FFCP PHASE1:Mm9::chr13:98530587..98530588,-: Difference between revisions
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{{FFCP|EntrezGene=100039740|HGNC=|MCL_coexpression_id=226|UniProt=F5H8M6|association_with_transcript=0bp_to_ENSMUST00000080443_5end|description=CAGE_peak_2_at_Gm10260_5end|id=chr13:98530587..98530588,-|ontology_enrichment_celltype=CL:0000084!7.39e-08!11;CL:0000827!7.39e-08!11;CL:0000838!8.17e-08!12;CL:0000791!1.70e-07!9;CL:0000789!1.70e-07!9;CL:0002420!1.70e-07!9;CL:0002419!1.70e-07!9;CL:0000790!1.70e-07!9;CL:0000624!3.77e-07!8;CL:0000542!7.47e-07!13;CL:0000051!7.47e-07!13|ontology_enrichment_celltype_v019_2=CL:0000893,2.66e-08,6;CL:0002489,2.66e-08,6;CL:0000898,2.66e-08,6;CL:0000809,2.66e-08,6;CL:0000810,2.66e-08,6;CL:0000895,2.66e-08,6;CL:0000808,2.66e-08,6;CL:0000894,2.66e-08,6;CL:0000806,2.66e-08,6;CL:0000807,2.66e-08,6;CL:0000805,2.66e-08,6;CL:0002425,2.66e-08,6;CL:0002436,2.66e-08,6;CL:0002427,2.66e-08,6;CL:0002428,2.66e-08,6;CL:0002429,2.66e-08,6;CL:0002433,2.66e-08,6;CL:0002431,2.66e-08,6;CL:0002432,2.66e-08,6;CL:0002476,8.63e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001153,1.20e-12,1;UBERON:0001045,1.20e-12,1;UBERON:0001155,5.87e-07,2;UBERON:0000059,5.87e-07,2|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.645616617207881,1.40788722151667,2.57470978954193,0.68487187290202,0.638177271962691,0.342401459862411,0.611942816932982,0.666219523631325,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0,0.218025156380447,0,0,0.419959264876088,0,0.167782606057736,0.725362142011344,0.336093799142464,0.514518872071894,0,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0.244981598429908,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.372798891650601,0.075726193333184,0.226714680320357,0,0.860423876981386,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,1.81850203222008,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,9.31958806090611,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0.258703370739016,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0.696710015581316,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0.624075346229121,0,0,0,0.369506380333209,0.37898282354097,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0,0,0,0.433947175744535,1.50791283939272,0,0,0.275936746304732,0,0,1.3114795630134,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.283880170416537,0.35613120733451,0,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0.66183396182839,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0.410843828659309,0.389762468933385,0,0.79472541912506,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0.443971906748129,0.0897138566094757,0,0.19318959403219,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0,0,0,0|short_description=p2@Gm10260}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100039740 | |||
|HGNC= | |||
|MCL_coexpression_id=226 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F5H8M6 | |||
|association_with_transcript=0bp_to_ENSMUST00000080443_5end | |||
|cluster_id=chr13:98530587..98530588,- | |||
|description=CAGE_peak_2_at_Gm10260_5end | |||
|id=chr13:98530587..98530588,- | |||
|ontology_enrichment_celltype=CL:0000084!7.39e-08!11;CL:0000827!7.39e-08!11;CL:0000838!8.17e-08!12;CL:0000791!1.70e-07!9;CL:0000789!1.70e-07!9;CL:0002420!1.70e-07!9;CL:0002419!1.70e-07!9;CL:0000790!1.70e-07!9;CL:0000624!3.77e-07!8;CL:0000542!7.47e-07!13;CL:0000051!7.47e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.66e-08,6;CL:0002489,2.66e-08,6;CL:0000898,2.66e-08,6;CL:0000809,2.66e-08,6;CL:0000810,2.66e-08,6;CL:0000895,2.66e-08,6;CL:0000808,2.66e-08,6;CL:0000894,2.66e-08,6;CL:0000806,2.66e-08,6;CL:0000807,2.66e-08,6;CL:0000805,2.66e-08,6;CL:0002425,2.66e-08,6;CL:0002436,2.66e-08,6;CL:0002427,2.66e-08,6;CL:0002428,2.66e-08,6;CL:0002429,2.66e-08,6;CL:0002433,2.66e-08,6;CL:0002431,2.66e-08,6;CL:0002432,2.66e-08,6;CL:0002476,8.63e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001153,1.20e-12,1;UBERON:0001045,1.20e-12,1;UBERON:0001155,5.87e-07,2;UBERON:0000059,5.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.645616617207881,1.40788722151667,2.57470978954193,0.68487187290202,0.638177271962691,0.342401459862411,0.611942816932982,0.666219523631325,0,0,0.473193248037357,0.274228867211478,0.42438965179803,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0,0.218025156380447,0,0,0.419959264876088,0,0.167782606057736,0.725362142011344,0.336093799142464,0.514518872071894,0,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0.244981598429908,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.372798891650601,0.075726193333184,0.226714680320357,0,0.860423876981386,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,1.81850203222008,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,9.31958806090611,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0.258703370739016,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0.696710015581316,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0.624075346229121,0,0,0,0.369506380333209,0.37898282354097,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0,0,0,0.433947175744535,1.50791283939272,0,0,0.275936746304732,0,0,1.3114795630134,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.283880170416537,0.35613120733451,0,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0.66183396182839,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0.410843828659309,0.389762468933385,0,0.79472541912506,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0.443971906748129,0.0897138566094757,0,0.19318959403219,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p2@Gm10260 | |||
}} |
Revision as of 20:57, 3 August 2015
Short description: | p2@Gm10260 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm10260_5end |
Coexpression cluster: | MCL_coexpression_mm9:226 |
Association with transcript: | 0bp_to_ENSMUST00000080443_5end |
EntrezGene: | 100039740 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 2.66e-08 | 6 |
double negative thymocyte | 2.66e-08 | 6 |
naive T cell | 2.66e-08 | 6 |
double-positive, alpha-beta thymocyte | 2.66e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 2.66e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.66e-08 | 6 |
DN4 thymocyte | 2.66e-08 | 6 |
DN1 thymic pro-T cell | 2.66e-08 | 6 |
DN2 thymocyte | 2.66e-08 | 6 |
DN3 thymocyte | 2.66e-08 | 6 |
immature single positive thymocyte | 2.66e-08 | 6 |
early T lineage precursor | 2.66e-08 | 6 |
mature CD4 single-positive thymocyte | 2.66e-08 | 6 |
resting double-positive thymocyte | 2.66e-08 | 6 |
double-positive blast | 2.66e-08 | 6 |
CD69-positive double-positive thymocyte | 2.66e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 2.66e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.66e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 2.66e-08 | 6 |
bone marrow macrophage | 8.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
caecum | 1.20e-12 | 1 |
midgut | 1.20e-12 | 1 |
colon | 5.87e-07 | 2 |
large intestine | 5.87e-07 | 2 |