FFCP PHASE1:Hg19::chr12:47182487..47182490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47182487..47182490,- | |||
|coexpression_cluster_id=C1670 | |coexpression_cluster_id=C1670 | ||
|description=CAGE_peak_at_chr12:47182487..47182490,- | |description=CAGE_peak_at_chr12:47182487..47182490,- | ||
Latest revision as of 08:43, 24 July 2015
| Short description: | p@chr12:47182487..47182490, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr12:47182487..47182490, - |
| Coexpression cluster: | C1670_Urothelial_Mallassezderived_squamous_Gingival_Mammary_oral_Keratinocyte |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr12:47182487..47182490- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of Malassez | 2.21e-43 | 3 |
| general ecto-epithelial cell | 7.71e-36 | 14 |
| duct epithelial cell | 5.37e-20 | 3 |
| branched duct epithelial cell | 5.37e-20 | 3 |
| tracheal epithelial cell | 5.37e-20 | 3 |
| gingival epithelial cell | 5.37e-20 | 3 |
| tracheoblast | 5.37e-20 | 3 |
| respiratory epithelial cell | 7.33e-18 | 13 |
| ecto-epithelial cell | 1.13e-14 | 34 |
| epidermal cell | 1.67e-14 | 9 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| jaw skeleton | 9.55e-33 | 4 |
| splanchnocranium | 9.55e-33 | 4 |
| primary subdivision of cranial skeletal system | 2.35e-26 | 5 |
| protuberance | 4.36e-22 | 6 |
| pharyngeal arch | 4.36e-22 | 6 |
| embryonic head | 4.36e-22 | 6 |
| gingival epithelium | 5.37e-20 | 3 |
| cranial skeletal system | 2.39e-12 | 11 |
| axial skeletal system | 7.95e-10 | 14 |
| trachea | 4.04e-09 | 7 |
Showing 1 to 10 of 27 entries
