FFCP PHASE1:Hg19::chr21:44082526..44082558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5152 | |EntrezGene=entrezgene:5152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=8795 | |HGNC=HGNC:8795 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q8NCL3 | |UniProt=uniprot:Q8NCL3 | ||
|association_with_transcript=-453bp_to_AK074662_5end | |association_with_transcript=-453bp_to_AK074662_5end | ||
|cluster_id=chr21:44082526..44082558,+ | |||
|coexpression_cluster_id=C2635 | |coexpression_cluster_id=C2635 | ||
|description=CAGE_peak_3_at_PDE9A_5end | |description=CAGE_peak_3_at_PDE9A_5end | ||
Revision as of 18:12, 28 July 2015
| Short description: | p3@PDE9A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_PDE9A_5end |
| Coexpression cluster: | C2635_cerebellum_parietal_retinoblastoma_acute_temporal_occipital_thalamus |
| Association with transcript: | -453bp_to_AK074662_5end |
| EntrezGene: | 5152 |
| HGNC: | 8795 |
| UniProt: | Q8NCL3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@PDE9A |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.47e-52 | 56 |
| neural rod | 1.47e-52 | 56 |
| future spinal cord | 1.47e-52 | 56 |
| neural keel | 1.47e-52 | 56 |
| regional part of nervous system | 5.07e-49 | 53 |
| regional part of brain | 5.07e-49 | 53 |
| regional part of forebrain | 1.93e-39 | 41 |
| forebrain | 1.93e-39 | 41 |
| anterior neural tube | 1.93e-39 | 41 |
| future forebrain | 1.93e-39 | 41 |
Showing 1 to 10 of 69 entries
