UBERON:0001871: Difference between revisions
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|located_in= | |located_in= | ||
|name=temporal lobe | |name=temporal lobe | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001950 | |part_of=UBERON:0001950 | ||
Latest revision as of 17:21, 12 September 2014
| Name: | temporal lobe | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe." [Wikipedia:Temporal_lobe] | ||
| Xrefs: |
| ||
| Synonyms: |
"lobus temporalis" RELATED LATIN [Wikipedia:Temporal_lobe] "temporal cortex" EXACT [] "temporal neocortex" EXACT [DHB:TCx] | ||
| Alt_id: | UBERON:FMA_61825-MA_0000941 | ||
| Subset: | uberon_slim |
Gray730.png]
200px-Gray730.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0016526(lobe of cerebral hemisphere) |
|---|---|
| part_of: | UBERON:0001950(neocortex) |
Children
| derives from: | FF:0010031 (human temporal lobe - adult sample),FF:0010071 (human temporal lobe - fetal sample) |
|---|---|
| part of: | UBERON:0001876 (amygdala),UBERON:0002771 (middle temporal gyrus),FF:0010071 (human temporal lobe - fetal sample),UBERON:0016538 (cortex of temporal lobe) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
- 10151-102I7 (amygdala, adult, donor10252)
- 10156-103A3 (medial temporal gyrus, adult, donor10252)
- 10167-103B5 (amygdala - adult, donor10196)
- 10183-103D3 (medial temporal gyrus - adult, donor10196)
- 10353-105E2 (medial temporal gyrus, newborn, donor10223)
- 10360-105E9 (amygdala, newborn, donor10223)
- 10376-105G7 (medial temporal gyrus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001871 (temporal lobe), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.5e-64 | FFCP PHASE2:Hg19::chr1:112532954..112532966,-#_748466ef9503a721743328361a204abe | p@chr1:112532954..112532966, - |
| 7.5e-64 | FFCP PHASE1:Hg19::chr1:112532954..112532966,-#_748466ef9503a721743328361a204abe | p@chr1:112532954..112532966, - |
| 4.63e-63 | FFCP PHASE2:Hg19::chr1:87810993..87811005,+#_bbd6c4f91e197d2ec5f914cd1e5da5a5 | p@chr1:87810993..87811005, + |
| 4.63e-63 | FFCP PHASE1:Hg19::chr1:87810993..87811005,+#_bbd6c4f91e197d2ec5f914cd1e5da5a5 | p@chr1:87810993..87811005, + |
| 2.13e-59 | FFCP PHASE2:Hg19::chr20:44881095..44881140,-#_cba86f6900194e8fa3d6982f55cdb7c4 | p@chr20:44881095..44881140, - |
| 2.13e-59 | FFCP PHASE1:Hg19::chr20:44881095..44881140,-#_cba86f6900194e8fa3d6982f55cdb7c4 | p@chr20:44881095..44881140, - |
| 4.76e-57 | FFCP PHASE1:Hg19::chr7:44282202..44282211,-#_d6457bd7b63e3f64881a7320b467f8f3 | p22@CAMK2B |
| 4.76e-57 | FFCP PHASE2:Hg19::chr20:23357397..23357407,-#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr20:23357397..23357407, - |
| 4.76e-57 | FFCP PHASE2:Hg19::chr1:177001748..177001753,-#_d6457bd7b63e3f64881a7320b467f8f3 | p16@ASTN1 |
| 4.76e-57 | FFCP PHASE2:Hg19::chr7:44282202..44282211,-#_d6457bd7b63e3f64881a7320b467f8f3 | p22@CAMK2B |
| 4.76e-57 | FFCP PHASE1:Hg19::chr11:63486158..63486182,+#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr11:63486158..63486182, + |
| 4.76e-57 | FFCP PHASE1:Hg19::chr16:24372933..24372944,+#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr16:24372933..24372944, + |
| 4.76e-57 | FFCP PHASE1:Hg19::chr1:177001748..177001753,-#_d6457bd7b63e3f64881a7320b467f8f3 | p16@ASTN1 |
| 4.76e-57 | FFCP PHASE2:Hg19::chr16:24372933..24372944,+#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr16:24372933..24372944, + |
| 4.76e-57 | FFCP PHASE1:Hg19::chr5:161530948..161530957,+#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr5:161530948..161530957, + |
| 4.76e-57 | FFCP PHASE1:Hg19::chr20:23357397..23357407,-#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr20:23357397..23357407, - |
| 4.76e-57 | FFCP PHASE2:Hg19::chr11:63486158..63486182,+#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr11:63486158..63486182, + |
| 4.76e-57 | FFCP PHASE2:Hg19::chr5:161530948..161530957,+#_d6457bd7b63e3f64881a7320b467f8f3 | p@chr5:161530948..161530957, + |
| 2.5e-54 | FFCP PHASE1:Hg19::chr5:149601723..149601751,-#_e6190d66ea423de0e66990324d680798 | p@chr5:149601723..149601751, - |
| 2.5e-54 | FFCP PHASE2:Hg19::chr8:89554909..89554920,+#_e6190d66ea423de0e66990324d680798 | p3@ENST00000518631 |
| 2.5e-54 | FFCP PHASE2:Hg19::chr5:149601723..149601751,-#_e6190d66ea423de0e66990324d680798 | p@chr5:149601723..149601751, - |
| 2.5e-54 | FFCP PHASE1:Hg19::chr8:89554909..89554920,+#_e6190d66ea423de0e66990324d680798 | p3@ENST00000518631 |
| 3.89e-54 | FFCP PHASE2:Hg19::chr9:101052594..101052627,-#_f8cd889b62f7b7f321a2c4db6180bd8d | p12@GABBR2 |
| 3.89e-54 | FFCP PHASE1:Hg19::chr9:101052594..101052627,-#_f8cd889b62f7b7f321a2c4db6180bd8d | p12@GABBR2 |
| 3.85e-51 | FFCP PHASE1:Hg19::chr11:74047383..74047406,-#_efe2eb2694d17bb751163fbfcac812d2 | p@chr11:74047383..74047406, - |
| 3.85e-51 | FFCP PHASE2:Hg19::chr11:74047383..74047406,-#_efe2eb2694d17bb751163fbfcac812d2 | p@chr11:74047383..74047406, - |
| 8.72e-51 | FFCP PHASE1:Hg19::chr16:19183650..19183662,+#_fca56549ee4501429d685dc8321bd05b | p8@SYT17 |
| 8.72e-51 | FFCP PHASE2:Hg19::chr16:19183650..19183662,+#_fca56549ee4501429d685dc8321bd05b | p8@SYT17 |
| 1.22e-50 | FFCP PHASE2:Hg19::chr9:10612907..10612918,-#_c9b9caf56e65870c3232f52132cf251a | p17@PTPRD |
| 1.22e-50 | FFCP PHASE1:Hg19::chr9:10612907..10612918,-#_c9b9caf56e65870c3232f52132cf251a | p17@PTPRD |
| 1.5e-50 | FFCP PHASE1:Hg19::chr22:42393379..42393386,+#_49db4496759ebb4ba27306e5c06afc58 | p@chr22:42393379..42393386, + |
| 1.5e-50 | FFCP PHASE2:Hg19::chr22:42393379..42393386,+#_49db4496759ebb4ba27306e5c06afc58 | p@chr22:42393379..42393386, + |
| 3.65e-50 | FFCP PHASE1:Hg19::chr3:68056440..68056444,+#_5a07246b8d5dfd14279254cf38e98ccd | p@chr3:68056440..68056444, + |
| 3.65e-50 | FFCP PHASE2:Hg19::chr3:68056440..68056444,+#_5a07246b8d5dfd14279254cf38e98ccd | p@chr3:68056440..68056444, + |
| 1.37e-49 | FFCP PHASE2:Hg19::chr7:154002357..154002364,+#_23c863a8916bfd39ccbcd924159797f0 | p18@DPP6 |
| 1.37e-49 | FFCP PHASE1:Hg19::chr7:154002357..154002364,+#_23c863a8916bfd39ccbcd924159797f0 | p18@DPP6 |
| 8.56e-48 | FFCP PHASE2:Hg19::chr10:10504367..10504380,+#_a2b66eea4796738fd6ffbf8dbd5d90c1 | p@chr10:10504367..10504380, + |
| 8.56e-48 | FFCP PHASE1:Hg19::chr10:10504367..10504380,+#_a2b66eea4796738fd6ffbf8dbd5d90c1 | p@chr10:10504367..10504380, + |
| 9.31e-48 | FFCP PHASE2:Hg19::chr17:1029008..1029023,-#_cd8a7caa02f2c74d820909cc48300c7d | p29@ABR |
| 9.31e-48 | FFCP PHASE1:Hg19::chr17:1029008..1029023,-#_cd8a7caa02f2c74d820909cc48300c7d | p29@ABR |
| 2.01e-47 | FFCP PHASE1:Hg19::chr2:136399311..136399323,+#_c97e86d9d68b67b251eca3583d16053d | p@chr2:136399311..136399323, + |
| 2.01e-47 | FFCP PHASE2:Hg19::chr2:136399311..136399323,+#_c97e86d9d68b67b251eca3583d16053d | p@chr2:136399311..136399323, + |
| 3.57e-47 | FFCP PHASE2:Hg19::chr22:33454349..33454350,-#_f0a9de6427fcea42b980035f59c36460 | p6@SYN3 |
| 3.57e-47 | FFCP PHASE1:Hg19::chr22:33454349..33454350,-#_f0a9de6427fcea42b980035f59c36460 | p6@SYN3 |
| 4.32e-47 | FFCP PHASE1:Hg19::chr11:20792354..20792385,+#_9fe32e546d1b2433ab99b0decca46be6 | p3@NELL1 |
| 4.32e-47 | FFCP PHASE2:Hg19::chr11:20792354..20792385,+#_9fe32e546d1b2433ab99b0decca46be6 | p3@NELL1 |
| 1.25e-45 | FFCP PHASE1:Hg19::chr3:113023157..113023168,-#_b5fd7f46779a6f78a83b3ae7cdb4a1c6 | p4@WDR52 |
| 1.25e-45 | FFCP PHASE2:Hg19::chr3:113023157..113023168,-#_b5fd7f46779a6f78a83b3ae7cdb4a1c6 | p4@WDR52 |
| 1.41e-45 | FFCP PHASE1:Hg19::chr11:99941186..99941205,+#_f34fa235d986f97ff446c7beff67bce6 | p5@CNTN5 |
| 1.41e-45 | FFCP PHASE2:Hg19::chr11:99941186..99941205,+#_f34fa235d986f97ff446c7beff67bce6 | p5@CNTN5 |
| 2.5e-45 | FFCP PHASE2:Hg19::chr10:116887377..116887393,+#_1526ed818014beced436f1bab54df1b9 | p@chr10:116887377..116887393, + |
| 2.5e-45 | FFCP PHASE1:Hg19::chr10:116887377..116887393,+#_1526ed818014beced436f1bab54df1b9 | p@chr10:116887377..116887393, + |
| 8.57e-45 | FFCP PHASE2:Hg19::chr17:1028996..1029007,-#_3297587e148eaf36e9092af682593ef0 | p30@ABR |
| 8.57e-45 | FFCP PHASE1:Hg19::chr17:1028996..1029007,-#_3297587e148eaf36e9092af682593ef0 | p30@ABR |
| 1.93e-44 | FFCP PHASE2:Hg19::chr2:163696032..163696047,-#_993ecbba29215708e98d681fb4bfc37a | p@chr2:163696032..163696047, - |
| 1.93e-44 | FFCP PHASE1:Hg19::chr2:163696032..163696047,-#_993ecbba29215708e98d681fb4bfc37a | p@chr2:163696032..163696047, - |
| 5.21e-44 | FFCP PHASE2:Hg19::chr1:6219455..6219466,+#_1b618c05e25e40f792b491011706803a | p@chr1:6219455..6219466, + |
| 5.21e-44 | FFCP PHASE1:Hg19::chr1:6219455..6219466,+#_1b618c05e25e40f792b491011706803a | p@chr1:6219455..6219466, + |
| 6.76e-44 | FFCP PHASE2:Hg19::chr13:33780283..33780296,-#_cfd69cb2740d64e4df0dd7d8a2f24e21 | p11@STARD13 |
| 6.76e-44 | FFCP PHASE1:Hg19::chr13:33780283..33780296,-#_cfd69cb2740d64e4df0dd7d8a2f24e21 | p11@STARD13 |
| 3.87e-43 | FFCP PHASE2:Hg19::chr6:80131778..80131795,+#_4fb7b2c47708db5d7ce7f51fe600cccc | p@chr6:80131778..80131795, + |
| 3.87e-43 | FFCP PHASE1:Hg19::chr6:80131778..80131795,+#_4fb7b2c47708db5d7ce7f51fe600cccc | p@chr6:80131778..80131795, + |
| 5.22e-43 | FFCP PHASE2:Hg19::chr13:67802549..67802564,-#_36c52c2228ec340611ffcb3ee1e3080c | p1@AB384392 |
| 5.22e-43 | FFCP PHASE1:Hg19::chr13:67802549..67802564,-#_36c52c2228ec340611ffcb3ee1e3080c | p1@AB384392 |
| 6.03e-43 | FFCP PHASE1:Hg19::chr10:102089952..102089973,-#_efc627821515cec69665f62acfee3838 | p2@PKD2L1 |
| 6.03e-43 | FFCP PHASE2:Hg19::chr10:102089952..102089973,-#_efc627821515cec69665f62acfee3838 | p2@PKD2L1 |
| 1.07e-42 | FFCP PHASE2:Hg19::chr6:69345368..69345379,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77 | p7@BAI3 |
| 1.07e-42 | FFCP PHASE1:Hg19::chr13:53938493..53938506,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77 | p@chr13:53938493..53938506, + |
| 1.07e-42 | FFCP PHASE1:Hg19::chr6:69345368..69345379,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77 | p7@BAI3 |
| 1.07e-42 | FFCP PHASE2:Hg19::chr13:53938493..53938506,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77 | p@chr13:53938493..53938506, + |
| 1.77e-42 | FFCP PHASE2:Hg19::chr3:131756595..131756614,-#_6697be7ae545281bae7ff613639fdb4a | p4@CPNE4 |
| 1.77e-42 | FFCP PHASE1:Hg19::chr3:131756595..131756614,-#_6697be7ae545281bae7ff613639fdb4a | p4@CPNE4 |
| 2.13e-42 | FFCP PHASE2:Hg19::chr12:49932864..49932871,+#_4577fa1f371c3bd5d7d9f1f50885505a | p3@KCNH3 |
| 2.13e-42 | FFCP PHASE1:Hg19::chr12:49932864..49932871,+#_4577fa1f371c3bd5d7d9f1f50885505a | p3@KCNH3 |
| 2.72e-42 | FFCP PHASE2:Hg19::chr19:19356203..19356221,+#_90603eec0cebc9a26cd9573f6d42ad89 | p@chr19:19356203..19356221, + |
| 2.72e-42 | FFCP PHASE1:Hg19::chr19:19356203..19356221,+#_90603eec0cebc9a26cd9573f6d42ad89 | p@chr19:19356203..19356221, + |
| 2.92e-42 | FFCP PHASE2:Hg19::chr7:107302587..107302611,-#_f87e9c591abf6f69f8e47ea100983844 | p1@ENST00000449741 |
| 2.92e-42 | FFCP PHASE1:Hg19::chr7:107302587..107302611,-#_f87e9c591abf6f69f8e47ea100983844 | p1@ENST00000449741 |
| 3.86e-42 | FFCP PHASE2:Hg19::chr11:62702172..62702193,+#_906d016b2c3741094a0ae4a011e145d9 | p@chr11:62702172..62702193, + |
| 3.86e-42 | FFCP PHASE1:Hg19::chr11:62702172..62702193,+#_906d016b2c3741094a0ae4a011e145d9 | p@chr11:62702172..62702193, + |
| 4.19e-42 | FFCP PHASE2:Hg19::chr12:131201033..131201041,-#_fc188ef9094b391eec99b707bdea5724 | p3@RIMBP2 |
| 4.19e-42 | FFCP PHASE1:Hg19::chr12:131201033..131201041,-#_fc188ef9094b391eec99b707bdea5724 | p3@RIMBP2 |
| 4.57e-42 | FFCP PHASE2:Hg19::chr20:3176551..3176567,-#_91ec7edca2c232b1ad8421ba95f8d64e | p@chr20:3176551..3176567, - |
| 4.57e-42 | FFCP PHASE1:Hg19::chr1:59011498..59011517,+#_91ec7edca2c232b1ad8421ba95f8d64e | p@chr1:59011498..59011517, + |
| 4.57e-42 | FFCP PHASE1:Hg19::chr20:3176551..3176567,-#_91ec7edca2c232b1ad8421ba95f8d64e | p@chr20:3176551..3176567, - |
| 4.57e-42 | FFCP PHASE2:Hg19::chr1:59011498..59011517,+#_91ec7edca2c232b1ad8421ba95f8d64e | p@chr1:59011498..59011517, + |
| 6.98e-42 | FFCP PHASE1:Hg19::chr14:76241843..76241862,+#_2ae6a3c4bed591bc0b84091f163c232e | p@chr14:76241843..76241862, + |
| 6.98e-42 | FFCP PHASE2:Hg19::chr14:76241843..76241862,+#_2ae6a3c4bed591bc0b84091f163c232e | p@chr14:76241843..76241862, + |
| 7.59e-42 | FFCP PHASE2:Hg19::chr7:55433055..55433064,+#_39a33ec6d1a9f1d9f6ddfd43fca7d534 | p12@LANCL2 |
| 7.59e-42 | FFCP PHASE1:Hg19::chr7:55433055..55433064,+#_39a33ec6d1a9f1d9f6ddfd43fca7d534 | p12@LANCL2 |
| 8.85e-42 | FFCP PHASE1:Hg19::chr20:34810219..34810231,+#_6fc2a3f482c63864c5519b5ce171fab7 | p@chr20:34810219..34810231, + |
| 8.85e-42 | FFCP PHASE2:Hg19::chr20:34810219..34810231,+#_6fc2a3f482c63864c5519b5ce171fab7 | p@chr20:34810219..34810231, + |
| 8.99e-42 | FFCP PHASE2:Hg19::chr7:38574745..38574756,-#_95b0bfd582297430425b611b4654eaf0 | p@chr7:38574745..38574756, - |
| 8.99e-42 | FFCP PHASE1:Hg19::chr7:38574745..38574756,-#_95b0bfd582297430425b611b4654eaf0 | p@chr7:38574745..38574756, - |
| 1.06e-41 | FFCP PHASE2:Hg19::chr12:13708919..13708933,-#_33b4e20e034a438234cef88e6c000896 | p@chr12:13708919..13708933, - |
| 1.06e-41 | FFCP PHASE1:Hg19::chr12:13708919..13708933,-#_33b4e20e034a438234cef88e6c000896 | p@chr12:13708919..13708933, - |
| 1.34e-41 | FFCP PHASE2:Hg19::chr12:120240554..120240562,-#_3ffc07a2947989dbcf92684104761bb7 | p@chr12:120240554..120240562, - |
| 1.34e-41 | FFCP PHASE1:Hg19::chr12:120240554..120240562,-#_3ffc07a2947989dbcf92684104761bb7 | p@chr12:120240554..120240562, - |
| 1.49e-41 | FFCP PHASE1:Hg19::chr5:149602704..149602720,-#_1ae5bbbdfe26ae64d589e3166a5244e3 | p@chr5:149602704..149602720, - |
| 1.49e-41 | FFCP PHASE2:Hg19::chr5:149602704..149602720,-#_1ae5bbbdfe26ae64d589e3166a5244e3 | p@chr5:149602704..149602720, - |
