FFCP PHASE1:Hg19::chr12:94853631..94853680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=51134 | |EntrezGene=entrezgene:51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17966 | |HGNC=HGNC:17966 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9Y592 | |UniProt=uniprot:Q9Y592 | ||
|association_with_transcript=41bp_to_ENST00000339839_5end | |association_with_transcript=41bp_to_ENST00000339839_5end | ||
|cluster_id=chr12:94853631..94853680,- | |||
|description=CAGE_peak_1_at_CCDC41_5end | |description=CAGE_peak_1_at_CCDC41_5end | ||
|id=chr12:94853631..94853680,- | |id=chr12:94853631..94853680,- | ||
Revision as of 13:45, 24 July 2015
| Short description: | p1@CCDC41 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CCDC41_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 41bp_to_ENST00000339839_5end |
| EntrezGene: | 51134 |
| HGNC: | 17966 |
| UniProt: | Q9Y592 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CCDC41 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 1.17e-17 | 53 |
| common lymphoid progenitor | 1.17e-17 | 53 |
| lymphoid lineage restricted progenitor cell | 3.99e-17 | 52 |
| hematopoietic stem cell | 2.36e-13 | 168 |
| hematopoietic cell | 1.85e-12 | 177 |
| hematopoietic oligopotent progenitor cell | 7.83e-12 | 161 |
| hematopoietic multipotent progenitor cell | 7.83e-12 | 161 |
| lymphocyte of B lineage | 1.20e-10 | 24 |
| pro-B cell | 1.20e-10 | 24 |
| T cell | 1.69e-08 | 25 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 1.43e-21 | 235 |
| disease of cellular proliferation | 1.70e-20 | 239 |
| hematologic cancer | 1.53e-18 | 51 |
| immune system cancer | 1.53e-18 | 51 |
| organ system cancer | 7.47e-17 | 137 |
| leukemia | 8.09e-14 | 39 |
| myeloid leukemia | 1.65e-11 | 31 |
| cell type cancer | 2.16e-09 | 143 |
| carcinoma | 8.29e-07 | 106 |
Showing 1 to 9 of 9 entries
