UBERON:0010364: Difference between revisions
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|located_in= | |located_in= | ||
|name=dermal skeleton | |name=dermal skeleton | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:09, 12 September 2014
| Name: | dermal skeleton | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements." [VSAO:0000035] | ||
| Xrefs: |
| ||
| Synonyms: |
"dermal skeletal system" RELATED [VSAO:curator] "dermoskeleton" RELATED [VSAO:curator] "desmoskeleton" RELATED [VSAO:curator] "exoskeleton" BROAD [VSAO:curator] | ||
| Comments: | This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0010912(subdivision of skeleton) |
|---|
Children
| part of: | UBERON:0003113 (dermatocranium),UBERON:0008907 (dermal bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010364 (dermal skeleton), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_9f8ddde6c79874b4f3b10cb4b7463c37 | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_9f8ddde6c79874b4f3b10cb4b7463c37 | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_e4ab642b3d91985d51eb87be396c331f | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_e4ab642b3d91985d51eb87be396c331f | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_e4ab642b3d91985d51eb87be396c331f | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_e4ab642b3d91985d51eb87be396c331f | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_e4ab642b3d91985d51eb87be396c331f | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_e4ab642b3d91985d51eb87be396c331f | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_e4ab642b3d91985d51eb87be396c331f | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_e4ab642b3d91985d51eb87be396c331f | p13@C17orf67 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_6f720d0105e4464b7e45c9a931c8821b | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_6f720d0105e4464b7e45c9a931c8821b | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_6f720d0105e4464b7e45c9a931c8821b | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_6f720d0105e4464b7e45c9a931c8821b | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_b50d4e805aec7995bad6f50965516ee8 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_b50d4e805aec7995bad6f50965516ee8 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_8c2afac1912b00ea38891beeb54a06c3 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_8c2afac1912b00ea38891beeb54a06c3 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_8c2afac1912b00ea38891beeb54a06c3 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_8c2afac1912b00ea38891beeb54a06c3 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_8c2afac1912b00ea38891beeb54a06c3 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_8c2afac1912b00ea38891beeb54a06c3 | p9@C17orf67 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_92c57890dee49b5d3217886d187f2e23 | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_92c57890dee49b5d3217886d187f2e23 | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_5e8cf187fe88aa68b4df2cafbecf0f8f | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_5e8cf187fe88aa68b4df2cafbecf0f8f | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_5e8cf187fe88aa68b4df2cafbecf0f8f | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_5e8cf187fe88aa68b4df2cafbecf0f8f | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_5e8cf187fe88aa68b4df2cafbecf0f8f | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_5e8cf187fe88aa68b4df2cafbecf0f8f | p7@ALX1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_720b2e06fdb5a37caf4e9f256b8a16bb | p23@FLT1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_720b2e06fdb5a37caf4e9f256b8a16bb | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_720b2e06fdb5a37caf4e9f256b8a16bb | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_720b2e06fdb5a37caf4e9f256b8a16bb | p@chr2:33519090..33519092, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_1ef8f90c58514c1ed12f6d485354f5c3 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_1ef8f90c58514c1ed12f6d485354f5c3 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_1ef8f90c58514c1ed12f6d485354f5c3 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_1ef8f90c58514c1ed12f6d485354f5c3 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_1ef8f90c58514c1ed12f6d485354f5c3 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_1ef8f90c58514c1ed12f6d485354f5c3 | p@chr8:57353779..57353790, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_01e90da7f6f8266da00851d7faae200e | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_01e90da7f6f8266da00851d7faae200e | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_01e90da7f6f8266da00851d7faae200e | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_01e90da7f6f8266da00851d7faae200e | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_01e90da7f6f8266da00851d7faae200e | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_01e90da7f6f8266da00851d7faae200e | p12@FAM65C |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_b2ef63791b27ab22b7bf1474026d7bfc | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_b2ef63791b27ab22b7bf1474026d7bfc | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_b2ef63791b27ab22b7bf1474026d7bfc | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_b2ef63791b27ab22b7bf1474026d7bfc | p@chr16:67687543..67687559, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_69c7c26f2b5be4f4295a79e204ccc110 | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_69c7c26f2b5be4f4295a79e204ccc110 | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_69c7c26f2b5be4f4295a79e204ccc110 | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_69c7c26f2b5be4f4295a79e204ccc110 | p@chr6:46190219..46190230, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_f937a306de2fba045477d5bc79a5af4a | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_f937a306de2fba045477d5bc79a5af4a | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_f937a306de2fba045477d5bc79a5af4a | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_f937a306de2fba045477d5bc79a5af4a | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_f937a306de2fba045477d5bc79a5af4a | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_f937a306de2fba045477d5bc79a5af4a | p@chr10:15760985..15760992, - |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_d4c11d4be89cf54544c14b782764a510 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_d4c11d4be89cf54544c14b782764a510 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_bcc2f27a6ff75d50848f6a06857a1a8e | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_bcc2f27a6ff75d50848f6a06857a1a8e | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_a441384d2082bc297edd3380107d3ca0 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_a441384d2082bc297edd3380107d3ca0 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_a441384d2082bc297edd3380107d3ca0 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_a441384d2082bc297edd3380107d3ca0 | p@chr8:57353676..57353688, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_02dfb8d21a4ea335f610412a711de0bc | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_02dfb8d21a4ea335f610412a711de0bc | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_02dfb8d21a4ea335f610412a711de0bc | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_02dfb8d21a4ea335f610412a711de0bc | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_02dfb8d21a4ea335f610412a711de0bc | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_02dfb8d21a4ea335f610412a711de0bc | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_a7761f2eb878c3b347aa4a9cf9cfabeb | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_a7761f2eb878c3b347aa4a9cf9cfabeb | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_a7761f2eb878c3b347aa4a9cf9cfabeb | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_a7761f2eb878c3b347aa4a9cf9cfabeb | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_a7761f2eb878c3b347aa4a9cf9cfabeb | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_a7761f2eb878c3b347aa4a9cf9cfabeb | p@chr8:57354360..57354367, + |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_324a6be27eb20629f408a17c73d35597 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_324a6be27eb20629f408a17c73d35597 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_324a6be27eb20629f408a17c73d35597 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_324a6be27eb20629f408a17c73d35597 | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_69d19c689434ada8c00a7743514e5c14 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_69d19c689434ada8c00a7743514e5c14 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_69d19c689434ada8c00a7743514e5c14 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_69d19c689434ada8c00a7743514e5c14 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_69d19c689434ada8c00a7743514e5c14 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_69d19c689434ada8c00a7743514e5c14 | p@chrX:132670143..132670152, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_7471d21b8636a8be1c7e21d7d415b5bc | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_7471d21b8636a8be1c7e21d7d415b5bc | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_e6447f24fa4e2d9d2426a1693898ca60 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_e6447f24fa4e2d9d2426a1693898ca60 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_e6447f24fa4e2d9d2426a1693898ca60 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_e6447f24fa4e2d9d2426a1693898ca60 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_e6447f24fa4e2d9d2426a1693898ca60 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_e6447f24fa4e2d9d2426a1693898ca60 | p@chr8:57359975..57359992, - |
| 4.2e-29 | FFCP PHASE1:Hg19::chr15:52606315..52606320,-#_1b168629e9c702f3dc4dfcb7b08bb736 | p@chr15:52606315..52606320, - |
| 4.2e-29 | FFCP PHASE1:Hg19::chr10:28033565..28033575,-#_1b168629e9c702f3dc4dfcb7b08bb736 | p@chr10:28033565..28033575, - |
