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{{UBERON
{{UBERON
|id=UBERON:0004875
|alt_id=
|name=nephrogenic cord
|namespace=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003
|is_a=UBERON:0005423
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
|comment=part_of or develops_from urogenital ridge?
|comment=part_of or develops_from urogenital ridge?
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0004876
|develops_from=UBERON:0004876
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004875
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=nephrogenic cord
|namespace=
|obo_creation_date=
|part_of=UBERON:0000922
|part_of=UBERON:0000922
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
|union_of=
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003
}}
}}

Revision as of 11:32, 12 September 2014

Name:nephrogenic cord
Definition:"a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
Xrefs:
links:

FMA:72168
ncithesaurus:Nephrogenic_Cord

SCTID:361405003
Synonyms: "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
Comments:part_of or develops_from urogenital ridge?

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0004876(urogenital ridge)
part_of:UBERON:0000922(embryo)



Children

part of:UBERON:0005754 (rostral part of nephrogenic cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
4.54e-44FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:11079838..11079844, +
4.54e-44FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:167480413..167480463, -
4.54e-44FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_2c808356ccd804cd36d69a04f78b05bep15@Pgap2
4.54e-44FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31377177..31377184, +
4.54e-44FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141471..19141518, -
4.54e-44FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:24270118..24270122, -
4.54e-44FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21378871..21378901, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379972..31379981, +
4.54e-44FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21381141..21381155, -
4.54e-44FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:164787162..164787188, -
4.54e-44FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_2c808356ccd804cd36d69a04f78b05bep3@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:74440187..74440209, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379372..21379404, +
4.54e-44FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:110773718..110773729, +
4.54e-44FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:126604677..126604701, -
4.54e-44FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_2c808356ccd804cd36d69a04f78b05bep1@ENSMUST00000139012, p1@uc008uqo.1
4.54e-44FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:50280181..50280192, +
4.54e-44FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_2c808356ccd804cd36d69a04f78b05bep2@ENSMUST00000152401
4.54e-44FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_2c808356ccd804cd36d69a04f78b05bep5@Rnase12
4.54e-44FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21378927..21378932, -
4.54e-44FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89597660..89597668, +
4.54e-44FFCP PHASE2:Mm9::chr11:101959194..101959224,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:101959194..101959224, -
4.54e-44FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_2c808356ccd804cd36d69a04f78b05bep1@9230113P08Rik
4.54e-44FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379377..31379384, +
4.54e-44FFCP PHASE1:Mm9::chr4:150092027..150092070,-#_2c808356ccd804cd36d69a04f78b05bep@chr4:150092027..150092070, -
4.54e-44FFCP PHASE2:Mm9::chr8:113585667..113585673,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:113585667..113585673, -
4.54e-44FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:65941913..65941923, -
4.54e-44FFCP PHASE1:Mm9::chr8:23057222..23057234,+#_2c808356ccd804cd36d69a04f78b05bep1@Defb13
4.54e-44FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:164434157..164434162, -
4.54e-44FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89597834..89597840, +
4.54e-44FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_2c808356ccd804cd36d69a04f78b05bep5@Defb43
4.54e-44FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_2c808356ccd804cd36d69a04f78b05bep@chr4:40010825..40010844, -
4.54e-44FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:100634942..100634968, +
4.54e-44FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_2c808356ccd804cd36d69a04f78b05bep@chr10:127470322..127470326, +
4.54e-44FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87936238..87936249, +
4.54e-44FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:130496260..130496269, -
4.54e-44FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:113585714..113585722, -
4.54e-44FFCP PHASE2:Mm9::chr2:152302768..152302774,+#_2c808356ccd804cd36d69a04f78b05bep4@Defb20
4.54e-44FFCP PHASE2:Mm9::chr9:26610184..26610191,-#_2c808356ccd804cd36d69a04f78b05bep4@Glb1l2
4.54e-44FFCP PHASE2:Mm9::chr2:25349402..25349409,-#_2c808356ccd804cd36d69a04f78b05bep3@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_2c808356ccd804cd36d69a04f78b05bep4@9230110F15Rik
4.54e-44FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_2c808356ccd804cd36d69a04f78b05bep@chr15:54678983..54678995, -
4.54e-44FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:20817297..20817313, +
4.54e-44FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:66521865..66521876, +
4.54e-44FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_2c808356ccd804cd36d69a04f78b05bep2@Gm6040, p2@LOC100503992
4.54e-44FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:25678985..25679033, +
4.54e-44FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87922962..87922982, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379118..21379120, -
4.54e-44FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:52712744..52712754, +
4.54e-44FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_2c808356ccd804cd36d69a04f78b05bep@chr12:114385720..114385732, -
4.54e-44FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155697874..155697885, -
4.54e-44FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:103276578..103276585, +
4.54e-44FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:96140694..96140720, +
4.54e-44FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_2c808356ccd804cd36d69a04f78b05bep@chr7:151928014..151928021, +
4.54e-44FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:36016859..36016897, +
4.54e-44FFCP PHASE2:Mm9::chr5:110773731..110773753,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:110773731..110773753, +
4.54e-44FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:100634942..100634968, +
4.54e-44FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141471..19141518, -
4.54e-44FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379437..31379448, +
4.54e-44FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_2c808356ccd804cd36d69a04f78b05bep4@Rnase13
4.54e-44FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_2c808356ccd804cd36d69a04f78b05bep@chr17:24865194..24865204, +
4.54e-44FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:21385729..21385768, +

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