FFCP PHASE1:Mm9::chr11:70324670..70324684,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70324670..70324684,-|id=chr11:70324670..70324684,-|ontology_enrichment_celltype=CL:0002563!5.06e-17!9;CL:0002251!5.06e-17!9;CL:0000239!5.92e-11!6;CL:0000677!5.92e-11!6;CL:0000212!5.92e-11!6;CL:0000584!5.92e-11!6;CL:0000066!1.73e-10!25;CL:0002076!1.17e-09!15;CL:0000075!2.49e-09!7;CL:0000473!4.27e-09!3;CL:0000627!4.27e-09!3;CL:0000682!4.27e-09!3;CL:0002250!1.05e-07!3;CL:0000223!6.62e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,8.20e-18,3;CL:0000239,8.40e-15,6;CL:0000677,8.40e-15,6;CL:0000584,8.40e-15,6;CL:0000075,1.00e-12,7;CL:0000066,2.61e-10,25;CL:0002563,5.99e-10,9;CL:0002251,5.99e-10,9;CL:0000473,6.14e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.42e-32!15;UBERON:0001242!1.17e-26!13;UBERON:0000060!1.17e-26!13;UBERON:0001262!1.17e-26!13;UBERON:0004786!1.17e-26!13;UBERON:0000160!3.48e-26!43;UBERON:0005409!3.48e-21!59;UBERON:0004923!1.17e-18!24;UBERON:0003350!5.06e-17!9;UBERON:0004808!5.06e-17!9;UBERON:0001277!5.06e-17!9;UBERON:0000485!1.13e-13!11;UBERON:0001007!2.31e-10!128;UBERON:0001555!2.31e-10!128;UBERON:0007026!2.31e-10!128;UBERON:0004119!4.18e-10!130;UBERON:0000925!4.18e-10!130;UBERON:0006595!4.18e-10!130;UBERON:0000331!7.30e-09!3;UBERON:0002116!7.30e-09!3;UBERON:0001204!7.30e-09!3;UBERON:0001168!7.30e-09!3;UBERON:0004921!1.62e-08!126;UBERON:0004185!1.62e-08!126;UBERON:0001962!9.54e-07!2;UBERON:0001961!9.54e-07!2;UBERON:0001744!9.54e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.38e-36,15;UBERON:0001242,3.28e-26,13;UBERON:0001262,3.28e-26,13;UBERON:0004786,3.28e-26,13;UBERON:0004923,5.47e-22,24;UBERON:0000160,7.34e-20,31;UBERON:0000331,2.60e-17,3;UBERON:0002116,2.60e-17,3;UBERON:0001204,2.60e-17,3;UBERON:0001168,2.60e-17,3;UBERON:0002108,3.90e-13,4;UBERON:0001962,9.22e-13,2;UBERON:0001961,9.22e-13,2;UBERON:0001744,9.22e-13,2;UBERON:0005409,1.26e-12,47;UBERON:0003350,5.99e-10,9;UBERON:0004808,5.99e-10,9;UBERON:0001277,5.99e-10,9;UBERON:0002465,8.48e-09,3;UBERON:0000485,3.56e-08,11;UBERON:0003199,3.14e-07,1|phase1_expression=0,1.39590163055744,4.09499315450582,0,1.50268718983904,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,8.71755268055246,9.76194338995534,3.87685796543167,1.72376986148711,3.42042155021473,2.52030129759931,1.55211357458713,0,0,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0,1.14135375667535,0.949058123089023,0.823494773620054,0.502670417600539,0.397912944082302,0,0,1.08069024937347,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:70324670..70324684,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:70324670..70324684,- | |||
|description=CAGE_peak_at_chr11:70324670..70324684,- | |||
|id=chr11:70324670..70324684,- | |||
|ontology_enrichment_celltype=CL:0002563!5.06e-17!9;CL:0002251!5.06e-17!9;CL:0000239!5.92e-11!6;CL:0000677!5.92e-11!6;CL:0000212!5.92e-11!6;CL:0000584!5.92e-11!6;CL:0000066!1.73e-10!25;CL:0002076!1.17e-09!15;CL:0000075!2.49e-09!7;CL:0000473!4.27e-09!3;CL:0000627!4.27e-09!3;CL:0000682!4.27e-09!3;CL:0002250!1.05e-07!3;CL:0000223!6.62e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.20e-18,3;CL:0000239,8.40e-15,6;CL:0000677,8.40e-15,6;CL:0000584,8.40e-15,6;CL:0000075,1.00e-12,7;CL:0000066,2.61e-10,25;CL:0002563,5.99e-10,9;CL:0002251,5.99e-10,9;CL:0000473,6.14e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.42e-32!15;UBERON:0001242!1.17e-26!13;UBERON:0000060!1.17e-26!13;UBERON:0001262!1.17e-26!13;UBERON:0004786!1.17e-26!13;UBERON:0000160!3.48e-26!43;UBERON:0005409!3.48e-21!59;UBERON:0004923!1.17e-18!24;UBERON:0003350!5.06e-17!9;UBERON:0004808!5.06e-17!9;UBERON:0001277!5.06e-17!9;UBERON:0000485!1.13e-13!11;UBERON:0001007!2.31e-10!128;UBERON:0001555!2.31e-10!128;UBERON:0007026!2.31e-10!128;UBERON:0004119!4.18e-10!130;UBERON:0000925!4.18e-10!130;UBERON:0006595!4.18e-10!130;UBERON:0000331!7.30e-09!3;UBERON:0002116!7.30e-09!3;UBERON:0001204!7.30e-09!3;UBERON:0001168!7.30e-09!3;UBERON:0004921!1.62e-08!126;UBERON:0004185!1.62e-08!126;UBERON:0001962!9.54e-07!2;UBERON:0001961!9.54e-07!2;UBERON:0001744!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.38e-36,15;UBERON:0001242,3.28e-26,13;UBERON:0001262,3.28e-26,13;UBERON:0004786,3.28e-26,13;UBERON:0004923,5.47e-22,24;UBERON:0000160,7.34e-20,31;UBERON:0000331,2.60e-17,3;UBERON:0002116,2.60e-17,3;UBERON:0001204,2.60e-17,3;UBERON:0001168,2.60e-17,3;UBERON:0002108,3.90e-13,4;UBERON:0001962,9.22e-13,2;UBERON:0001961,9.22e-13,2;UBERON:0001744,9.22e-13,2;UBERON:0005409,1.26e-12,47;UBERON:0003350,5.99e-10,9;UBERON:0004808,5.99e-10,9;UBERON:0001277,5.99e-10,9;UBERON:0002465,8.48e-09,3;UBERON:0000485,3.56e-08,11;UBERON:0003199,3.14e-07,1 | |||
|phase1_expression=0,1.39590163055744,4.09499315450582,0,1.50268718983904,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,8.71755268055246,9.76194338995534,3.87685796543167,1.72376986148711,3.42042155021473,2.52030129759931,1.55211357458713,0,0,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.793351699990633,0,0,0.257734922644187,0.201683524623343,0,1.14135375667535,0.949058123089023,0.823494773620054,0.502670417600539,0.397912944082302,0,0,1.08069024937347,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:70324670..70324684,- | |||
}} |
Latest revision as of 21:13, 3 August 2015
Short description: | p@chr11:70324670..70324684, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70324670..70324684, - |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.20e-18 | 3 |
brush border epithelial cell | 8.40e-15 | 6 |
gut absorptive cell | 8.40e-15 | 6 |
enterocyte | 8.40e-15 | 6 |
columnar/cuboidal epithelial cell | 1.00e-12 | 7 |
epithelial cell | 2.61e-10 | 25 |
intestinal epithelial cell | 5.99e-10 | 9 |
epithelial cell of alimentary canal | 5.99e-10 | 9 |
defensive cell | 6.14e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.38e-36 | 15 |
intestinal mucosa | 3.28e-26 | 13 |
wall of intestine | 3.28e-26 | 13 |
gastrointestinal system mucosa | 3.28e-26 | 13 |
organ component layer | 5.47e-22 | 24 |
intestine | 7.34e-20 | 31 |
ileal mucosa | 2.60e-17 | 3 |
ileum | 2.60e-17 | 3 |
mucosa of small intestine | 2.60e-17 | 3 |
wall of small intestine | 2.60e-17 | 3 |
small intestine | 3.90e-13 | 4 |
gut-associated lymphoid tissue | 9.22e-13 | 2 |
mucosa-associated lymphoid tissue | 9.22e-13 | 2 |
lymphoid tissue | 9.22e-13 | 2 |
gastrointestinal system | 1.26e-12 | 47 |
epithelium of mucosa | 5.99e-10 | 9 |
gastrointestinal system epithelium | 5.99e-10 | 9 |
intestinal epithelium | 5.99e-10 | 9 |
lymphoid system | 8.48e-09 | 3 |
simple columnar epithelium | 3.56e-08 | 11 |
egg chamber | 3.14e-07 | 1 |