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|located_in=
|located_in=
|name=gastrointestinal system mesentery
|name=gastrointestinal system mesentery
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0005409
|part_of=UBERON:0005409

Latest revision as of 17:48, 12 September 2014

Name:gastrointestinal system mesentery
Namespace:FANTOM
Definition:"A mesentery that is part of a digestive system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001900
Synonyms: "digestive system mesentery" EXACT [OBOL:automatic]
"mesentery of digestive system" EXACT [OBOL:automatic]
"mesentery of gastrointestinal system" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002095(mesentery),UBERON:0004782(gastrointestinal system serosa)
part_of:UBERON:0005409(gastrointestinal system)



Children

is a:UBERON:0003281 (mesentery of stomach)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004854 (gastrointestinal system mesentery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_0c2a957a1ba5e15da49b8c66805787c6p3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_0c2a957a1ba5e15da49b8c66805787c6p7@GDPD2
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_0c2a957a1ba5e15da49b8c66805787c6p19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_0c2a957a1ba5e15da49b8c66805787c6p5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_0c2a957a1ba5e15da49b8c66805787c6p@chr17:78171885..78171900, +
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_0c2a957a1ba5e15da49b8c66805787c6p@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_0c2a957a1ba5e15da49b8c66805787c6p1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_0c2a957a1ba5e15da49b8c66805787c6p10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_0c2a957a1ba5e15da49b8c66805787c6p11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_0c2a957a1ba5e15da49b8c66805787c6p1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_0c2a957a1ba5e15da49b8c66805787c6p8@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_0c2a957a1ba5e15da49b8c66805787c6p21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859608..56859619, -
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_0c2a957a1ba5e15da49b8c66805787c6p7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_0c2a957a1ba5e15da49b8c66805787c6p2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_0c2a957a1ba5e15da49b8c66805787c6p2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_0c2a957a1ba5e15da49b8c66805787c6p4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_0c2a957a1ba5e15da49b8c66805787c6p@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_0c2a957a1ba5e15da49b8c66805787c6p60@SYNE1
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_0c2a957a1ba5e15da49b8c66805787c6p12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_0c2a957a1ba5e15da49b8c66805787c6p18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr15:95561320..95561328, -
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:1891326..1891337, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_0c2a957a1ba5e15da49b8c66805787c6p2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_0c2a957a1ba5e15da49b8c66805787c6p7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_0c2a957a1ba5e15da49b8c66805787c6p3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_0c2a957a1ba5e15da49b8c66805787c6p17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_0c2a957a1ba5e15da49b8c66805787c6p8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_0c2a957a1ba5e15da49b8c66805787c6p1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_0c2a957a1ba5e15da49b8c66805787c6p12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_0c2a957a1ba5e15da49b8c66805787c6p19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_0c2a957a1ba5e15da49b8c66805787c6p10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_0c2a957a1ba5e15da49b8c66805787c6p5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_0c2a957a1ba5e15da49b8c66805787c6p1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_0c2a957a1ba5e15da49b8c66805787c6p11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_0c2a957a1ba5e15da49b8c66805787c6p@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_0c2a957a1ba5e15da49b8c66805787c6p1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr9:127260615..127260651, -
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_0c2a957a1ba5e15da49b8c66805787c6p21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_0c2a957a1ba5e15da49b8c66805787c6p2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_0c2a957a1ba5e15da49b8c66805787c6p2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_0c2a957a1ba5e15da49b8c66805787c6p@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_0c2a957a1ba5e15da49b8c66805787c6p7@CD5L
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_0c2a957a1ba5e15da49b8c66805787c6p18@AIF1L
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_0c2a957a1ba5e15da49b8c66805787c6p@chr16:84218794..84218800, +
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_0c2a957a1ba5e15da49b8c66805787c6p2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_0c2a957a1ba5e15da49b8c66805787c6p4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_0c2a957a1ba5e15da49b8c66805787c6p17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_0c2a957a1ba5e15da49b8c66805787c6p60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_0c2a957a1ba5e15da49b8c66805787c6p@chr11:56859603..56859606, -
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_51c1646ac3102a4b96fe045e658c33c9p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_51c1646ac3102a4b96fe045e658c33c9p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_51c1646ac3102a4b96fe045e658c33c9p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_51c1646ac3102a4b96fe045e658c33c9p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_51c1646ac3102a4b96fe045e658c33c9p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_51c1646ac3102a4b96fe045e658c33c9p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_51c1646ac3102a4b96fe045e658c33c9p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_51c1646ac3102a4b96fe045e658c33c9p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_51c1646ac3102a4b96fe045e658c33c9p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_51c1646ac3102a4b96fe045e658c33c9p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_51c1646ac3102a4b96fe045e658c33c9p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_51c1646ac3102a4b96fe045e658c33c9p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_51c1646ac3102a4b96fe045e658c33c9p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_51c1646ac3102a4b96fe045e658c33c9p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_51c1646ac3102a4b96fe045e658c33c9p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_51c1646ac3102a4b96fe045e658c33c9p@chr11:56859722..56859732, -
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_4f02bb98345a531dcb83099d329633f1p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_4f02bb98345a531dcb83099d329633f1p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_4f02bb98345a531dcb83099d329633f1p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_4f02bb98345a531dcb83099d329633f1p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_4f02bb98345a531dcb83099d329633f1p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_4f02bb98345a531dcb83099d329633f1p6@IL34
9.74e-88FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_4f02bb98345a531dcb83099d329633f1p19@TRHDE
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_4f02bb98345a531dcb83099d329633f1p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_4f02bb98345a531dcb83099d329633f1p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_4f02bb98345a531dcb83099d329633f1p19@TRHDE

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