FFCP PHASE1:Hg19::chr17:76123388..76123414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11322 | |EntrezGene=entrezgene:11322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18021 | |HGNC=HGNC:18021 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q7Z403 | |UniProt=uniprot:Q7Z403 | ||
|association_with_transcript=-349bp_to_uc002juj.1_5end | |association_with_transcript=-349bp_to_uc002juj.1_5end | ||
|cluster_id=chr17:76123388..76123414,- | |||
|description=CAGE_peak_9_at_TMC6_5end | |description=CAGE_peak_9_at_TMC6_5end | ||
|id=chr17:76123388..76123414,- | |id=chr17:76123388..76123414,- | ||
Revision as of 21:52, 25 July 2015
| Short description: | p9@TMC6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_TMC6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -349bp_to_uc002juj.1_5end |
| EntrezGene: | 11322 |
| HGNC: | 18021 |
| UniProt: | Q7Z403 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@TMC6 |
|---|
0.0
1.0
2.0
3.0
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 3.95e-12 | 52 |
| lymphocyte | 7.18e-12 | 53 |
| common lymphoid progenitor | 7.18e-12 | 53 |
| T cell | 1.26e-09 | 25 |
| pro-T cell | 1.26e-09 | 25 |
| CD4-positive, alpha-beta thymocyte | 1.84e-08 | 1 |
| naive thymus-derived CD4-positive, alpha-beta T cell | 1.84e-08 | 1 |
| mature CD4 single-positive thymocyte | 1.84e-08 | 1 |
| resting double-positive thymocyte | 1.84e-08 | 1 |
| double-positive blast | 1.84e-08 | 1 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 1.07e-07 | 15 |
| haemolymphatic fluid | 1.07e-07 | 15 |
| organism substance | 1.07e-07 | 15 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| genetic disease | 1.18e-08 | 1 |
| monogenic disease | 1.18e-08 | 1 |
| xeroderma pigmentosum | 1.18e-08 | 1 |
Showing 1 to 3 of 3 entries
