FFCP PHASE1:Mm9::chr11:70318816..70318834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=75604|HGNC=|MCL_coexpression_id=191|UniProt=Q91XF2,Q9D8G1|association_with_transcript=40bp_to_NM_029360,uc007jvb.2_5end|description=CAGE_peak_2_at_Tm4sf5_5end|id=chr11:70318816..70318834,+|ontology_enrichment_celltype=CL:0002563!7.10e-08!9;CL:0002251!7.10e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.95e-11,9;CL:0002251,1.95e-11,9;CL:0000239,1.24e-08,6;CL:0000677,1.24e-08,6;CL:0000584,1.24e-08,6;CL:0000075,3.35e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.07e-23!59;UBERON:0000160!7.40e-20!43;UBERON:0000344!1.34e-12!15;UBERON:0001242!6.92e-11!13;UBERON:0000060!6.92e-11!13;UBERON:0001262!6.92e-11!13;UBERON:0004786!6.92e-11!13;UBERON:0001007!1.87e-10!128;UBERON:0001555!1.87e-10!128;UBERON:0007026!1.87e-10!128;UBERON:0004119!2.51e-10!130;UBERON:0000925!2.51e-10!130;UBERON:0006595!2.51e-10!130;UBERON:0004923!1.09e-09!24;UBERON:0004921!2.09e-09!126;UBERON:0004185!2.09e-09!126;UBERON:0003350!7.10e-08!9;UBERON:0004808!7.10e-08!9;UBERON:0001277!7.10e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.32e-35,47;UBERON:0000160,7.60e-31,31;UBERON:0000344,8.11e-19,15;UBERON:0001242,3.88e-16,13;UBERON:0001262,3.88e-16,13;UBERON:0004786,3.88e-16,13;UBERON:0004923,3.57e-14,24;UBERON:0003350,1.95e-11,9;UBERON:0004808,1.95e-11,9;UBERON:0001277,1.95e-11,9;UBERON:0001007,1.62e-09,116;UBERON:0001555,1.62e-09,116;UBERON:0007026,1.62e-09,116;UBERON:0004119,3.84e-09,118;UBERON:0000925,3.84e-09,118;UBERON:0006595,3.84e-09,118;UBERON:0000485,6.93e-09,11;UBERON:0004921,3.05e-08,114|phase1_expression=0,124.235245119613,161.069730743896,66.8445906988094,73.1307765721667,56.2395560904831,69.8501795380622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,177.271604455095,209.680082895393,146.42915084933,132.674694816995,113.337868392778,56.6269789979994,86.9503947671761,63.4149260474171,0.635030673459631,0,0,12.1317680295535,13.1325369833209,9.59595974433135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43266719969378,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0,15.9857431606684,0,0.148442139064825,0.520455980298408,0.913396434936424,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,3.21353458054686,0.578397427679647,0,0,0,0,0,0,0,88.8990552125898,0,0,0,0,0,0,0,0,0,0,1.42575109390443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58261680273288,0,0,0,2.27838349789052,2.34526059981096,0.540186184383045,1.42046841351126,1.18058539048442,1.07986979021165,1.39520366850245,0.268273401399619,0.700592054203017,0.987359099480883,0.656669856316381,0.324275238183423,1.02339991197733,1.09775057645525,0.939444931322602,0,0,149.349289908677,97.3178085321843,2.13288250535234,0.928946687441754,8.50525244725816,20.3700359869576,18.902133726814,29.6751976735592,63.5868942469646,32.2809951259061,15.0801125280162,20.4925166202385,15.5971269695296,64.714997423104,65.2736910621577,81.8470633075449,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.500535317148282,1.17935397067922,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0,0,0.823684239564244,0,0,0.624075346229121,0.252578877947112,0,0,0,1.13694847062291,0.651859905768103,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,3.38324646967785,1.95464351224291,0.824850614862677,0,1.69946445308487,1.81394134178851,0.565815239267694,0.295301892880773,0.614870295887855,9.04499026088774,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,49.2602613904448,0,0,3.714963623338,1.48155621895769,0,0.136694227721025,0,0,0,0,9.54670618015114,2.68885594543965,3.45643094115643,5.61627772273367,4.59994251231831,9.17122767733946,7.01294601201068,9.25718704123762,6.80565449158477,0.129614973291793,0,0,2.69129782879162,3.14371131868485,1.16670713006429,0.904118764344118,0.844780627453891,0.352071715937262,0,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0.39736270956253,0.240390899039938,0,0.100966449948148,0,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0,0,0.965947970160952,0,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,1.94485373654635,0.419226325255965,0.735374033800057,0.666740183404846,1.03017528619447,0.64183841918363,2.52697211763797,1.52087579934144,0.754505365544305,0.842773567228942,0.512201219238954,0.574354689556133,0.952587382566147,1.15884325944855,0.578727661391115,0.412085900803307,1.17759136107518,1.37147700954166,1.24233064311536,1.1921809497366,0.581385666529314,0.752875043322645,0.930760686808441,1.09756783723664,1.57841826862706,1.08643291076689,0.561142271657738,0.830445126869219,0.29551344712669,0.818462086339379,0.929621047115796,0.192906610981141,0,1.63752125911786,2.36358159453128,0,0,0|short_description=p2@Tm4sf5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75604 | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91XF2,uniprot:Q9D8G1 | |||
|association_with_transcript=40bp_to_NM_029360,uc007jvb.2_5end | |||
|cluster_id=chr11:70318816..70318834,+ | |||
|description=CAGE_peak_2_at_Tm4sf5_5end | |||
|id=chr11:70318816..70318834,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.10e-08!9;CL:0002251!7.10e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.95e-11,9;CL:0002251,1.95e-11,9;CL:0000239,1.24e-08,6;CL:0000677,1.24e-08,6;CL:0000584,1.24e-08,6;CL:0000075,3.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.07e-23!59;UBERON:0000160!7.40e-20!43;UBERON:0000344!1.34e-12!15;UBERON:0001242!6.92e-11!13;UBERON:0000060!6.92e-11!13;UBERON:0001262!6.92e-11!13;UBERON:0004786!6.92e-11!13;UBERON:0001007!1.87e-10!128;UBERON:0001555!1.87e-10!128;UBERON:0007026!1.87e-10!128;UBERON:0004119!2.51e-10!130;UBERON:0000925!2.51e-10!130;UBERON:0006595!2.51e-10!130;UBERON:0004923!1.09e-09!24;UBERON:0004921!2.09e-09!126;UBERON:0004185!2.09e-09!126;UBERON:0003350!7.10e-08!9;UBERON:0004808!7.10e-08!9;UBERON:0001277!7.10e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.32e-35,47;UBERON:0000160,7.60e-31,31;UBERON:0000344,8.11e-19,15;UBERON:0001242,3.88e-16,13;UBERON:0001262,3.88e-16,13;UBERON:0004786,3.88e-16,13;UBERON:0004923,3.57e-14,24;UBERON:0003350,1.95e-11,9;UBERON:0004808,1.95e-11,9;UBERON:0001277,1.95e-11,9;UBERON:0001007,1.62e-09,116;UBERON:0001555,1.62e-09,116;UBERON:0007026,1.62e-09,116;UBERON:0004119,3.84e-09,118;UBERON:0000925,3.84e-09,118;UBERON:0006595,3.84e-09,118;UBERON:0000485,6.93e-09,11;UBERON:0004921,3.05e-08,114 | |||
|phase1_expression=0,124.235245119613,161.069730743896,66.8445906988094,73.1307765721667,56.2395560904831,69.8501795380622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,177.271604455095,209.680082895393,146.42915084933,132.674694816995,113.337868392778,56.6269789979994,86.9503947671761,63.4149260474171,0.635030673459631,0,0,12.1317680295535,13.1325369833209,9.59595974433135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43266719969378,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0,15.9857431606684,0,0.148442139064825,0.520455980298408,0.913396434936424,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,3.21353458054686,0.578397427679647,0,0,0,0,0,0,0,88.8990552125898,0,0,0,0,0,0,0,0,0,0,1.42575109390443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58261680273288,0,0,0,2.27838349789052,2.34526059981096,0.540186184383045,1.42046841351126,1.18058539048442,1.07986979021165,1.39520366850245,0.268273401399619,0.700592054203017,0.987359099480883,0.656669856316381,0.324275238183423,1.02339991197733,1.09775057645525,0.939444931322602,0,0,149.349289908677,97.3178085321843,2.13288250535234,0.928946687441754,8.50525244725816,20.3700359869576,18.902133726814,29.6751976735592,63.5868942469646,32.2809951259061,15.0801125280162,20.4925166202385,15.5971269695296,64.714997423104,65.2736910621577,81.8470633075449,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.500535317148282,1.17935397067922,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,0,0,0.823684239564244,0,0,0.624075346229121,0.252578877947112,0,0,0,1.13694847062291,0.651859905768103,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,3.38324646967785,1.95464351224291,0.824850614862677,0,1.69946445308487,1.81394134178851,0.565815239267694,0.295301892880773,0.614870295887855,9.04499026088774,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,49.2602613904448,0,0,3.714963623338,1.48155621895769,0,0.136694227721025,0,0,0,0,9.54670618015114,2.68885594543965,3.45643094115643,5.61627772273367,4.59994251231831,9.17122767733946,7.01294601201068,9.25718704123762,6.80565449158477,0.129614973291793,0,0,2.69129782879162,3.14371131868485,1.16670713006429,0.904118764344118,0.844780627453891,0.352071715937262,0,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0.39736270956253,0.240390899039938,0,0.100966449948148,0,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0,0,0.965947970160952,0,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,1.94485373654635,0.419226325255965,0.735374033800057,0.666740183404846,1.03017528619447,0.64183841918363,2.52697211763797,1.52087579934144,0.754505365544305,0.842773567228942,0.512201219238954,0.574354689556133,0.952587382566147,1.15884325944855,0.578727661391115,0.412085900803307,1.17759136107518,1.37147700954166,1.24233064311536,1.1921809497366,0.581385666529314,0.752875043322645,0.930760686808441,1.09756783723664,1.57841826862706,1.08643291076689,0.561142271657738,0.830445126869219,0.29551344712669,0.818462086339379,0.929621047115796,0.192906610981141,0,1.63752125911786,2.36358159453128,0,0,0 | |||
|short_description=p2@Tm4sf5 | |||
}} |
Revision as of 21:11, 3 August 2015
Short description: | p2@Tm4sf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tm4sf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | 40bp_to_NM_029360, uc007jvb.2_5end |
EntrezGene: | 75604 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.95e-11 | 9 |
epithelial cell of alimentary canal | 1.95e-11 | 9 |
brush border epithelial cell | 1.24e-08 | 6 |
gut absorptive cell | 1.24e-08 | 6 |
enterocyte | 1.24e-08 | 6 |
columnar/cuboidal epithelial cell | 3.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.32e-35 | 47 |
intestine | 7.60e-31 | 31 |
mucosa | 8.11e-19 | 15 |
intestinal mucosa | 3.88e-16 | 13 |
wall of intestine | 3.88e-16 | 13 |
gastrointestinal system mucosa | 3.88e-16 | 13 |
organ component layer | 3.57e-14 | 24 |
epithelium of mucosa | 1.95e-11 | 9 |
gastrointestinal system epithelium | 1.95e-11 | 9 |
intestinal epithelium | 1.95e-11 | 9 |
digestive system | 1.62e-09 | 116 |
digestive tract | 1.62e-09 | 116 |
primitive gut | 1.62e-09 | 116 |
endoderm-derived structure | 3.84e-09 | 118 |
endoderm | 3.84e-09 | 118 |
presumptive endoderm | 3.84e-09 | 118 |
simple columnar epithelium | 6.93e-09 | 11 |
subdivision of digestive tract | 3.05e-08 | 114 |