UBERON:0002061: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=truncus arteriosus | |name=truncus arteriosus | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004145;;UBERON:0005498 | |part_of=UBERON:0004145;;UBERON:0005498 | ||
Latest revision as of 17:25, 12 September 2014
| Name: | truncus arteriosus | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles." [Wikipedia:Truncus_arteriosus_(embryology)] | ||
| Xrefs: |
| ||
| Comments: | AO notes: assume spelling error for ncit | ||
| Alt_id: | UBERON:FMA_70301-MA_0000103 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0001637(artery),UBERON:0002050(embryonic structure),UBERON:0003498(heart blood vessel),UBERON:0010314(structure with developmental contribution from neural crest) |
|---|---|
| develops_from: | UBERON:0005432(aortic sac) |
| part_of: | UBERON:0004145(outflow tract),UBERON:0005498(primitive heart tube) |
Children
| develops from: | UBERON:0002012 (pulmonary artery) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002061 (truncus arteriosus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_ad6051299615e83e1313840dfcefe9ff | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_ad6051299615e83e1313840dfcefe9ff | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_ad6051299615e83e1313840dfcefe9ff | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_ad6051299615e83e1313840dfcefe9ff | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_ad6051299615e83e1313840dfcefe9ff | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_ad6051299615e83e1313840dfcefe9ff | p@chr8:90366581..90366594, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_1f10934da48d02e2cf9b7517a89545c3 | p@chr4:70707556..70707558, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_1f10934da48d02e2cf9b7517a89545c3 | p@chr4:70707556..70707558, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_d6c6643704dbc54971fd15789654501b | p@chr8:120651826..120651840, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_d6c6643704dbc54971fd15789654501b | p14@FAS |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_d6c6643704dbc54971fd15789654501b | p26@LINC00340 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_d6c6643704dbc54971fd15789654501b | p@chr8:120651826..120651840, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_d6c6643704dbc54971fd15789654501b | p@chr3:158928407..158928414, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_d6c6643704dbc54971fd15789654501b | p@chrX:23072856..23072859, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_d6c6643704dbc54971fd15789654501b | p14@FAS |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_d6c6643704dbc54971fd15789654501b | p26@LINC00340 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_d6c6643704dbc54971fd15789654501b | p@chr3:158928407..158928414, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_d6c6643704dbc54971fd15789654501b | p@chrX:23072856..23072859, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_250696c108abf54d9cf3aa67fc318251 | p@chr4:70707608..70707615, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_250696c108abf54d9cf3aa67fc318251 | p@chr4:70707608..70707615, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_bab0863db28c0ed560fa519ae733b79c | p@chr11:131614903..131614910, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_bab0863db28c0ed560fa519ae733b79c | p@chr3:156258392..156258395, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_bab0863db28c0ed560fa519ae733b79c | p@chr4:70690584..70690589, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_bab0863db28c0ed560fa519ae733b79c | p@chr17:76824975..76824978, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_bab0863db28c0ed560fa519ae733b79c | p@chr11:131614903..131614910, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_bab0863db28c0ed560fa519ae733b79c | p@chr3:156258392..156258395, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_bab0863db28c0ed560fa519ae733b79c | p@chr4:70690584..70690589, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_bab0863db28c0ed560fa519ae733b79c | p@chr17:76824975..76824978, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p13@PTGIS |
| 7.05e-34 | FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chrX:140904171..140904173, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr4:24645959..24645967, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr13:38136724..38136726, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr8:134047162..134047169, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr9:16059821..16059828, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr7:22687639..22687644, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr1:176668544..176668553, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p1@CACNG8 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr7:18834859..18834879, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr1:93043102..93043113, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr4:38147484..38147500, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chrX:140904171..140904173, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p19@AMOTL1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr13:38136724..38136726, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr8:134047162..134047169, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p1@ENST00000406333 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr9:16059821..16059828, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p13@PTGIS |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr7:22687639..22687644, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr4:24645959..24645967, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p1@CACNG8 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr1:176668544..176668553, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr4:38147484..38147500, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr1:93043102..93043113, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p19@AMOTL1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p@chr7:18834859..18834879, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_ddb60b20b1cb73bcb7be32e06a7a13f9 | p1@ENST00000406333 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_2fc50f094f4d2c092266de3538c337e1 | p@chr9:33797893..33797903, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_2fc50f094f4d2c092266de3538c337e1 | p@chr9:33797893..33797903, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_2da8e42d939c2345de2ccd1893f4d935 | p1@ENST00000492301 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_2da8e42d939c2345de2ccd1893f4d935 | p16@HMGA1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr4:891819..891820,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr4:891819..891820, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_2da8e42d939c2345de2ccd1893f4d935 | p1@SNORD105 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr8:123580995..123581003, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr17:61995172..61995199, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_2da8e42d939c2345de2ccd1893f4d935 | p16@HMGA1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_2da8e42d939c2345de2ccd1893f4d935 | p@chr18:65175930..65175941, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_2da8e42d939c2345de2ccd1893f4d935 | p13@RAB11FIP5 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr19:15509437..15509442, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_2da8e42d939c2345de2ccd1893f4d935 | p1@ENST00000492301 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr4:891819..891820,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr4:891819..891820, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr8:123580995..123581003, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_2da8e42d939c2345de2ccd1893f4d935 | p1@SNORD105 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr17:61995172..61995199, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_2da8e42d939c2345de2ccd1893f4d935 | p@chr18:65175930..65175941, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_2da8e42d939c2345de2ccd1893f4d935 | p13@RAB11FIP5 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_2da8e42d939c2345de2ccd1893f4d935 | p@chr19:15509437..15509442, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr19:681941..681952,+#_9282de27a36784ada1abfbd0a7a2235a | p@chr19:681941..681952, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr1:185703364..185703371, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_9282de27a36784ada1abfbd0a7a2235a | p@chr6:148593641..148593643, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr2:238116338..238116342, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr9:33797981..33798005, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_9282de27a36784ada1abfbd0a7a2235a | p1@ENST00000521989 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr15:71371688..71371691, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_9282de27a36784ada1abfbd0a7a2235a | p@chr4:74392579..74392583, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr5:146890197..146890224, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr2:84316409..84316414, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr3:11675748..11675759,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr3:11675748..11675759, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_9282de27a36784ada1abfbd0a7a2235a | p28@ANK2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_9282de27a36784ada1abfbd0a7a2235a | p5@BC031228 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:94712896..94712909,+#_9282de27a36784ada1abfbd0a7a2235a | p10@FAM92A1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr2:238116338..238116342, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr1:185703364..185703371,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr1:185703364..185703371, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr19:681941..681952,+#_9282de27a36784ada1abfbd0a7a2235a | p@chr19:681941..681952, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_9282de27a36784ada1abfbd0a7a2235a | p@chr6:148593641..148593643, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr9:33797981..33798005, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr3:11675748..11675759, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_9282de27a36784ada1abfbd0a7a2235a | p@chr5:146890197..146890224, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_9282de27a36784ada1abfbd0a7a2235a | p1@ENST00000521989 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_9282de27a36784ada1abfbd0a7a2235a | p28@ANK2 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_9282de27a36784ada1abfbd0a7a2235a | p@chr4:74392579..74392583, + |
