Personal tools

FFCP PHASE1:Mm9::chr2:118938545..118938618,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=19361|HGNC=|MCL_coexpression_id=49|UniProt=D6RCK1,A3KGI0,Q08297|association_with_transcript=0bp_to_ENSMUST00000110828,ENSMUST00000152327,NM_011234,uc008ltc.1,uc008ltd.1,uc012cbp.1_5end|description=CAGE_peak_1_at_Rad51_5end|id=chr2:118938545..118938618,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=4.48416771893423,2.09385244583617,0.454999239389536,0.30246421130683,0.500895729946347,5.20425742926858,5.13947809310157,0.387369970324729,0.281577444303333,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.699363219351979,18.6541466616771,24.7019826215588,34.9780939064073,1.57731082679119,2.74228867211478,5.09267582157636,4.93251082876205,20.6525178497841,23.2467812333652,2.87986361028132,5.27641346454491,2.29692785646008,4.73838195774982,3.23206849028834,3.42042155021473,6.30075324399827,4.6563407237614,13.3356441426523,9.84103660135312,15.8481681015439,22.2415747208481,31.2521133273966,21.6419517638111,5.02237956884289,13.2827008569046,8.37637990358077,5.29408339227913,5.46436387966757,7.2826552954673,2.64383317748712,1.21652317463417,1.28482726513177,3.12956537739216,1.52617609466313,2.41654801007919,0.388859798148567,2.93971485413261,0,2.34895648480831,2.17608642603403,1.34437519656986,4.63066984864705,1.14613375975503,0,2.02316460859598,1.5869729378161,1.26766280701236,1.35537812827653,0.889294796111139,1.3498495759221,0.988866362566974,2.8419204597844,1.19840044207362,1.92109152660777,6.947204024668,6.34527910158946,5.67877395648731,0,1.32521124570968,4.65465037016825,7.66763768145891,5.51531271966013,0,0.255374676170375,0.307213066512487,1.18697658957174,1.09785172322892,0.52091337055676,0.279182999001381,0,0.61119299110724,1.76777151284201,1.99320353118744,1.4911955666024,1.13589289999776,6.65029728939713,1.15945795480671,1.72084775396277,1.3599426674155,0.539703191637817,0,0,1.82577746171277,7.32850387085648,8.05336614268893,7.0667914902068,4.22530259330042,7.69958864485907,7.64415719119937,7.11066703153331,11.4740251735943,12.92135313923,9.0994400102661,1.25602267690966,4.14300613835475,0.445326417194474,13.7053408145247,4.87144765299426,7.14908041493781,5.12456977878917,3.52766121407114,3.76999773989026,0,0.289198713839823,12.3845477272982,6.47067399789637,12.367125033782,16.0008833534623,1.86391761218122,0,0.83778682725382,6.13096932500619,20.8478316640301,11.3981518888747,23.507992008517,0.149790639404823,0,1.63350657746724,0.695297280769106,0,0,0,8.24898847187562,6.84238338355512,1.76905930903572,0.420883711772948,16.6554166992261,17.7024620413774,14.4049703844279,10.2479276128286,11.2940588591204,11.0177799444971,9.55757590509234,2.58703370739016,17.4610074275602,12.8592134514117,10.5570674498369,10.5213951565236,7.50727572909114,4.179025998266,4.11564272815887,13.733364410476,5.61770549850588,15.6982223339976,13.924011470384,10.9776659443816,8.67746421930056,12.9644684251931,12.5474709860161,9.24791889212798,9.56456099901745,10.9290954032692,6.43856163359086,5.02090972178829,9.2153515951549,3.447516745661,0.648550476366846,1.16959989940266,1.75640092232841,1.07365135008297,0,4.93942139420565,0,8.99131926656051,16.423195291213,15.7920936865098,13.1444810548535,8.67239155880373,6.0042071838115,3.99473814836374,3.32170343081158,4.44687177754829,4.77536896720512,4.17808591286417,3.70431765526328,5.39291645192533,7.5648317456143,4.38110801159608,11.3800740571849,11.9960938240215,5.63538678365402,10.386217720111,6.40043207653165,4.20814919341911,4.48979413582227,1.47610147979602,1.41298855057237,1.48076596706161,0.592905254174298,20.6887931087957,21.8180484575655,18.8884174403277,21.3003127457928,17.6059326619264,12.4766667372896,10.3570609482292,7.45822043165163,13.1789478330279,17.2521847832825,6.69853705803306,4.68056509671841,5.80931419278357,5.56131981917928,0.964887042726734,0.923765950833023,21.6020209418353,14.9927778326664,18.3324692637203,15.9589368836181,7.20276906999808,2.61848004974615,0.780534591431195,6.30540576424764,5.53661724121937,2.39182152986231,0.327726629431476,1.55416483679306,2.16973587872267,0,1.08781136763742,5.4094070032094,3.86311444826625,0.481651769963376,0.35163505977661,7.54100748732707,1.26235463602186,10.4117712407365,5.85658116444958,10.1248996934415,10.0366895140072,7.35235624471901,6.51076020814315,18.6212922770451,7.89090816360542,7.11518000303742,0,1.27746076687442,8.01295216502649,9.44744364250741,2.47455184458803,0,12.1390318077491,21.7672961014621,9.43025398779491,5.31543407185391,4.91896236710284,5.68542244970086,17.4496190149203,17.1118741624666,6.32073515871632,5.27093042874994,6.18813259489121,0.680879211507576,19.2665370613502,11.3835641728824,6.85878512101095,5.85222771019503,8.02659679209317,7.40470592709544,2.43571959291679,12.4376005273766,0.63549621259146,0.220528398054962,3.95727007059552,2.42196640043858,10.9166394119962,7.87857470420701,6.72977688954751,5.53813589596716,0.741701208042039,13.8405413446261,12.1768252098301,17.963869154862,29.0087423787224,25.8352090392738,19.9037010689675,12.918360679533,12.0358248998346,10.7795979567451,1.90934123603023,14.3932877079417,11.9958485604841,13.5006676027252,7.52717865652087,6.33251434863915,7.41753905116514,4.29797969771747,3.40282724579238,4.92536898508813,0,12.9649375897364,15.6992373346178,17.7040584789094,10.6948153589226,10.9785849956071,9.96841140395591,5.04636126176742,14.0620735631466,15.0997455973024,16.1861360953424,14.4015003128933,10.1123558601017,15.8125667926328,13.5578463457572,19.4881234466693,21.4832034800978,13.9076948346885,21.9957672621543,18.0181223152984,20.0923235396814,21.49031947671,18.4511918800418,13.0593560191268,16.644648603777,9.11639837016238,1.13365191807606,30.4120756122469,42.434654176282,29.3798078637137,0.386379188064381,2.62755465631655,2.74727436400898,4.28736758158132,1.00314420807073,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,0,24.4938140298657,13.5668456956351,13.1464876430683,10.6966955510049,14.2536950587028,8.45680138870065,2.44471400581777,7.41726206060019,4.81378814387723,6.06473308233114,8.61829619626815,5.09291121742406,10.6751318515666,6.85069130732101,6.66251439885114,8.09699275181225,6.72129090480162,6.17309505483856,4.94503080963968,6.91834924631667,5.82877729055206,6.56660482789549,9.0605752179982,5.95920308192547,6.86998477031913,7.02301245500915,5.12198324043763,8.94437018888666,8.69146328613515,3.36685362994643,5.93175090620871,8.56988996667402,5.72923460437565,7.90177890048427,7.52335782826451,5.49583271463481,5.84829021113521,3.43793686477277,1.53030665655075,4.85301122062934,7.18790290423307|short_description=p1@Rad51}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19361
|HGNC=
|MCL_coexpression_id=49
|TSSclassifier=NA
|UniProt=uniprot:D6RCK1,uniprot:A3KGI0,uniprot:Q08297
|association_with_transcript=0bp_to_ENSMUST00000110828,ENSMUST00000152327,NM_011234,uc008ltc.1,uc008ltd.1,uc012cbp.1_5end
|cluster_id=chr2:118938545..118938618,+
|description=CAGE_peak_1_at_Rad51_5end
|id=chr2:118938545..118938618,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=4.48416771893423,2.09385244583617,0.454999239389536,0.30246421130683,0.500895729946347,5.20425742926858,5.13947809310157,0.387369970324729,0.281577444303333,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.699363219351979,18.6541466616771,24.7019826215588,34.9780939064073,1.57731082679119,2.74228867211478,5.09267582157636,4.93251082876205,20.6525178497841,23.2467812333652,2.87986361028132,5.27641346454491,2.29692785646008,4.73838195774982,3.23206849028834,3.42042155021473,6.30075324399827,4.6563407237614,13.3356441426523,9.84103660135312,15.8481681015439,22.2415747208481,31.2521133273966,21.6419517638111,5.02237956884289,13.2827008569046,8.37637990358077,5.29408339227913,5.46436387966757,7.2826552954673,2.64383317748712,1.21652317463417,1.28482726513177,3.12956537739216,1.52617609466313,2.41654801007919,0.388859798148567,2.93971485413261,0,2.34895648480831,2.17608642603403,1.34437519656986,4.63066984864705,1.14613375975503,0,2.02316460859598,1.5869729378161,1.26766280701236,1.35537812827653,0.889294796111139,1.3498495759221,0.988866362566974,2.8419204597844,1.19840044207362,1.92109152660777,6.947204024668,6.34527910158946,5.67877395648731,0,1.32521124570968,4.65465037016825,7.66763768145891,5.51531271966013,0,0.255374676170375,0.307213066512487,1.18697658957174,1.09785172322892,0.52091337055676,0.279182999001381,0,0.61119299110724,1.76777151284201,1.99320353118744,1.4911955666024,1.13589289999776,6.65029728939713,1.15945795480671,1.72084775396277,1.3599426674155,0.539703191637817,0,0,1.82577746171277,7.32850387085648,8.05336614268893,7.0667914902068,4.22530259330042,7.69958864485907,7.64415719119937,7.11066703153331,11.4740251735943,12.92135313923,9.0994400102661,1.25602267690966,4.14300613835475,0.445326417194474,13.7053408145247,4.87144765299426,7.14908041493781,5.12456977878917,3.52766121407114,3.76999773989026,0,0.289198713839823,12.3845477272982,6.47067399789637,12.367125033782,16.0008833534623,1.86391761218122,0,0.83778682725382,6.13096932500619,20.8478316640301,11.3981518888747,23.507992008517,0.149790639404823,0,1.63350657746724,0.695297280769106,0,0,0,8.24898847187562,6.84238338355512,1.76905930903572,0.420883711772948,16.6554166992261,17.7024620413774,14.4049703844279,10.2479276128286,11.2940588591204,11.0177799444971,9.55757590509234,2.58703370739016,17.4610074275602,12.8592134514117,10.5570674498369,10.5213951565236,7.50727572909114,4.179025998266,4.11564272815887,13.733364410476,5.61770549850588,15.6982223339976,13.924011470384,10.9776659443816,8.67746421930056,12.9644684251931,12.5474709860161,9.24791889212798,9.56456099901745,10.9290954032692,6.43856163359086,5.02090972178829,9.2153515951549,3.447516745661,0.648550476366846,1.16959989940266,1.75640092232841,1.07365135008297,0,4.93942139420565,0,8.99131926656051,16.423195291213,15.7920936865098,13.1444810548535,8.67239155880373,6.0042071838115,3.99473814836374,3.32170343081158,4.44687177754829,4.77536896720512,4.17808591286417,3.70431765526328,5.39291645192533,7.5648317456143,4.38110801159608,11.3800740571849,11.9960938240215,5.63538678365402,10.386217720111,6.40043207653165,4.20814919341911,4.48979413582227,1.47610147979602,1.41298855057237,1.48076596706161,0.592905254174298,20.6887931087957,21.8180484575655,18.8884174403277,21.3003127457928,17.6059326619264,12.4766667372896,10.3570609482292,7.45822043165163,13.1789478330279,17.2521847832825,6.69853705803306,4.68056509671841,5.80931419278357,5.56131981917928,0.964887042726734,0.923765950833023,21.6020209418353,14.9927778326664,18.3324692637203,15.9589368836181,7.20276906999808,2.61848004974615,0.780534591431195,6.30540576424764,5.53661724121937,2.39182152986231,0.327726629431476,1.55416483679306,2.16973587872267,0,1.08781136763742,5.4094070032094,3.86311444826625,0.481651769963376,0.35163505977661,7.54100748732707,1.26235463602186,10.4117712407365,5.85658116444958,10.1248996934415,10.0366895140072,7.35235624471901,6.51076020814315,18.6212922770451,7.89090816360542,7.11518000303742,0,1.27746076687442,8.01295216502649,9.44744364250741,2.47455184458803,0,12.1390318077491,21.7672961014621,9.43025398779491,5.31543407185391,4.91896236710284,5.68542244970086,17.4496190149203,17.1118741624666,6.32073515871632,5.27093042874994,6.18813259489121,0.680879211507576,19.2665370613502,11.3835641728824,6.85878512101095,5.85222771019503,8.02659679209317,7.40470592709544,2.43571959291679,12.4376005273766,0.63549621259146,0.220528398054962,3.95727007059552,2.42196640043858,10.9166394119962,7.87857470420701,6.72977688954751,5.53813589596716,0.741701208042039,13.8405413446261,12.1768252098301,17.963869154862,29.0087423787224,25.8352090392738,19.9037010689675,12.918360679533,12.0358248998346,10.7795979567451,1.90934123603023,14.3932877079417,11.9958485604841,13.5006676027252,7.52717865652087,6.33251434863915,7.41753905116514,4.29797969771747,3.40282724579238,4.92536898508813,0,12.9649375897364,15.6992373346178,17.7040584789094,10.6948153589226,10.9785849956071,9.96841140395591,5.04636126176742,14.0620735631466,15.0997455973024,16.1861360953424,14.4015003128933,10.1123558601017,15.8125667926328,13.5578463457572,19.4881234466693,21.4832034800978,13.9076948346885,21.9957672621543,18.0181223152984,20.0923235396814,21.49031947671,18.4511918800418,13.0593560191268,16.644648603777,9.11639837016238,1.13365191807606,30.4120756122469,42.434654176282,29.3798078637137,0.386379188064381,2.62755465631655,2.74727436400898,4.28736758158132,1.00314420807073,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,0,24.4938140298657,13.5668456956351,13.1464876430683,10.6966955510049,14.2536950587028,8.45680138870065,2.44471400581777,7.41726206060019,4.81378814387723,6.06473308233114,8.61829619626815,5.09291121742406,10.6751318515666,6.85069130732101,6.66251439885114,8.09699275181225,6.72129090480162,6.17309505483856,4.94503080963968,6.91834924631667,5.82877729055206,6.56660482789549,9.0605752179982,5.95920308192547,6.86998477031913,7.02301245500915,5.12198324043763,8.94437018888666,8.69146328613515,3.36685362994643,5.93175090620871,8.56988996667402,5.72923460437565,7.90177890048427,7.52335782826451,5.49583271463481,5.84829021113521,3.43793686477277,1.53030665655075,4.85301122062934,7.18790290423307
|short_description=p1@Rad51
}}

Revision as of 20:18, 3 August 2015

Short description:p1@Rad51
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rad51_5end
Coexpression cluster:MCL_coexpression_mm9:49
Association with transcript: 0bp_to_ENSMUST00000110828, ENSMUST00000152327, NM_011234, uc008ltc.1, uc008ltd.1, uc012cbp.1_5end
EntrezGene:19361
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rad51

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.70
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A534.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.25
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F96.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C513.71
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C316.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.85
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.51
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C616.66
eyeball, embryo E14.CNhs10521.399-16E217.70
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D410.25
eyeball, neonate N00.CNhs11207.633-15C611.29
eyeball, neonate N01.CNhs11140.1532-43E711.02
eyeball, neonate N02.CNhs11205.1551-44G89.56
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E217.46
forelimb, embryo E12.CNhs10600.359-14H212.86
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I613.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.70
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.92
heart, embryo E11.CNhs10586.331-24E910.98
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I912.96
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E510.93
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I29.22
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I516.42
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D813.14
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E37.56
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I911.38
kidney, embryo E15.CNhs10997.434-16F812.00
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F820.69
liver, embryo E13.CNhs10524.378-3H621.82
liver, embryo E14.CNhs10594.409-16E118.89
liver, embryo E15.CNhs10520.433-16D721.30
liver, embryo E16.CNhs10523.462-17F517.61
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G410.36
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G221.60
lung, embryo E14.CNhs10604.404-26F814.99
lung, embryo E15.CNhs11020.432-17C518.33
lung, embryo E16.CNhs10998.458-17B615.96
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.12
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F221.77
pancreas, embryo E16.CNhs11003.460-26E59.43
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E619.27
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H310.92
skin, neonate N06.CNhs11097.693-20I57.88
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G213.84
spleen, embryo E16.CNhs11035.461-43C112.18
spleen, embryo E18.CNhs11011.1271-21F217.96
spleen, neonate N10.CNhs11116.752-24D129.01
spleen, neonate N20.CNhs11112.824-19H125.84
spleen, neonate N25.CNhs11099.1354-25G319.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.78
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E314.39
stomach, embryo E15.CNhs10603.1252-16G812.00
stomach, embryo E16.CNhs11022.459-17D413.50
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F515.70
testis, embryo E15.CNhs11034.443-27C517.70
testis, embryo E16.CNhs11033.470-26G510.69
testis, embryo E17.CNhs11029.486-18I510.98
testis, embryo E18.CNhs11027.503-18G59.97
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I414.06
testis, neonate N10.CNhs11204.763-44D915.10
testis, neonate N20.CNhs11110.839-18H316.19
testis, neonate N30.CNhs11130.1391-42E214.40
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I213.56
thymus, embryo E16.CNhs11002.456-26C519.49
thymus, embryo E17.CNhs10581.478-18C121.48
thymus, embryo E18.CNhs10595.1273-19G413.91
thymus, neonate N02.CNhs11181.1541-43F822.00
thymus, neonate N03.CNhs11137.2104-43C718.02
thymus, neonate N06.CNhs11197.681-26C420.09
thymus, neonate N07.CNhs11211.713-19D321.49
thymus, neonate N10.CNhs11194.748-24E418.45
thymus, neonate N20.CNhs11186.820-7A213.06
thymus, neonate N25.CNhs11125.1362-25G716.64
thymus, neonate N30.CNhs11132.1393-42G29.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H330.41
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F742.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G529.38
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I824.49
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H213.15
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B114.25
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:118938545..118938618,%2B&oldid=3698338"