FFCP PHASE1:Hg19::chr5:114607144..114607156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=153733 | |EntrezGene=entrezgene:153733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=28599 | |HGNC=HGNC:28599 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=150bp_to_ENST00000502975_5end | |association_with_transcript=150bp_to_ENST00000502975_5end | ||
|cluster_id=chr5:114607144..114607156,- | |||
|coexpression_cluster_id=C282 | |coexpression_cluster_id=C282 | ||
|description=CAGE_peak_9_at_CCDC112_5end | |description=CAGE_peak_9_at_CCDC112_5end | ||
Revision as of 08:51, 30 July 2015
| Short description: | p9@CCDC112 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_CCDC112_5end |
| Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
| Association with transcript: | 150bp_to_ENST00000502975_5end |
| EntrezGene: | 153733 |
| HGNC: | 28599 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p9@CCDC112 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| B-1 B cell | 3.99e-50 | 1 |
| mature B cell | 7.14e-26 | 2 |
| pre-B-II cell | 7.14e-26 | 2 |
| transitional stage B cell | 7.14e-26 | 2 |
| small pre-B-II cell | 7.14e-26 | 2 |
| immature B cell | 7.14e-26 | 2 |
| precursor B cell | 9.46e-18 | 3 |
| plasmacytoid dendritic cell | 1.12e-17 | 3 |
| lymphocyte | 2.52e-09 | 53 |
| common lymphoid progenitor | 2.52e-09 | 53 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| acute leukemia | 1.46e-50 | 1 |
| lymphatic system cancer | 3.99e-50 | 1 |
| lymphosarcoma | 3.99e-50 | 1 |
| lymphoma | 8.54e-21 | 10 |
| hematologic cancer | 1.17e-09 | 51 |
| immune system cancer | 1.17e-09 | 51 |
Showing 1 to 6 of 6 entries
