:automatic]
|union_of=
|xref=BTO:0000059;;MA:0002846
}}
}}

Revision as of 11:32, 12 September 2014

Name:kidney epithelium
Definition:"An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000059

MA:0002846
Synonyms: "epithelial tissue of kidney" EXACT [OBOL:automatic]
"epithelium of kidney" EXACT [OBOL:automatic]
"kidney epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000483(epithelium),UBERON:0006554(urinary system structure)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0004211 (nephron epithelium),UBERON:0005103 (mesonephric epithelium),UBERON:0007684 (uriniferous tubule),UBERON:0009201 (nephric duct),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004819 (kidney epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71p@chr2:693380..693398, +
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71p@chr2:693380..693398, +
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9p4@Spink12
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2cp4@MEGF11
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2cp4@MEGF11
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4p4@PAX2
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4p4@PAX2
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136p7@HOXA10
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136p7@HOXA10
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186p3@PAX2
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186p3@PAX2
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0cp@chr1:1100457..1100470, +
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0cp@chr1:1100457..1100470, +
3.28e-58FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:156829476..156829504, +
3.28e-58FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Acad8
3.28e-58FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:67453354..67453365, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21378296..21378303, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:156048695..156048707, +
3.28e-58FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:75798114..75798125, -
3.28e-58FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379437..31379448, +
3.28e-58FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr17:24670830..24670845, +
3.28e-58FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:75304900..75304907, +
3.28e-58FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr10:85390145..85390153, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Gm6792
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr12:114385720..114385732, -
3.28e-58FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chr13:21380610..21380620,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21380610..21380620, -
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp19@Clu
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr12:104945515..104945524, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:26719400..26719404, -
3.28e-58FFCP PHASE1:Mm9::chr1:90155966..90155989,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:90155966..90155989, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:90155923..90155932, +
3.28e-58FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr18:44319583..44319592, -
3.28e-58FFCP PHASE1:Mm9::chr8:23057222..23057234,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@Defb13
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Atp4a
3.28e-58FFCP PHASE1:Mm9::chr1:155698166..155698174,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:155698166..155698174, -
3.28e-58FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:25706249..25706254, +
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr15:54678902..54678911,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:54678902..54678911, -
3.28e-58FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:63779573..63779582, +
3.28e-58FFCP PHASE1:Mm9::chr9:70779586..70779596,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr19:17585885..17585901,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr19:17585885..17585901, -
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21379322..21379338, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp11@Wars
3.28e-58FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr7:151927980..151927988, +
3.28e-58FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@ENSMUST00000152401
3.28e-58FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr12:16664708..16664723, +
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:20419453..20419476, +
3.28e-58FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:160573108..160573123, +
3.28e-58FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21378968..21378988, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21379125..21379144, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Defb20
3.28e-58FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101958876..101958883, +
3.28e-58FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:103837894..103837900, +
3.28e-58FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:89597725..89597743, +
3.28e-58FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp6@Lcn12
3.28e-58FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:75798097..75798101, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:96150839..96150842, -
3.28e-58FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:147624258..147624285, -
3.28e-58FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:110773795..110773801, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:35930667..35930691, +
3.28e-58FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr18:46301295..46301302, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21378766..21378781, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379845..31379855, +
3.28e-58FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Wfdc11
3.28e-58FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:75347689..75347703, +
3.28e-58FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:52712765..52712772, +
3.28e-58FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Eddm3b
3.28e-58FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:66513886..66513897, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp6@Defb20
3.28e-58FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:63611214..63611229, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:19141429..19141440, +
3.28e-58FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:75329148..75329155, +
3.28e-58FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:25752228..25752237, +
3.28e-58FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004819&oldid=3274378"