UBERON:0003103: Difference between revisions
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|located_in= | |located_in= | ||
|name=compound organ | |name=compound organ | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:38, 12 September 2014
| Name: | compound organ | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [CARO:0000024] | ||
| Xrefs: |
| ||
| Synonyms: | "organ" RELATED [] | ||
| Alt_id: | UBERON:XAO_0003041-ZFA_0000496 | ||
| Subset: |
organ_slim upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ) |
|---|
Children
| is a: | UBERON:0000489 (cavitated compound organ),UBERON:0001005 (respiratory airway),UBERON:0010056 (future tongue),UBERON:0015228 (circulatory organ) |
|---|---|
| part of: | UBERON:0000471 (compound organ component) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10016-101C7 (heart, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10046-101G1 (heart, fetal, pool1)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10056-101H2 (spinal cord, fetal, donor1)
- 10058-101H4 (trachea, fetal, donor1)
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10016-101C7 (heart, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10046-101G1 (heart, fetal, pool1)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10056-101H2 (spinal cord, fetal, donor1)
- 10058-101H4 (trachea, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003103 (compound organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.48e-35 | FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_0beeec9b973048ea204a788ea3e89731 | p@chr1:137737483..137737497, - |
| 4.48e-35 | FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_0beeec9b973048ea204a788ea3e89731 | p@chr1:137737483..137737497, - |
| 1.3e-34 | FFCP PHASE2:Mm9::chr5:72895739..72895759,-#_ca8e892ac34523759771f4a50be162ad | p4@Corin |
| 1.3e-34 | FFCP PHASE1:Mm9::chr5:72895739..72895759,-#_ca8e892ac34523759771f4a50be162ad | p4@Corin |
| 1.5e-33 | FFCP PHASE1:Hg19::chr17:77018953..77018966,+#_e0b9bfbf7b471058b4bf858e39e487ed | p@chr17:77018953..77018966, + |
| 1.5e-33 | FFCP PHASE2:Hg19::chr17:77018953..77018966,+#_e0b9bfbf7b471058b4bf858e39e487ed | p@chr17:77018953..77018966, + |
| 3.72e-33 | FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_39540eccc3443fe98f8b4c26bf35e7df | p@chr9:24549775..24549776, - |
| 3.72e-33 | FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_39540eccc3443fe98f8b4c26bf35e7df | p@chr5:58108164..58108178, + |
| 3.72e-33 | FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_39540eccc3443fe98f8b4c26bf35e7df | p@chr1:137747392..137747402, - |
| 3.72e-33 | FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_39540eccc3443fe98f8b4c26bf35e7df | p@chr5:58108164..58108178, + |
| 3.72e-33 | FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_39540eccc3443fe98f8b4c26bf35e7df | p@chr4:147375434..147375447, + |
| 3.72e-33 | FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_39540eccc3443fe98f8b4c26bf35e7df | p@chr9:24549775..24549776, - |
| 3.72e-33 | FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_39540eccc3443fe98f8b4c26bf35e7df | p@chr4:147375434..147375447, + |
| 3.72e-33 | FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_39540eccc3443fe98f8b4c26bf35e7df | p@chr1:137747392..137747402, - |
| 4.24e-32 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_88add7654c2f457efe63f0c4b1ae097c | p4@PAX2 |
| 4.24e-32 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_88add7654c2f457efe63f0c4b1ae097c | p4@PAX2 |
| 1.08e-31 | FFCP PHASE1:Mm9::chr1:137747348..137747368,+#_07169f417335e7b8d8c2a8467c1c973e | p@chr1:137747348..137747368, + |
| 1.08e-31 | FFCP PHASE2:Mm9::chr1:137747348..137747368,+#_07169f417335e7b8d8c2a8467c1c973e | p@chr1:137747348..137747368, + |
| 1.12e-31 | FFCP PHASE2:Mm9::chr6:97879802..97879816,+#_26a609c3b0a4aa613dfd829b5410433c | p5@Mitf |
| 1.12e-31 | FFCP PHASE1:Mm9::chr6:97879802..97879816,+#_26a609c3b0a4aa613dfd829b5410433c | p5@Mitf |
| 2.09e-31 | FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_912aa307fdb54113f25c1cacb201d0ca | p@chr4:140980456..140980463, + |
| 2.09e-31 | FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_912aa307fdb54113f25c1cacb201d0ca | p@chr4:140980456..140980463, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55584272..55584298, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744668..137744681, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744668..137744681, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137743272..137743307, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55586837..55586880, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55568937..55568988, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744333..137744352, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137747289..137747313, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55572120..55572173, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55568790..55568803, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137747382..137747385, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55563577..55563611, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55581579..55581620, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr19:36193772..36193793, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr18:65553662..65553675,-#_d362cd1c14ce086f2ce0877fdd6a128f | p2@Alpk2 |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55571909..55571953, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744550..137744565, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_d362cd1c14ce086f2ce0877fdd6a128f | p2@Mov10l1 |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55579265..55579297, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744611..137744621, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744636..137744654, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137747953..137747967, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_d362cd1c14ce086f2ce0877fdd6a128f | p2@Mov10l1 |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55584197..55584239, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr5:120286706..120286736, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744333..137744352, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55572120..55572173, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55568737..55568746, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137747289..137747313, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55584197..55584239, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55565785..55565833, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr11:58815923..58815951, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55568937..55568988, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55581579..55581620, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55568790..55568803, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr4:140980347..140980352,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr4:140980347..140980352, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137743272..137743307, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55584663..55584731, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137745434..137745445, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744550..137744565, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr18:65553662..65553675,-#_d362cd1c14ce086f2ce0877fdd6a128f | p2@Alpk2 |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55584663..55584731, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137747382..137747385, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr11:65461897..65461929, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr4:147375901..147375913, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr5:120286706..120286736, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55579265..55579297, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744636..137744654, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr11:65461897..65461929, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55571909..55571953, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr4:140980347..140980352,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr4:140980347..140980352, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137747953..137747967, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55584272..55584298, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55565785..55565833, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr4:147375901..147375913, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55563577..55563611, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr11:58815923..58815951, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137745434..137745445, + |
| 3.03e-31 | FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr19:36193772..36193793, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr1:137744611..137744621, + |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55586837..55586880, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_d362cd1c14ce086f2ce0877fdd6a128f | p@chr14:55568737..55568746, - |
| 3.06e-31 | FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_54300780f244d46cdcf505eaf287e412 | p@chr12:113728951..113728965, + |
| 3.06e-31 | FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_54300780f244d46cdcf505eaf287e412 | p@chr12:113728951..113728965, + |
| 3.21e-31 | FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_6b28463fd55b38b0bd8facc0e01c3989 | p@chr19:36187511..36187515, - |
| 3.21e-31 | FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_6b28463fd55b38b0bd8facc0e01c3989 | p@chr4:147375200..147375220, + |
| 3.21e-31 | FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_6b28463fd55b38b0bd8facc0e01c3989 | p@chr4:147375200..147375220, + |
| 3.21e-31 | FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_6b28463fd55b38b0bd8facc0e01c3989 | p@chr19:36187511..36187515, - |
| 7.8e-31 | FFCP PHASE2:Hg19::chr17:77019002..77019027,+#_1078399d4c1891ff96110231886ebb8e | p@chr17:77019002..77019027, + |
| 7.8e-31 | FFCP PHASE1:Hg19::chr17:77019002..77019027,+#_1078399d4c1891ff96110231886ebb8e | p@chr17:77019002..77019027, + |
| 8.51e-30 | FFCP PHASE2:Mm9::chr4:140978538..140978554,-#_072ab4a2ce34acbd90fedc5817fcd486 | p@chr4:140978538..140978554, - |
| 8.51e-30 | FFCP PHASE1:Mm9::chr4:140978538..140978554,-#_072ab4a2ce34acbd90fedc5817fcd486 | p@chr4:140978538..140978554, - |
| 1.08e-29 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_25239b76cc45a7e24fb8041489efc583 | p3@PAX2 |
| 1.08e-29 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_25239b76cc45a7e24fb8041489efc583 | p3@PAX2 |
| 1.59e-29 | FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_e54122f6abaf0589ca83438ca33493ff | p@chr1:137742152..137742184, - |
| 1.59e-29 | FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_e54122f6abaf0589ca83438ca33493ff | p@chr1:137742152..137742184, - |
| 1.59e-29 | FFCP PHASE2:Mm9::chrX:156380854..156380877,+#_e54122f6abaf0589ca83438ca33493ff | p15@Sh3kbp1 |
| 1.59e-29 | FFCP PHASE1:Mm9::chrX:156380854..156380877,+#_e54122f6abaf0589ca83438ca33493ff | p15@Sh3kbp1 |
