CL:0000393: Difference between revisions
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|located_in= | |located_in= | ||
|name=electrically responsive cell | |name=electrically responsive cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:33, 12 September 2014
| Name: | electrically responsive cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A cell whose function is determined by its response to an electric signal." [FB:ma] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000211(electrically active cell) |
|---|
Children
| is a: | CL:0000165 (neuroendocrine cell),CL:0000187 (muscle cell),CL:0000540 (neuron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11281-116I3 (Skeletal Muscle Cells, donor1)
- 11282-116I4 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11281-116I3 (Skeletal Muscle Cells, donor1)
- 11282-116I4 (Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000393 (electrically responsive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.68e-59 | FFCP PHASE1:Mm9::chr8:125944624..125944663,+#_b195397b19b9336fc5a4e7aa78a75a1d | p@chr8:125944624..125944663, + |
| 7.68e-59 | FFCP PHASE2:Mm9::chr8:125944624..125944663,+#_b195397b19b9336fc5a4e7aa78a75a1d | p@chr8:125944624..125944663, + |
| 2.59e-51 | FFCP PHASE1:Mm9::chr7:109167666..109167667,+#_c52c2654ff31a87ec179041c63a8a078 | p@chr7:109167666..109167667, + |
| 2.59e-51 | FFCP PHASE2:Mm9::chr7:109167666..109167667,+#_c52c2654ff31a87ec179041c63a8a078 | p@chr7:109167666..109167667, + |
| 1.25e-48 | FFCP PHASE2:Mm9::chr9:107659863..107659866,-#_687c7f30674d8233ce795399c22d0919 | p@chr9:107659863..107659866, - |
| 1.25e-48 | FFCP PHASE1:Mm9::chr9:107659863..107659866,-#_687c7f30674d8233ce795399c22d0919 | p@chr9:107659863..107659866, - |
| 4.57e-48 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_e9cde102487a4a4a394d0b4040fb3fa7 | p@chr6:53359400..53359406, + |
| 4.57e-48 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_e9cde102487a4a4a394d0b4040fb3fa7 | p@chr6:53359400..53359406, + |
| 3.21e-47 | FFCP PHASE1:Mm9::chr11:99071307..99071313,-#_3759689f9d2face821eaa7a4af2b7da2 | p@chr11:99071307..99071313, - |
| 3.21e-47 | FFCP PHASE2:Mm9::chr11:99071307..99071313,-#_3759689f9d2face821eaa7a4af2b7da2 | p@chr11:99071307..99071313, - |
| 6.42e-46 | FFCP PHASE2:Mm9::chr3:55849731..55849735,-#_ed22c923f2a86ba85e5680de12e1c537 | p@chr3:55849731..55849735, - |
| 6.42e-46 | FFCP PHASE1:Mm9::chr3:55849731..55849735,-#_ed22c923f2a86ba85e5680de12e1c537 | p@chr3:55849731..55849735, - |
| 8.26e-46 | FFCP PHASE1:Mm9::chr14:26427427..26427439,+#_2f8574347dc99db82bf7ce2b7852e327 | p22@Zmiz1 |
| 8.26e-46 | FFCP PHASE2:Mm9::chr14:26427427..26427439,+#_2f8574347dc99db82bf7ce2b7852e327 | p22@Zmiz1 |
| 2.04e-45 | FFCP PHASE1:Mm9::chr13:9279895..9279899,+#_a4ea97ba7c1c2772a60f8630326d24e8 | p@chr13:9279895..9279899, + |
| 2.04e-45 | FFCP PHASE2:Mm9::chr13:9279895..9279899,+#_a4ea97ba7c1c2772a60f8630326d24e8 | p@chr13:9279895..9279899, + |
| 2.16e-44 | FFCP PHASE1:Mm9::chr18:43504798..43504810,-#_46ee69f9fc83bdfb78d0921f7abc0442 | p@chr18:43504798..43504810, - |
| 2.16e-44 | FFCP PHASE2:Mm9::chr18:43504798..43504810,-#_46ee69f9fc83bdfb78d0921f7abc0442 | p@chr18:43504798..43504810, - |
| 7.54e-44 | FFCP PHASE1:Mm9::chr2:87366179..87366201,+#_aff66ce6d86c176e4f2cc0b1e0bbe8c9 | p1@ENSMUST00000167296 |
| 7.54e-44 | FFCP PHASE2:Mm9::chr2:87366179..87366201,+#_aff66ce6d86c176e4f2cc0b1e0bbe8c9 | p1@ENSMUST00000167296 |
| 7.6e-43 | FFCP PHASE2:Mm9::chr16:73045578..73045594,+#_00abec1466f7ae75f52100daadaf3065 | p@chr16:73045578..73045594, + |
| 7.6e-43 | FFCP PHASE1:Mm9::chr16:73045578..73045594,+#_00abec1466f7ae75f52100daadaf3065 | p@chr16:73045578..73045594, + |
| 2.67e-42 | FFCP PHASE1:Mm9::chr7:111031610..111031645,-#_1ee91428ef028b7018c94d6f58490fba | p1@ENSMUST00000120890 |
| 2.67e-42 | FFCP PHASE2:Mm9::chr7:111031610..111031645,-#_1ee91428ef028b7018c94d6f58490fba | p1@ENSMUST00000120890 |
| 3.4e-42 | FFCP PHASE1:Mm9::chr8:125944694..125944740,+#_0c0f68b45c597eda3446d3caaa60bbee | p@chr8:125944694..125944740, + |
| 3.4e-42 | FFCP PHASE2:Mm9::chr8:125944694..125944740,+#_0c0f68b45c597eda3446d3caaa60bbee | p@chr8:125944694..125944740, + |
| 9.71e-42 | FFCP PHASE2:Mm9::chr3:28664288..28664311,-#_93c5abfd42c64376d22a1c60a8ad9409 | p1@LOC100505213 |
| 9.71e-42 | FFCP PHASE1:Mm9::chr3:28664288..28664311,-#_93c5abfd42c64376d22a1c60a8ad9409 | p1@LOC100505213 |
| 4.89e-41 | FFCP PHASE1:Mm9::chr14:40284476..40284479,-#_05661e7ece64167e2e3b5e994005e0f4 | p@chr14:40284476..40284479, - |
| 4.89e-41 | FFCP PHASE2:Mm9::chr14:40284476..40284479,-#_05661e7ece64167e2e3b5e994005e0f4 | p@chr14:40284476..40284479, - |
| 9.42e-41 | FFCP PHASE1:Mm9::chr7:38554684..38554696,-#_520a7d922e30290328d96711dafaf581 | p10@Zfp536 |
| 9.42e-41 | FFCP PHASE2:Mm9::chr7:38554684..38554696,-#_520a7d922e30290328d96711dafaf581 | p10@Zfp536 |
| 4.15e-40 | FFCP PHASE1:Mm9::chr6:118147812..118147826,-#_47fc943a31ef8a907dd5c3fc53eac994 | p4@Ret |
| 4.15e-40 | FFCP PHASE2:Mm9::chr6:118147812..118147826,-#_47fc943a31ef8a907dd5c3fc53eac994 | p4@Ret |
| 4.09e-39 | FFCP PHASE1:Mm9::chr9:75414533..75414538,-#_46a8d1648c67fbb8ac9a2ca6ca9ddbde | p@chr9:75414533..75414538, - |
| 4.09e-39 | FFCP PHASE2:Mm9::chr9:75414533..75414538,-#_46a8d1648c67fbb8ac9a2ca6ca9ddbde | p@chr9:75414533..75414538, - |
| 4.27e-39 | FFCP PHASE2:Mm9::chr13:9277420..9277424,+#_a01d4a44c225fddae15ef4ed64ddbfc4 | p@chr13:9277420..9277424, + |
| 4.27e-39 | FFCP PHASE1:Mm9::chr13:9277420..9277424,+#_a01d4a44c225fddae15ef4ed64ddbfc4 | p@chr13:9277420..9277424, + |
| 6.79e-39 | FFCP PHASE2:Mm9::chr1:24619955..24619958,-#_0efb18c8ddf130f196eb796188c02541 | p1@ENSMUST00000088336 |
| 6.79e-39 | FFCP PHASE1:Mm9::chr1:24619955..24619958,-#_0efb18c8ddf130f196eb796188c02541 | p1@ENSMUST00000088336 |
| 5.18e-38 | FFCP PHASE2:Mm9::chr2:30663055..30663094,-#_da9665bd4eabb77aeb1cc866fa089c0e | p@chr2:30663055..30663094, - |
| 5.18e-38 | FFCP PHASE1:Mm9::chr2:30663055..30663094,-#_da9665bd4eabb77aeb1cc866fa089c0e | p@chr2:30663055..30663094, - |
| 2.92e-37 | FFCP PHASE1:Mm9::chr1:170361398..170361400,-#_5b5cef2c30886d43368599b560319e04 | p@chr1:170361398..170361400, - |
| 2.92e-37 | FFCP PHASE2:Mm9::chr1:170361398..170361400,-#_5b5cef2c30886d43368599b560319e04 | p@chr1:170361398..170361400, - |
| 4.85e-37 | FFCP PHASE1:Mm9::chr6:7933424..7933445,-#_b9651774b39d9eba6aeae065d08336d1 | p1@ENSMUST00000057757 |
| 4.85e-37 | FFCP PHASE2:Mm9::chr6:7933424..7933445,-#_b9651774b39d9eba6aeae065d08336d1 | p1@ENSMUST00000057757 |
| 5.38e-37 | FFCP PHASE1:Mm9::chr13:76079742..76079746,-#_5eaa44c5d22880c983fb2d6b896d6100 | p@chr13:76079742..76079746, - |
| 5.38e-37 | FFCP PHASE2:Mm9::chr13:76079742..76079746,-#_5eaa44c5d22880c983fb2d6b896d6100 | p@chr13:76079742..76079746, - |
| 1.05e-35 | FFCP PHASE1:Mm9::chr5:38550223..38550234,-#_c31c9b3200c131af533f39d10858036c | p@chr5:38550223..38550234, - |
| 1.05e-35 | FFCP PHASE2:Mm9::chr5:38550223..38550234,-#_c31c9b3200c131af533f39d10858036c | p@chr5:38550223..38550234, - |
| 1.19e-35 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_d340b8d6bfc9b9bcf4a040504b2ec9fa | p@chr11:102661517..102661541, - |
| 1.19e-35 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_d340b8d6bfc9b9bcf4a040504b2ec9fa | p@chr11:102661517..102661541, - |
| 3.1e-35 | FFCP PHASE2:Mm9::chr9:57389282..57389286,+#_277c4734fa0a0815a04adcaf5b708950 | p@chr9:57389282..57389286, + |
| 3.1e-35 | FFCP PHASE1:Mm9::chr9:57389282..57389286,+#_277c4734fa0a0815a04adcaf5b708950 | p@chr9:57389282..57389286, + |
| 3.77e-35 | FFCP PHASE2:Mm9::chr17:6106475..6106488,-#_2bc61321e598e8f6eafa5390b9cf62f8 | p@chr17:6106475..6106488, - |
| 3.77e-35 | FFCP PHASE1:Mm9::chr17:6106475..6106488,-#_2bc61321e598e8f6eafa5390b9cf62f8 | p@chr17:6106475..6106488, - |
| 3.99e-35 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_f339961f2a0c78d334e0078dfa8e59f5 | p@chr4:74703497..74703511, + |
| 3.99e-35 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_f339961f2a0c78d334e0078dfa8e59f5 | p@chr4:74703497..74703511, + |
| 7.17e-35 | FFCP PHASE1:Mm9::chr18:43481915..43481945,-#_b7fbc39369a13bcf8c37c28fe6bec925 | p2@uc008euf.1 |
| 7.17e-35 | FFCP PHASE2:Mm9::chr18:43481915..43481945,-#_b7fbc39369a13bcf8c37c28fe6bec925 | p2@uc008euf.1 |
| 7.88e-35 | FFCP PHASE2:Mm9::chr13:99383382..99383414,+#_741cb5f69a4c4e6959f5e5e9d001285d | p@chr13:99383382..99383414, + |
| 7.88e-35 | FFCP PHASE1:Mm9::chr13:99383382..99383414,+#_741cb5f69a4c4e6959f5e5e9d001285d | p@chr13:99383382..99383414, + |
| 8.35e-35 | FFCP PHASE2:Mm9::chr6:118147365..118147366,-#_84a77cdaa634b3de37707f3a01c9ce0a | p5@Ret |
| 8.35e-35 | FFCP PHASE1:Mm9::chr6:118147365..118147366,-#_84a77cdaa634b3de37707f3a01c9ce0a | p5@Ret |
| 1.22e-34 | FFCP PHASE1:Mm9::chr12:28025392..28025407,-#_b1b69300f71261350cf15135e5cceab8 | p@chr12:28025392..28025407, - |
| 1.22e-34 | FFCP PHASE2:Mm9::chr12:28025392..28025407,-#_b1b69300f71261350cf15135e5cceab8 | p@chr12:28025392..28025407, - |
| 1.26e-34 | FFCP PHASE1:Mm9::chr12:55340225..55340232,+#_769ddf471f5dae91123391b4460e651b | p1@ENSMUST00000082671 |
| 1.26e-34 | FFCP PHASE2:Mm9::chr12:55340225..55340232,+#_769ddf471f5dae91123391b4460e651b | p1@ENSMUST00000082671 |
| 1.27e-34 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_988798a7541d7376c8d4934a7ad87e86 | p@chr4:7846444..7846449, - |
| 1.27e-34 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_988798a7541d7376c8d4934a7ad87e86 | p@chr4:7846444..7846449, - |
| 1.32e-34 | FFCP PHASE1:Mm9::chr17:6106489..6106539,-#_eef24ebb1d84b65251738a9c281ddaa7 | p@chr17:6106489..6106539, - |
| 1.32e-34 | FFCP PHASE2:Mm9::chr17:6106489..6106539,-#_eef24ebb1d84b65251738a9c281ddaa7 | p@chr17:6106489..6106539, - |
| 1.35e-34 | FFCP PHASE1:Mm9::chr13:100191678..100191695,-#_59af9b5c949175b2543a79786a43bf3c | p@chr13:100191678..100191695, - |
| 1.35e-34 | FFCP PHASE2:Mm9::chr13:100191678..100191695,-#_59af9b5c949175b2543a79786a43bf3c | p@chr13:100191678..100191695, - |
| 1.95e-34 | FFCP PHASE1:Hg19::chr4:74702666..74702694,+#_481817dca650e26c4722d4bccf185363 | p3@CXCL6 |
| 1.95e-34 | FFCP PHASE2:Hg19::chr4:74702666..74702694,+#_481817dca650e26c4722d4bccf185363 | p3@CXCL6 |
| 2.1e-34 | FFCP PHASE1:Mm9::chr12:52941704..52941726,-#_080a5a5785329886b4a6d2426364dd0b | p@chr12:52941704..52941726, - |
| 2.1e-34 | FFCP PHASE2:Mm9::chr12:52941704..52941726,-#_080a5a5785329886b4a6d2426364dd0b | p@chr12:52941704..52941726, - |
| 6.31e-34 | FFCP PHASE1:Mm9::chr6:146526110..146526114,-#_7fabb330c62707e30d1626bd99bffa68 | p6@4933424B01Rik |
| 6.31e-34 | FFCP PHASE2:Mm9::chr6:146526110..146526114,-#_7fabb330c62707e30d1626bd99bffa68 | p6@4933424B01Rik |
| 1.4e-33 | FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_8e4e68d8ac3e0bcabf76c857a8bcdadc | p2@LRRC17 |
| 1.4e-33 | FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_8e4e68d8ac3e0bcabf76c857a8bcdadc | p2@LRRC17 |
| 1.91e-33 | FFCP PHASE1:Mm9::chr9:49312416..49312430,-#_9b326aea58642a85906db154b06caf9b | p@chr9:49312416..49312430, - |
| 1.91e-33 | FFCP PHASE2:Mm9::chr9:49312416..49312430,-#_9b326aea58642a85906db154b06caf9b | p@chr9:49312416..49312430, - |
| 2.11e-33 | FFCP PHASE1:Mm9::chr10:57504783..57504796,+#_ce9bc09e6f6558de050edf8fa5159cfa | p4@Fabp7 |
| 2.11e-33 | FFCP PHASE2:Mm9::chr10:57504783..57504796,+#_ce9bc09e6f6558de050edf8fa5159cfa | p4@Fabp7 |
| 4.29e-33 | FFCP PHASE2:Mm9::chr8:125941995..125942014,+#_cd9b67df3198bd9682500f535e76b13f | p@chr8:125941995..125942014, + |
| 4.29e-33 | FFCP PHASE1:Mm9::chr8:125941995..125942014,+#_cd9b67df3198bd9682500f535e76b13f | p@chr8:125941995..125942014, + |
| 4.7e-33 | FFCP PHASE1:Mm9::chr18:43514435..43514457,-#_44a513ff7c385b30c2dee48fb5472b7d | p@chr18:43514435..43514457, - |
| 4.7e-33 | FFCP PHASE2:Mm9::chr18:43514435..43514457,-#_44a513ff7c385b30c2dee48fb5472b7d | p@chr18:43514435..43514457, - |
| 4.83e-33 | FFCP PHASE1:Mm9::chr11:104189552..104189556,-#_ec95c47986dbbfee8db4fca416fca76b | p@chr11:104189552..104189556, - |
| 4.83e-33 | FFCP PHASE2:Mm9::chr11:104189552..104189556,-#_ec95c47986dbbfee8db4fca416fca76b | p@chr11:104189552..104189556, - |
| 5.77e-33 | FFCP PHASE2:Hg19::chr4:169059590..169059615,+#_14956cc144e9518b38ed09cac1f3510e | p@chr4:169059590..169059615, + |
| 5.77e-33 | FFCP PHASE1:Hg19::chr4:169059590..169059615,+#_14956cc144e9518b38ed09cac1f3510e | p@chr4:169059590..169059615, + |
| 6.16e-33 | FFCP PHASE2:Mm9::chr6:134489536..134489540,-#_e57b7a1b5e6a8878a55c9c362b5e318b | p@chr6:134489536..134489540, - |
| 6.16e-33 | FFCP PHASE1:Mm9::chr6:134489536..134489540,-#_e57b7a1b5e6a8878a55c9c362b5e318b | p@chr6:134489536..134489540, - |
| 6.37e-33 | FFCP PHASE2:Mm9::chr1:38851929..38851932,-#_a6682fa29eb99e9c83576afce87a8346 | p@chr1:38851929..38851932, - |
| 6.37e-33 | FFCP PHASE1:Mm9::chr1:38851929..38851932,-#_a6682fa29eb99e9c83576afce87a8346 | p@chr1:38851929..38851932, - |
| 1.01e-32 | FFCP PHASE2:Mm9::chr8:87230210..87230227,-#_74f2c5a94371071413a2be0d51a0b21c | p@chr8:87230210..87230227, - |
| 1.01e-32 | FFCP PHASE1:Mm9::chr8:87230210..87230227,-#_74f2c5a94371071413a2be0d51a0b21c | p@chr8:87230210..87230227, - |
