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FFCP PHASE1:Mm9::chr10:116814011..116814034,-: Difference between revisions

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{{FFCP|EntrezGene=432508|HGNC=|MCL_coexpression_id=473|UniProt=Q6NVF9|association_with_transcript=0bp_to_ENSMUST00000069168,NM_001013391,uc007hdd.2,uc007hdf.2,uc007hdg.2_5end|description=CAGE_peak_1_at_Cpsf6_5end|id=chr10:116814011..116814034,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.42e-14!94;UBERON:0007811!5.66e-11!86;UBERON:0003056!5.88e-10!49;UBERON:0000033!8.84e-10!63;UBERON:0002346!6.04e-09!71;UBERON:0003075!6.04e-09!71;UBERON:0007284!6.04e-09!71;UBERON:0000468!7.79e-09!333;UBERON:0000955!1.22e-07!50;UBERON:0006238!1.22e-07!50;UBERON:0004121!2.41e-07!102;UBERON:0000924!2.41e-07!102;UBERON:0006601!2.41e-07!102;UBERON:0001049!2.53e-07!52;UBERON:0005068!2.53e-07!52;UBERON:0006241!2.53e-07!52;UBERON:0007135!2.53e-07!52;UBERON:0000922!2.76e-07!328;UBERON:0002616!3.34e-07!49;UBERON:0001017!3.47e-07!73;UBERON:0005743!3.47e-07!73;UBERON:0003080!4.21e-07!40;UBERON:0000073!7.92e-07!75;UBERON:0001016!7.92e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.96e-10,64;UBERON:0003075,1.96e-10,64;UBERON:0007284,1.96e-10,64;UBERON:0010371,4.27e-10,73;UBERON:0003056,5.88e-10,49;UBERON:0004121,2.83e-08,95;UBERON:0000924,2.83e-08,95;UBERON:0006601,2.83e-08,95;UBERON:0000955,1.08e-07,47;UBERON:0006238,1.08e-07,47;UBERON:0001049,2.53e-07,52;UBERON:0005068,2.53e-07,52;UBERON:0006241,2.53e-07,52;UBERON:0007135,2.53e-07,52;UBERON:0000922,2.81e-07,320;UBERON:0002616,3.01e-07,46;UBERON:0001017,3.47e-07,73;UBERON:0003080,4.21e-07,40;UBERON:0000073,5.31e-07,54;UBERON:0001016,7.92e-07,75|phase1_expression=59.2550734287738,16.7508195666893,13.1949779422965,20.2651021575576,17.5313505481222,33.0722165666423,29.6688053556318,41.7068334716291,39.1392647581634,46.3447762117547,47.5985951666904,51.5328147109873,41.7729781032142,38.0278750522639,45.9691471305615,39.6851524084059,40.5745889314325,36.4358800988765,48.6756239300373,39.4682376172168,45.2430303603691,44.0851823331931,39.1799683708403,19.5190755807956,25.9232487605902,17.2269589234506,16.3689558540448,22.1935369666466,14.8218267175972,23.4388020676736,25.9424697466706,27.3063189587641,42.4394703433353,0,36.1064524689093,32.748225135623,32.6670970019791,35.9937202433741,34.3787551590472,34.5525671022707,23.5292595212406,23.2235464885872,31.0726625939938,52.2471794598646,47.9512884668304,52.3108243660792,14.8654355426127,21.3664653252838,12.7417985985994,14.387812531497,16.6583841734181,7.18762821824858,42.9523471507805,34.0920206745332,31.9289109185341,26.2404624756666,28.3668105539369,21.1425557833751,66.1574827010885,59.2469896784677,55.7771635085438,16.6033820713875,14.2287167377782,10.3488467487361,9.88866362566974,14.209602298922,12.8828047522914,14.2160772968975,75.2786585359548,60.6176663109291,60.3632639078466,33.9924671440526,39.3146002893872,73.9844427258322,79.2642045320815,50.5570332635512,51.7544640697127,49.9257491913084,53.7622866396852,65.5474850019063,65.4136651757229,66.1559980607085,34.3395088771699,41.6444331423443,49.8122287752401,54.2116597271549,54.3859820652573,72.8821833176925,36.4242989932615,45.796365424712,31.8850937571846,22.371020801516,18.3592260101093,18.8896117073236,23.3919510281161,22.8493712419641,26.8248842451646,44.141453547717,24.4198844326697,28.2671659608272,47.0417022054113,32.0816193535795,30.5766287647975,0,20.3501578550541,26.6027858748854,21.7375511356357,26.1481084556647,103.057277691574,41.8606832162806,48.4024061677519,45.365356268509,41.7414050033466,42.0516167141817,51.0334988968959,28.274983049177,31.8881508377342,42.6568102913739,44.2305275974937,46.4270859349064,44.8308282474599,35.3958934788712,29.8226817948995,84.9064311333487,82.1031090708744,32.1875889562825,38.2210247173886,34.7943583976176,36.0879444887504,90.1739649217033,74.1150976566175,81.1727114649104,74.0491604019098,73.1346207964745,70.6479351502504,71.3861557498134,52.4472723829129,38.5661608891288,37.4029682481839,45.2449990155919,80.2843133079882,65.0622955546728,74.0055353499985,65.8580053942075,82.2561274739554,73.1529342826492,62.4053485567794,66.745469650666,81.2691333356815,104.95387449314,88.6793665786302,57.210086163597,79.2434660292954,49.4518076461476,52.8860090568415,67.0745479178322,42.1327912387941,28.8229655968481,31.2579849335152,61.9306059881151,54.4100459156143,49.6971289632401,53.7410549778427,48.4040010098613,44.7374627373397,43.9489155578271,40.5092836113425,39.3499203777361,42.6210011275914,36.9376794177964,38.6698221533732,30.5557973718945,34.0302678701129,28.9885864522403,72.760322203188,82.9411175777033,26.10308385572,32.7918702662795,72.0914286809091,79.1927051044095,71.2637061111176,57.681488042276,48.2560355143369,36.1428689613862,32.7425052465713,27.9988223030818,35.1869292320377,33.6236437749545,39.7726737723005,38.6492345721315,30.0431889325825,28.0789195288658,52.7276764649567,65.9213917758135,85.6578791115411,63.3355629598927,59.5434135604611,58.4932737885257,48.4391874371811,42.068892174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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:432508
|HGNC=
|MCL_coexpression_id=473
|TSSclassifier=NA
|UniProt=uniprot:Q6NVF9
|association_with_transcript=0bp_to_ENSMUST00000069168,NM_001013391,uc007hdd.2,uc007hdf.2,uc007hdg.2_5end
|cluster_id=chr10:116814011..116814034,-
|description=CAGE_peak_1_at_Cpsf6_5end
|id=chr10:116814011..116814034,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!9.42e-14!94;UBERON:0007811!5.66e-11!86;UBERON:0003056!5.88e-10!49;UBERON:0000033!8.84e-10!63;UBERON:0002346!6.04e-09!71;UBERON:0003075!6.04e-09!71;UBERON:0007284!6.04e-09!71;UBERON:0000468!7.79e-09!333;UBERON:0000955!1.22e-07!50;UBERON:0006238!1.22e-07!50;UBERON:0004121!2.41e-07!102;UBERON:0000924!2.41e-07!102;UBERON:0006601!2.41e-07!102;UBERON:0001049!2.53e-07!52;UBERON:0005068!2.53e-07!52;UBERON:0006241!2.53e-07!52;UBERON:0007135!2.53e-07!52;UBERON:0000922!2.76e-07!328;UBERON:0002616!3.34e-07!49;UBERON:0001017!3.47e-07!73;UBERON:0005743!3.47e-07!73;UBERON:0003080!4.21e-07!40;UBERON:0000073!7.92e-07!75;UBERON:0001016!7.92e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.96e-10,64;UBERON:0003075,1.96e-10,64;UBERON:0007284,1.96e-10,64;UBERON:0010371,4.27e-10,73;UBERON:0003056,5.88e-10,49;UBERON:0004121,2.83e-08,95;UBERON:0000924,2.83e-08,95;UBERON:0006601,2.83e-08,95;UBERON:0000955,1.08e-07,47;UBERON:0006238,1.08e-07,47;UBERON:0001049,2.53e-07,52;UBERON:0005068,2.53e-07,52;UBERON:0006241,2.53e-07,52;UBERON:0007135,2.53e-07,52;UBERON:0000922,2.81e-07,320;UBERON:0002616,3.01e-07,46;UBERON:0001017,3.47e-07,73;UBERON:0003080,4.21e-07,40;UBERON:0000073,5.31e-07,54;UBERON:0001016,7.92e-07,75
|phase1_expression=59.2550734287738,16.7508195666893,13.1949779422965,20.2651021575576,17.5313505481222,33.0722165666423,29.6688053556318,41.7068334716291,39.1392647581634,46.3447762117547,47.5985951666904,51.5328147109873,41.7729781032142,38.0278750522639,45.9691471305615,39.6851524084059,40.5745889314325,36.4358800988765,48.6756239300373,39.4682376172168,45.2430303603691,44.0851823331931,39.1799683708403,19.5190755807956,25.9232487605902,17.2269589234506,16.3689558540448,22.1935369666466,14.8218267175972,23.4388020676736,25.9424697466706,27.3063189587641,42.4394703433353,0,36.1064524689093,32.748225135623,32.6670970019791,35.9937202433741,34.3787551590472,34.5525671022707,23.5292595212406,23.2235464885872,31.0726625939938,52.2471794598646,47.9512884668304,52.3108243660792,14.8654355426127,21.3664653252838,12.7417985985994,14.387812531497,16.6583841734181,7.18762821824858,42.9523471507805,34.0920206745332,31.9289109185341,26.2404624756666,28.3668105539369,21.1425557833751,66.1574827010885,59.2469896784677,55.7771635085438,16.6033820713875,14.2287167377782,10.3488467487361,9.88866362566974,14.209602298922,12.8828047522914,14.2160772968975,75.2786585359548,60.6176663109291,60.3632639078466,33.9924671440526,39.3146002893872,73.9844427258322,79.2642045320815,50.5570332635512,51.7544640697127,49.9257491913084,53.7622866396852,65.5474850019063,65.4136651757229,66.1559980607085,34.3395088771699,41.6444331423443,49.8122287752401,54.2116597271549,54.3859820652573,72.8821833176925,36.4242989932615,45.796365424712,31.8850937571846,22.371020801516,18.3592260101093,18.8896117073236,23.3919510281161,22.8493712419641,26.8248842451646,44.141453547717,24.4198844326697,28.2671659608272,47.0417022054113,32.0816193535795,30.5766287647975,0,20.3501578550541,26.6027858748854,21.7375511356357,26.1481084556647,103.057277691574,41.8606832162806,48.4024061677519,45.365356268509,41.7414050033466,42.0516167141817,51.0334988968959,28.274983049177,31.8881508377342,42.6568102913739,44.2305275974937,46.4270859349064,44.8308282474599,35.3958934788712,29.8226817948995,84.9064311333487,82.1031090708744,32.1875889562825,38.2210247173886,34.7943583976176,36.0879444887504,90.1739649217033,74.1150976566175,81.1727114649104,74.0491604019098,73.1346207964745,70.6479351502504,71.3861557498134,52.4472723829129,38.5661608891288,37.4029682481839,45.2449990155919,80.2843133079882,65.0622955546728,74.0055353499985,65.8580053942075,82.2561274739554,73.1529342826492,62.4053485567794,66.745469650666,81.2691333356815,104.95387449314,88.6793665786302,57.210086163597,79.2434660292954,49.4518076461476,52.8860090568415,67.0745479178322,42.1327912387941,28.8229655968481,31.2579849335152,61.9306059881151,54.4100459156143,49.6971289632401,53.7410549778427,48.4040010098613,44.7374627373397,43.9489155578271,40.5092836113425,39.3499203777361,42.6210011275914,36.9376794177964,38.6698221533732,30.5557973718945,34.0302678701129,28.9885864522403,72.760322203188,82.9411175777033,26.10308385572,32.7918702662795,72.0914286809091,79.1927051044095,71.2637061111176,57.681488042276,48.2560355143369,36.1428689613862,32.7425052465713,27.9988223030818,35.1869292320377,33.6236437749545,39.7726737723005,38.6492345721315,30.0431889325825,28.0789195288658,52.7276764649567,65.9213917758135,85.6578791115411,63.3355629598927,59.5434135604611,58.4932737885257,48.4391874371811,42.0688921741866,28.887765922813,29.1217306855449,28.4594522003663,65.570126546425,62.3092014508854,54.1917690847498,55.5836732604498,51.8530893467696,44.0502723581856,37.1128017311546,41.9930237347342,31.5745625166294,67.5710570678566,35.3533900285078,30.5796919652269,30.5620442316005,28.1653939229402,29.4290548031654,43.6017528793187,74.0911420022595,87.1862623964838,74.1786024837572,70.6417647348391,67.1700092341681,41.1815498732804,40.78293240228,56.7486518782288,54.7017783432474,53.7362570375732,44.8985482321122,38.1633809923629,37.030158996867,15.0791283939272,21.2123216689297,33.4399705652945,37.8033342437484,68.715652514775,59.8951718486158,41.8034110710522,32.8212205365685,53.3208890813474,47.2430880598933,73.2439552291516,62.6098250635686,58.818849957752,58.3137653424995,55.8638768311354,57.8666598664398,55.7355766904598,79.0450438397645,61.0342366395555,42.3796136728067,63.0372532698339,58.3994235322776,27.8764790513922,47.8277853225313,45.6508571016774,45.0766140616596,31.5973025382427,35.6624771614956,41.0900986137472,39.9887102425256,48.4836434603221,37.2923374364263,33.7339547439996,38.1601510018291,58.5556121896515,69.5035822960857,40.7479853915677,52.7269106177717,72.0001348587631,53.5106452806212,57.4276081901402,22.5304062344803,37.0781298740662,37.4942765428962,37.7103560673985,53.0933734471566,61.3564821444441,58.5638501052393,46.5552141612232,58.1058785097517,33.5202962124328,66.567683421773,48.698201027388,49.3264614432102,61.8549721414837,53.8733787033416,60.8289313358562,53.3053143571198,33.9956859987711,34.1481543669725,33.8589935820838,27.6854479224383,83.6708703022103,64.6555905463379,54.866713137475,50.8084559315159,41.7072496755199,44.370369960606,39.9216191153373,34.5517843418919,32.6629732695318,41.0083946637371,60.3151444392084,76.7019881205611,49.4720886466722,63.5855385885036,47.9182945102382,56.0934336629384,65.2506246870392,55.3368635586788,72.5626663425919,64.7445443813696,63.9426613892461,71.4185132619683,43.7886465026755,51.8690333682378,63.1415199672084,73.4009452236674,65.3661657230361,63.7035882455835,67.4941139187818,65.7291589162441,73.4633616154198,67.3518916714095,67.5383113526484,70.1384325558002,65.5679421238602,34.2362879258969,47.948965928798,44.6775005915189,51.0369233746799,37.2855916482128,30.7799259739938,45.2384511940145,45.446096364762,32.6021867622986,70.5939803271333,59.842280745933,57.2895513439397,48.6344506032636,67.8231694572936,58.9207239963966,66.152205022717,70.2501077029784,65.2525068937255,66.2733199042329,79.916257639816,80.6030244270083,79.5618602814265,69.2854143644638,64.7704672520465,56.2561135857043,62.0068370566506,63.8708677440572,67.3930340142812,64.4377889997684,62.6093870728892,64.5102087540381,53.7502252877125,61.208045699055,56.286759576501,58.5841240278181,56.0880137573101,56.7153108163293,54.8074248068398,63.737132418194,52.4589956149686,55.5499273278726,64.8546436656713,55.8130239868142,59.3830190420736,60.414830034657,58.3540233464145,61.2952427650174,56.3587072460326,72.948495315506,64.3001798233024,55.2610146126911,46.6523389213446,55.4673891445758,50.1557188550968,49.7123050096512,50.2952958157628,47.9162450527705,48.7785246775551,48.3095207871739,46.1416992884639
|short_description=p1@Cpsf6
}}

Revision as of 22:31, 3 August 2015

Short description:p1@Cpsf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cpsf6_5end
Coexpression cluster:MCL_coexpression_mm9:473
Association with transcript: 0bp_to_ENSMUST00000069168, NM_001013391, uc007hdd.2, uc007hdf.2, uc007hdg.2_5end
EntrezGene:432508
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cpsf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G759.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.75
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.27
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I733.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E941.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E739.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F246.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E647.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F151.53
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E441.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A145.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A339.69
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A540.57
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A236.44
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A448.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A639.47
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H244.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I939.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.92
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I222.19
Ileum epithelium, pool1.CNhs13199.10252-104B914.82
Ileum epithelium, pool2.CNhs13232.10253-104C123.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G642.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F632.75
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H134.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G923.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H431.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D852.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D947.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B352.31
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.09
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.93
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C126.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.14
Mouse Granule cells, donor1.CNhs12131.11713-123C366.16
Mouse Granule cells, donor2.CNhs12357.11731-123E359.25
Mouse Granule cells, donor3.CNhs12108.11636-122C755.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D575.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F560.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D960.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D273.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F279.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D650.56
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D351.75
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F349.93
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D753.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D465.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F465.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D866.16
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.34
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I649.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D654.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E172.88
Mouse Schwann, donor1.CNhs12507.11728-123D936.42
Mouse Schwann, donor2.CNhs12573.11746-123F945.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I744.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I828.27
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G647.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.15
accessory axillary lymph node, adult.CNhs10475.1063-29H9103.06
adrenal gland, adult.CNhs10508.49-24D741.86
adrenal gland, embryo E14.CNhs11038.406-44C548.40
adrenal gland, embryo E16.CNhs11004.1254-43D645.37
adrenal gland, embryo E17.CNhs11043.1263-45I141.74
adrenal gland, embryo E18.CNhs11026.1262-18F542.05
adrenal gland, neonate N00.CNhs11191.1311-23C151.03
adrenal gland, neonate N25.CNhs11223.1377-27I328.27
amnion, adult pregnant day17.5.CNhs10488.583-22A831.89
aorta, adult.CNhs10498.46-23H142.66
bone (os femoris), adult.CNhs10483.56-12G244.23
bone (os femoris), neonate N02.CNhs11227.1985-43F546.43
bone (os femoris), neonate N16.CNhs11225.1525-43A644.83
bone (os femoris), neonate N20.CNhs11195.1350-25C335.40
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B284.91
cerebellum, neonate N30.CNhs11135.1395-42I282.10
colon, adult.CNhs10468.36-18H732.19
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D134.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.09
corpora quadrigemina, adult.CNhs10501.16-22A490.17
corpus striatum, adult.CNhs10487.19-21D874.12
corpus striatum, neonate N00.CNhs11226.630-43F181.17
cortex, adult.CNhs10473.12-14D574.05
cortex, neonate N30.CNhs11107.1392-42F273.13
diencephalon, adult.CNhs10482.20-12F270.65
diencephalon, neonate N30.CNhs11201.1388-42B271.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B152.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A238.57
epididymis, adult.CNhs10490.58-23B237.40
eyeball, adult.CNhs10484.31-12G445.24
eyeball, embryo E12.CNhs11016.345-16C680.28
eyeball, embryo E14.CNhs10521.399-16E265.06
eyeball, embryo E15.CNhs10593.426-16C974.01
eyeball, embryo E17.CNhs11023.1261-18D465.86
eyeball, neonate N00.CNhs11207.633-15C682.26
eyeball, neonate N01.CNhs11140.1532-43E773.15
eyeball, neonate N02.CNhs11205.1551-44G862.41
eyeball, neonate N16.CNhs11188.777-19A266.75
forelimb, embryo E11.CNhs10596.335-25E281.27
forelimb, embryo E12.CNhs10600.359-14H2104.95
forelimb, embryo E13.CNhs10589.384-1E288.68
forelimb, embryo E14.CNhs10577.413-26A857.21
forelimb, embryo E15.CNhs11007.437-20E779.24
forelimb, embryo E17.CNhs10598.1517-43C449.45
forelimb, embryo E18.CNhs11008.1520-43B552.89
gonad, embryo E13.CNhs11044.1564-45I667.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C842.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.26
heart, embryo E11.CNhs10586.331-24E961.93
heart, embryo E12.CNhs11015.353-12F554.41
heart, embryo E13.CNhs11013.376-3I949.70
heart, embryo E14.CNhs10597.403-26D453.74
heart, embryo E15.CNhs11017.431-16C848.40
heart, embryo E16.CNhs11021.457-17C644.74
heart, embryo E17.CNhs11025.479-18E543.95
heart, embryo E18.CNhs11030.1283-20G340.51
heart, neonate N00.CNhs11213.639-21E339.35
heart, neonate N03.CNhs11221.1349-25I242.62
heart, neonate N10.CNhs11118.749-24G136.94
heart, neonate N16.CNhs11209.782-15G138.67
heart, neonate N20.CNhs11127.821-26I630.56
heart, neonate N25.CNhs11196.1351-25D334.03
heart, neonate N30.CNhs11202.1390-42D228.99
hippocampus, adult.CNhs10478.13-16E872.76
hippocampus, neonate N00.CNhs11228.627-43G182.94
intestinal mucosa, adult.CNhs10506.860-29I326.10
intestine, adult.CNhs10496.178-9A332.79
intestine, embryo E12.CNhs11019.1251-16I572.09
intestine, embryo E13.CNhs11010.381-16D579.19
intestine, embryo E15.CNhs10602.976-16D871.26
intestine, embryo E16.CNhs10585.463-22H457.68
intestine, embryo E17.CNhs10582.482-18D348.26
intestine, embryo E18.CNhs10526.1289-20F736.14
intestine, neonate N00.CNhs11126.644-26D132.74
intestine, neonate N01.CNhs11192.1322-23E928.00
intestine, neonate N06.CNhs11102.688-20B835.19
intestine, neonate N07.CNhs11095.720-20F233.62
intestine, neonate N10.CNhs11098.755-23A539.77
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G128.08
kidney, embryo E14.CNhs10606.411-4I952.73
kidney, embryo E15.CNhs10997.434-16F865.92
kidney, embryo E16.CNhs10584.464-22A585.66
kidney, embryo E17.CNhs11028.483-18I263.34
kidney, embryo E18.CNhs11001.1288-20C759.54
kidney, neonate N00.CNhs11214.646-21G758.49
kidney, neonate N10.CNhs11206.758-6D548.44
kidney, neonate N20.CNhs11113.832-19I142.07
kidney, neonate N25.CNhs11122.1353-25F328.89
kidney, neonate N30.CNhs11203.1385-42H129.12
liver, adult pregnant day01.CNhs10466.508-5B228.46
liver, embryo E12.CNhs10601.355-15F865.57
liver, embryo E13.CNhs10524.378-3H662.31
liver, embryo E14.CNhs10594.409-16E154.19
liver, embryo E15.CNhs10520.433-16D755.58
liver, embryo E16.CNhs10523.462-17F551.85
liver, embryo E17.CNhs10510.481-18A344.05
liver, embryo E18.CNhs10579.499-43G437.11
liver, neonate N00.CNhs11117.641-24F441.99
liver, neonate N03.CNhs11123.1345-25G231.57
liver, neonate N06.CNhs11101.684-20A867.57
liver, neonate N07.CNhs11103.716-20H235.35
liver, neonate N10.CNhs11115.751-24B930.58
liver, neonate N20.CNhs11220.823-25A330.56
liver, neonate N25.CNhs11198.1368-26H128.17
liver, neonate N30.CNhs11106.1382-42D129.43
lung, adult.CNhs10474.28-22B143.60
lung, embryo E12.CNhs10522.354-16G274.09
lung, embryo E14.CNhs10604.404-26F887.19
lung, embryo E15.CNhs11020.432-17C574.18
lung, embryo E16.CNhs10998.458-17B670.64
lung, embryo E17.CNhs10605.480-44A667.17
lung, embryo E18.CNhs10583.1287-20I641.18
lung, neonate N00.CNhs11224.640-42C640.78
lung, neonate N06.CNhs11212.683-20E556.75
lung, neonate N07.CNhs11111.715-19A354.70
lung, neonate N10.CNhs11219.750-23E653.74
lung, neonate N20.CNhs11109.822-18A444.90
lung, neonate N25.CNhs11119.1359-25C738.16
lung, neonate N30.CNhs11133.1394-42H237.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B633.44
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C268.72
medulla oblongata, neonate N30.CNhs11200.1396-42A359.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C741.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E153.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E247.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E373.24
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D762.61
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D858.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D958.31
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D455.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D557.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D655.74
olfactory brain, adult.CNhs10489.18-22I979.05
ovary, adult.CNhs10507.91-2I761.03
ovary, embryo E18.CNhs11040.505-44H742.38
ovary, neonate N00.CNhs11217.1299-22I463.04
oviduct, adult pregnant day01.CNhs10500.988-6G658.40
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F447.83
pancreas, embryo E15.CNhs11042.1556-45F245.65
pancreas, embryo E16.CNhs11003.460-26E545.08
pancreas, embryo E17.CNhs10599.1558-45G331.60
pancreas, embryo E18.CNhs10580.1535-43I735.66
pancreas, neonate N00.CNhs11105.645-26G941.09
pancreas, neonate N01.CNhs11138.1531-43D739.99
pancreas, neonate N02.CNhs11139.1539-43D848.48
pancreas, neonate N16.CNhs11136.787-43B637.29
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G858.56
pituitary gland, embryo E12.CNhs11018.346-16E669.50
pituitary gland, embryo E13.CNhs11009.370-44C740.75
pituitary gland, embryo E14.CNhs11037.398-44A552.73
pituitary gland, embryo E15.CNhs10592.427-16B972.00
pituitary gland, embryo E16.CNhs11036.449-43F653.51
pituitary gland, embryo E17.CNhs11039.1265-44F557.43
pituitary gland, neonate N00.CNhs11190.1308-22E922.53
placenta, adult pregnant day10.CNhs10472.539-13I737.08
placenta, adult pregnant day17.CNhs10464.577-18G337.49
prostate, adult.CNhs10470.859-1F837.71
skin, adult.CNhs10492.30-1C353.09
skin, neonate N00.CNhs11124.650-25G461.36
skin, neonate N03.CNhs11215.662-22H358.56
skin, neonate N06.CNhs11097.693-20I546.56
skin, neonate N10.CNhs11108.762-6C458.11
small intestine, neonate N16.CNhs11114.790-21I133.52
spinal cord, adult.CNhs10505.24-13C966.57
spleen, adult.CNhs10465.25-2G248.70
spleen, embryo E16.CNhs11035.461-43C149.33
spleen, embryo E18.CNhs11011.1271-21F261.85
spleen, neonate N10.CNhs11116.752-24D153.87
spleen, neonate N20.CNhs11112.824-19H160.83
spleen, neonate N25.CNhs11099.1354-25G353.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C634.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C934.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D333.86
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E383.67
stomach, embryo E15.CNhs10603.1252-16G864.66
stomach, embryo E16.CNhs11022.459-17D454.87
stomach, embryo E17.CNhs11006.1035-18D550.81
stomach, embryo E18.CNhs10999.1286-20C641.71
stomach, neonate N03.CNhs11193.1340-24B844.37
stomach, neonate N07.CNhs11210.718-18A939.92
stomach, neonate N25.CNhs11104.1355-25E434.55
stomach, neonate N30.CNhs11134.1386-42I132.66
submandibular gland, adult.CNhs10469.59-29C141.01
testis, adult.CNhs10504.57-7G560.32
testis, embryo E13.CNhs11031.389-23F576.70
testis, embryo E15.CNhs11034.443-27C549.47
testis, embryo E16.CNhs11033.470-26G563.59
testis, embryo E17.CNhs11029.486-18I547.92
testis, embryo E18.CNhs11027.503-18G556.09
testis, neonate N00.CNhs11189.1300-22B765.25
testis, neonate N07.CNhs11222.726-26I455.34
testis, neonate N10.CNhs11204.763-44D972.56
testis, neonate N20.CNhs11110.839-18H364.74
testis, neonate N30.CNhs11130.1391-42E263.94
thymus, adult.CNhs10471.38-12B571.42
thymus, embryo E14.CNhs11041.402-44I443.79
thymus, embryo E15.CNhs11005.430-45I251.87
thymus, embryo E16.CNhs11002.456-26C563.14
thymus, embryo E17.CNhs10581.478-18C173.40
thymus, embryo E18.CNhs10595.1273-19G465.37
thymus, neonate N02.CNhs11181.1541-43F863.70
thymus, neonate N03.CNhs11137.2104-43C767.49
thymus, neonate N06.CNhs11197.681-26C465.73
thymus, neonate N07.CNhs11211.713-19D373.46
thymus, neonate N10.CNhs11194.748-24E467.35
thymus, neonate N20.CNhs11186.820-7A267.54
thymus, neonate N25.CNhs11125.1362-25G770.14
thymus, neonate N30.CNhs11132.1393-42G265.57
tongue, adult.CNhs10499.32-1B434.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H347.95
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F744.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G551.04
urinary bladder, adult.CNhs10481.879-12E437.29
uterus, adult pregnant day19.CNhs10497.590-15F530.78
uterus, adult.CNhs10509.92-27E545.24
vagina, adult.CNhs10502.89-27D545.45
vesicular gland, adult.CNhs10491.51-27F832.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A170.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A259.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A357.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D748.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A467.82
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A558.92
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A770.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A865.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A966.27
whole body, embryo E11.CNhs11014.324-5I879.92
whole body, embryo E12.CNhs10587.857-27C980.60
whole body, embryo E13.CNhs10512.372-23H279.56
whole body, embryo E14.5.CNhs10578.420-27D269.29
whole body, embryo E14.CNhs10519.395-14B164.77
whole body, embryo E16.CNhs10514.453-14F256.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G562.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G563.87
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G567.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G564.44
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G562.61
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G564.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G553.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G561.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G558.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G556.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G556.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G554.81
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G563.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G552.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G555.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G564.85
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G555.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G559.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G560.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G558.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G561.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G556.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G572.95
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G564.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G555.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G546.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G555.47
whole body, embryo E17.5.CNhs10513.490-9F950.16
whole body, embryo E17.CNhs10517.475-3I549.71
whole body, embryo E18.CNhs10516.493-3B350.30
whole body, neonate N00.CNhs10525.657-19C247.92
whole body, neonate N01.CNhs10576.659-23C648.78
whole body, neonate N06.CNhs10515.692-21D148.31
whole body, neonate N10.CNhs10518.761-6B446.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.96e-1064
neural plate1.96e-1064
presumptive neural plate1.96e-1064
ecto-epithelium4.27e-1073
pre-chordal neural plate5.88e-1049
ectoderm-derived structure2.83e-0895
ectoderm2.83e-0895
presumptive ectoderm2.83e-0895
brain1.08e-0747
future brain1.08e-0747
neural tube2.53e-0752
neural rod2.53e-0752
future spinal cord2.53e-0752
neural keel2.53e-0752
embryo2.81e-07320
regional part of brain3.01e-0746
central nervous system3.47e-0773
anterior neural tube4.21e-0740
regional part of nervous system5.31e-0754
nervous system7.92e-0775
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