FFCP PHASE1:Mm9::chr19:36422807..36422843,+: Difference between revisions
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{{FFCP|EntrezGene=76073|HGNC=|MCL_coexpression_id=374|UniProt=Q3UK78|association_with_transcript=-100bp_to_uc008hhi.1,uc012bkz.1_5end|description=CAGE_peak_2_at_Pcgf5_5end|id=chr19:36422807..36422843,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,8.30e-07,25;CL:0000223,8.79e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!5.97e-10!55;UBERON:0006562!9.96e-10!24;UBERON:0001557!9.96e-10!24;UBERON:0001042!9.96e-10!24;UBERON:0008814!9.96e-10!24;UBERON:0009145!9.96e-10!24;UBERON:0000483!1.18e-09!181;UBERON:0000490!1.71e-09!66;UBERON:0000119!2.88e-09!183;UBERON:0002370!3.36e-09!23;UBERON:0000974!3.36e-09!23;UBERON:0004807!3.36e-09!23;UBERON:0005058!3.36e-09!23;UBERON:0003351!3.36e-09!23;UBERON:0009113!3.36e-09!23;UBERON:0003295!3.36e-09!23;UBERON:0009722!3.36e-09!23;UBERON:0005562!3.36e-09!23;UBERON:0007690!3.36e-09!23;UBERON:0003408!4.24e-09!24;UBERON:0005911!4.16e-08!69;UBERON:0000072!6.11e-08!27;UBERON:0000063!1.56e-07!35;UBERON:0004535!3.00e-07!23;UBERON:0001009!3.00e-07!23;UBERON:0000064!8.88e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.45e-10,174;UBERON:0000119,3.34e-10,176;UBERON:0007811,5.33e-10,36;UBERON:0006562,6.19e-10,24;UBERON:0001557,6.19e-10,24;UBERON:0001042,6.19e-10,24;UBERON:0008814,6.19e-10,24;UBERON:0009145,6.19e-10,24;UBERON:0003929,1.08e-09,55;UBERON:0002370,2.15e-09,23;UBERON:0000974,2.15e-09,23;UBERON:0004807,2.15e-09,23;UBERON:0005058,2.15e-09,23;UBERON:0003351,2.15e-09,23;UBERON:0009113,2.15e-09,23;UBERON:0003295,2.15e-09,23;UBERON:0009722,2.15e-09,23;UBERON:0005562,2.15e-09,23;UBERON:0007690,2.15e-09,23;UBERON:0003408,2.73e-09,24;UBERON:0000490,3.75e-09,66;UBERON:0000072,3.91e-08,27;UBERON:0005911,1.19e-07,69;UBERON:0004535,2.15e-07,23;UBERON:0001009,2.15e-07,23|phase1_expression=0.640595388419176,8.72438519098403,10.0099832665698,6.95667686005709,7.01254021924886,4.19698179779725,5.60670337429262,5.16493293766305,13.2341398822567,15.2141942109296,8.21846247482424,8.45584885350566,5.30722262786738,4.45844052336887,0,0.202475267389826,0.699561878128147,1.10411757875383,1.09691546884591,0.84877930359606,2.89147186513637,3.07801948722744,1.56719873483361,2.87986361028132,3.21172993494038,7.46501553349526,3.87685796543167,5.38678081714723,3.99049180858385,3.52842181663903,3.76941868114018,0,0,0,5.48818077527422,3.82339684324532,4.08338712524738,2.51118978442145,0.7813353445238,0.523523743973798,1.76469446409304,2.73218193983378,1.45653105909346,9.81995180209503,9.93493925951243,6.24058957349717,2.34717403304412,4.57852828398938,1.31811709640683,1.74986909166855,0.839918529752175,2.87505128729943,1.17447824240415,15.9579671242496,9.07453257684653,1.80081605225163,1.71920063963254,2.57836046138721,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,1.4209602298922,1.19840044207362,1.92109152660777,2.69592992002042,1.62007125998029,2.10324961351382,0.571301968807607,0.441737081903227,1.22490799214954,0.766763768145891,2.75765635983006,3.30347642998166,2.29837208553338,3.99376986466233,1.18697658957174,1.00636407962651,1.56274011167028,2.79182999001381,1.68828783009504,1.83357897332172,0.589257170947335,0.996601765593721,0.186399445825301,1.06016670666458,0.604572480854284,4.63783181922684,1.72084775396277,17.6792546764015,5.93673510801599,6.49776417447669,7.16843019355737,4.21333260395256,6.13549161281008,7.79358013808606,5.65343319216544,1.97180787687353,7.69958864485907,30.5766287647975,35.5533351576666,1.29894624606728,0.506719730950197,1.51657333504435,5.82337786567206,3.6251303710604,2.67195850316685,0.693941307064543,1.21786191324856,0.461230994512117,0.150722640552623,2.82212897125692,0.753999547978053,16.3148678704687,5.06097749219691,3.5384422077995,1.61766849947409,3.3126227769059,2.42437626567611,0,2.63502717310392,2.09446706813455,5.36459815938042,18.8109745474295,14.3976655438418,10.9280395282836,3.14560342750128,1.83000241127451,1.88481528169297,3.47648640384553,2.04572365864264,3.53239675751252,2.27137768294861,0.712875546952214,1.99051152976149,1.76905930903572,2.94618598241064,1.56144531555244,2.5289231487682,2.88099407688559,4.52114453507145,6.80364991513279,5.76511741281824,5.43470002446427,2.84573707812917,0.215567992932842,0.378212160335639,0.175951124163949,0.876782929710299,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,3.51106593656617,6.94839349209731,8.52490498186778,1.44988040774851,1.64168241986767,2.52086886045421,4.02466050494857,3.54175617145327,5.24508183817086,7.90615412151387,8.85302224618743,10.1585847859437,9.05079174524142,6.895033491322,8.67436262140656,8.47959927066927,8.78200461164202,11.6759584321523,1.47202963994889,1.3377599609307,10.2429822724977,3.43785736662608,0,0.232236671860439,1.15980715189884,1.21010114774006,1.11189021922435,1.14135375667535,2.84717436926707,1.31759163779209,2.76468729680296,2.18852119245266,0.974820435595601,2.69645822596266,2.16138049874694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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76073 | |||
|HGNC= | |||
|MCL_coexpression_id=374 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UK78 | |||
|association_with_transcript=-100bp_to_uc008hhi.1,uc012bkz.1_5end | |||
|cluster_id=chr19:36422807..36422843,+ | |||
|description=CAGE_peak_2_at_Pcgf5_5end | |||
|id=chr19:36422807..36422843,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.30e-07,25;CL:0000223,8.79e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!5.97e-10!55;UBERON:0006562!9.96e-10!24;UBERON:0001557!9.96e-10!24;UBERON:0001042!9.96e-10!24;UBERON:0008814!9.96e-10!24;UBERON:0009145!9.96e-10!24;UBERON:0000483!1.18e-09!181;UBERON:0000490!1.71e-09!66;UBERON:0000119!2.88e-09!183;UBERON:0002370!3.36e-09!23;UBERON:0000974!3.36e-09!23;UBERON:0004807!3.36e-09!23;UBERON:0005058!3.36e-09!23;UBERON:0003351!3.36e-09!23;UBERON:0009113!3.36e-09!23;UBERON:0003295!3.36e-09!23;UBERON:0009722!3.36e-09!23;UBERON:0005562!3.36e-09!23;UBERON:0007690!3.36e-09!23;UBERON:0003408!4.24e-09!24;UBERON:0005911!4.16e-08!69;UBERON:0000072!6.11e-08!27;UBERON:0000063!1.56e-07!35;UBERON:0004535!3.00e-07!23;UBERON:0001009!3.00e-07!23;UBERON:0000064!8.88e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.45e-10,174;UBERON:0000119,3.34e-10,176;UBERON:0007811,5.33e-10,36;UBERON:0006562,6.19e-10,24;UBERON:0001557,6.19e-10,24;UBERON:0001042,6.19e-10,24;UBERON:0008814,6.19e-10,24;UBERON:0009145,6.19e-10,24;UBERON:0003929,1.08e-09,55;UBERON:0002370,2.15e-09,23;UBERON:0000974,2.15e-09,23;UBERON:0004807,2.15e-09,23;UBERON:0005058,2.15e-09,23;UBERON:0003351,2.15e-09,23;UBERON:0009113,2.15e-09,23;UBERON:0003295,2.15e-09,23;UBERON:0009722,2.15e-09,23;UBERON:0005562,2.15e-09,23;UBERON:0007690,2.15e-09,23;UBERON:0003408,2.73e-09,24;UBERON:0000490,3.75e-09,66;UBERON:0000072,3.91e-08,27;UBERON:0005911,1.19e-07,69;UBERON:0004535,2.15e-07,23;UBERON:0001009,2.15e-07,23 | |||
|phase1_expression=0.640595388419176,8.72438519098403,10.0099832665698,6.95667686005709,7.01254021924886,4.19698179779725,5.60670337429262,5.16493293766305,13.2341398822567,15.2141942109296,8.21846247482424,8.45584885350566,5.30722262786738,4.45844052336887,0,0.202475267389826,0.699561878128147,1.10411757875383,1.09691546884591,0.84877930359606,2.89147186513637,3.07801948722744,1.56719873483361,2.87986361028132,3.21172993494038,7.46501553349526,3.87685796543167,5.38678081714723,3.99049180858385,3.52842181663903,3.76941868114018,0,0,0,5.48818077527422,3.82339684324532,4.08338712524738,2.51118978442145,0.7813353445238,0.523523743973798,1.76469446409304,2.73218193983378,1.45653105909346,9.81995180209503,9.93493925951243,6.24058957349717,2.34717403304412,4.57852828398938,1.31811709640683,1.74986909166855,0.839918529752175,2.87505128729943,1.17447824240415,15.9579671242496,9.07453257684653,1.80081605225163,1.71920063963254,2.57836046138721,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,1.4209602298922,1.19840044207362,1.92109152660777,2.69592992002042,1.62007125998029,2.10324961351382,0.571301968807607,0.441737081903227,1.22490799214954,0.766763768145891,2.75765635983006,3.30347642998166,2.29837208553338,3.99376986466233,1.18697658957174,1.00636407962651,1.56274011167028,2.79182999001381,1.68828783009504,1.83357897332172,0.589257170947335,0.996601765593721,0.186399445825301,1.06016670666458,0.604572480854284,4.63783181922684,1.72084775396277,17.6792546764015,5.93673510801599,6.49776417447669,7.16843019355737,4.21333260395256,6.13549161281008,7.79358013808606,5.65343319216544,1.97180787687353,7.69958864485907,30.5766287647975,35.5533351576666,1.29894624606728,0.506719730950197,1.51657333504435,5.82337786567206,3.6251303710604,2.67195850316685,0.693941307064543,1.21786191324856,0.461230994512117,0.150722640552623,2.82212897125692,0.753999547978053,16.3148678704687,5.06097749219691,3.5384422077995,1.61766849947409,3.3126227769059,2.42437626567611,0,2.63502717310392,2.09446706813455,5.36459815938042,18.8109745474295,14.3976655438418,10.9280395282836,3.14560342750128,1.83000241127451,1.88481528169297,3.47648640384553,2.04572365864264,3.53239675751252,2.27137768294861,0.712875546952214,1.99051152976149,1.76905930903572,2.94618598241064,1.56144531555244,2.5289231487682,2.88099407688559,4.52114453507145,6.80364991513279,5.76511741281824,5.43470002446427,2.84573707812917,0.215567992932842,0.378212160335639,0.175951124163949,0.876782929710299,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,3.51106593656617,6.94839349209731,8.52490498186778,1.44988040774851,1.64168241986767,2.52086886045421,4.02466050494857,3.54175617145327,5.24508183817086,7.90615412151387,8.85302224618743,10.1585847859437,9.05079174524142,6.895033491322,8.67436262140656,8.47959927066927,8.78200461164202,11.6759584321523,1.47202963994889,1.3377599609307,10.2429822724977,3.43785736662608,0,0.232236671860439,1.15980715189884,1.21010114774006,1.11189021922435,1.14135375667535,2.84717436926707,1.31759163779209,2.76468729680296,2.18852119245266,0.974820435595601,2.69645822596266,2.16138049874694,3.98282546508734,0,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,1.05203729835478,1.07502113111237,2.50937251565324,2.35498091762062,4.07210640941942,7.11486305009157,0.667380422864376,0.393117990226406,0.674586337154561,0.811440485554012,0.72353147925725,0.763877555344259,0.863088412352432,2.10775794807546,1.37280706594041,4.31304619582064,2.23284568601102,1.5601883655728,5.30415643688935,3.76734568396016,5.30687873499704,4.43407656399851,0.37898282354097,1.30371981153621,0.848725428875941,0.704070744865506,2.01007508930179,0.952174563544055,3.12213836572478,1.89162172927429,1.7717175171902,1.2756381492599,2.45794972073607,2.59027472798843,4.19482269886384,0,0.54390568381871,1.47529281905711,1.37968373152366,1.76605648986571,4.10240903072711,7.54100748732707,6.81671503451807,3.47059041357882,3.90438744296638,6.46270193198397,2.38968797952552,2.67358408898873,6.51076020814315,6.8817819284732,2.33804686329049,2.37172666767914,2.57057053137446,1.13552068166615,0.534196811001766,0.325773918707152,2.3095817216155,1.32745138339963,0.242780636154981,0.604647113929502,1.13163047853539,0.590603785761546,1.22974059177571,1.80899805217755,0,0.712994756769443,2.21225730555071,2.10837217149998,1.03135543248187,5.10659408630682,0.900305470156551,0,1.50035924522115,0.532020700926821,0.535106452806212,1.31639216481697,3.34911444026059,2.81606049676452,6.14313005505079,1.10264199027481,4.78170133530292,1.77610869365496,0.663442174209714,1.67121281604391,0.328281799490123,3.78925087618806,2.59595422814714,0.683483523191411,0,0.740778109478847,1.31857919903284,0.820165366326151,0.457556346413045,24.9868292090967,26.8706788461423,31.2331940797998,0.954670618015114,0,0.406638934253697,1.40406943068342,1.25452977608681,1.9652630737156,1.75323650300267,2.47960367176008,2.6175594198403,4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| |||
|short_description=p2@Pcgf5 | |||
}} |
Revision as of 23:39, 3 August 2015
Short description: | p2@Pcgf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcgf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | -100bp_to_uc008hhi.1, uc012bkz.1_5end |
EntrezGene: | 76073 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.30e-07 | 25 |
endodermal cell | 8.79e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium | 1.45e-10 | 174 |
cell layer | 3.34e-10 | 176 |
craniocervical region | 5.33e-10 | 36 |
pharynx | 6.19e-10 | 24 |
upper respiratory tract | 6.19e-10 | 24 |
chordate pharynx | 6.19e-10 | 24 |
pharyngeal arch system | 6.19e-10 | 24 |
pharyngeal region of foregut | 6.19e-10 | 24 |
gut epithelium | 1.08e-09 | 55 |
thymus | 2.15e-09 | 23 |
neck | 2.15e-09 | 23 |
respiratory system epithelium | 2.15e-09 | 23 |
hemolymphoid system gland | 2.15e-09 | 23 |
pharyngeal epithelium | 2.15e-09 | 23 |
thymic region | 2.15e-09 | 23 |
pharyngeal gland | 2.15e-09 | 23 |
entire pharyngeal arch endoderm | 2.15e-09 | 23 |
thymus primordium | 2.15e-09 | 23 |
early pharyngeal endoderm | 2.15e-09 | 23 |
gland of gut | 2.73e-09 | 24 |
unilaminar epithelium | 3.75e-09 | 66 |
segment of respiratory tract | 3.91e-08 | 27 |
endo-epithelium | 1.19e-07 | 69 |
cardiovascular system | 2.15e-07 | 23 |
circulatory system | 2.15e-07 | 23 |