FFCP PHASE1:Mm9::chr3:72707564..72707600,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:72707564..72707600,-|id=chr3:72707564..72707600,-|ontology_enrichment_celltype=CL:0000239!7.02e-15!6;CL:0000677!7.02e-15!6;CL:0000212!7.02e-15!6;CL:0000584!7.02e-15!6;CL:0002563!1.08e-13!9;CL:0002251!1.08e-13!9;CL:0000075!9.98e-13!7;CL:0000473!3.28e-11!3;CL:0000627!3.28e-11!3;CL:0000682!3.28e-11!3;CL:0000066!4.46e-10!25;CL:0002076!5.28e-08!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.27e-14,6;CL:0000677,1.27e-14,6;CL:0000584,1.27e-14,6;CL:0000075,1.42e-12,7;CL:0002563,7.86e-10,9;CL:0002251,7.86e-10,9;CL:0000682,5.45e-08,3;CL:0000066,2.30e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.60e-32!15;UBERON:0001242!9.64e-26!13;UBERON:0000060!9.64e-26!13;UBERON:0001262!9.64e-26!13;UBERON:0004786!9.64e-26!13;UBERON:0000160!2.12e-24!43;UBERON:0004923!3.84e-19!24;UBERON:0005409!7.27e-17!59;UBERON:0003350!1.08e-13!9;UBERON:0004808!1.08e-13!9;UBERON:0001277!1.08e-13!9;UBERON:0000331!1.57e-11!3;UBERON:0002116!1.57e-11!3;UBERON:0001204!1.57e-11!3;UBERON:0001168!1.57e-11!3;UBERON:0000485!4.13e-11!11;UBERON:0001962!6.18e-08!2;UBERON:0001961!6.18e-08!2;UBERON:0001744!6.18e-08!2;UBERON:0001007!8.89e-08!128;UBERON:0001555!8.89e-08!128;UBERON:0007026!8.89e-08!128;UBERON:0004119!1.34e-07!130;UBERON:0000925!1.34e-07!130;UBERON:0006595!1.34e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.40e-29,31;UBERON:0005409,1.39e-18,47;UBERON:0000344,3.89e-17,15;UBERON:0001242,8.29e-15,13;UBERON:0001262,8.29e-15,13;UBERON:0004786,8.29e-15,13;UBERON:0002108,2.42e-13,4;UBERON:0004923,1.72e-10,24;UBERON:0003350,7.86e-10,9;UBERON:0004808,7.86e-10,9;UBERON:0001277,7.86e-10,9;UBERON:0000331,1.84e-08,3;UBERON:0002116,1.84e-08,3;UBERON:0001204,1.84e-08,3;UBERON:0001168,1.84e-08,3;UBERON:0000485,4.43e-08,11;UBERON:0001007,1.17e-07,116;UBERON:0001555,1.17e-07,116;UBERON:0007026,1.17e-07,116;UBERON:0004119,1.71e-07,118;UBERON:0000925,1.71e-07,118;UBERON:0006595,1.71e-07,118|phase1_expression=0,1.74487703819681,2.27499619694768,1.81478526784098,1.00179145989269,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.14704640533585,1.14846392823004,0.86152399231815,1.72376986148711,5.51067916423484,2.26827116783938,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.85115396664481,0,0,0,0,0,0,6.64340686162316,0.164698954724011,0,0,0,7.19055526923377,14.6973873914792,5.77509692437665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:72707564..72707600,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:72707564..72707600,- | |||
|description=CAGE_peak_at_chr3:72707564..72707600,- | |||
|id=chr3:72707564..72707600,- | |||
|ontology_enrichment_celltype=CL:0000239!7.02e-15!6;CL:0000677!7.02e-15!6;CL:0000212!7.02e-15!6;CL:0000584!7.02e-15!6;CL:0002563!1.08e-13!9;CL:0002251!1.08e-13!9;CL:0000075!9.98e-13!7;CL:0000473!3.28e-11!3;CL:0000627!3.28e-11!3;CL:0000682!3.28e-11!3;CL:0000066!4.46e-10!25;CL:0002076!5.28e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.27e-14,6;CL:0000677,1.27e-14,6;CL:0000584,1.27e-14,6;CL:0000075,1.42e-12,7;CL:0002563,7.86e-10,9;CL:0002251,7.86e-10,9;CL:0000682,5.45e-08,3;CL:0000066,2.30e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.60e-32!15;UBERON:0001242!9.64e-26!13;UBERON:0000060!9.64e-26!13;UBERON:0001262!9.64e-26!13;UBERON:0004786!9.64e-26!13;UBERON:0000160!2.12e-24!43;UBERON:0004923!3.84e-19!24;UBERON:0005409!7.27e-17!59;UBERON:0003350!1.08e-13!9;UBERON:0004808!1.08e-13!9;UBERON:0001277!1.08e-13!9;UBERON:0000331!1.57e-11!3;UBERON:0002116!1.57e-11!3;UBERON:0001204!1.57e-11!3;UBERON:0001168!1.57e-11!3;UBERON:0000485!4.13e-11!11;UBERON:0001962!6.18e-08!2;UBERON:0001961!6.18e-08!2;UBERON:0001744!6.18e-08!2;UBERON:0001007!8.89e-08!128;UBERON:0001555!8.89e-08!128;UBERON:0007026!8.89e-08!128;UBERON:0004119!1.34e-07!130;UBERON:0000925!1.34e-07!130;UBERON:0006595!1.34e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.40e-29,31;UBERON:0005409,1.39e-18,47;UBERON:0000344,3.89e-17,15;UBERON:0001242,8.29e-15,13;UBERON:0001262,8.29e-15,13;UBERON:0004786,8.29e-15,13;UBERON:0002108,2.42e-13,4;UBERON:0004923,1.72e-10,24;UBERON:0003350,7.86e-10,9;UBERON:0004808,7.86e-10,9;UBERON:0001277,7.86e-10,9;UBERON:0000331,1.84e-08,3;UBERON:0002116,1.84e-08,3;UBERON:0001204,1.84e-08,3;UBERON:0001168,1.84e-08,3;UBERON:0000485,4.43e-08,11;UBERON:0001007,1.17e-07,116;UBERON:0001555,1.17e-07,116;UBERON:0007026,1.17e-07,116;UBERON:0004119,1.71e-07,118;UBERON:0000925,1.71e-07,118;UBERON:0006595,1.71e-07,118 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,1.81478526784098,1.00179145989269,0.503637815735669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.14704640533585,1.14846392823004,0.86152399231815,1.72376986148711,5.51067916423484,2.26827116783938,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.85115396664481,0,0,0,0,0,0,6.64340686162316,0.164698954724011,0,0,0,7.19055526923377,14.6973873914792,5.77509692437665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:72707564..72707600,- | |||
}} |
Latest revision as of 00:03, 4 August 2015
Short description: | p@chr3:72707564..72707600, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:72707564..72707600, - |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.27e-14 | 6 |
gut absorptive cell | 1.27e-14 | 6 |
enterocyte | 1.27e-14 | 6 |
columnar/cuboidal epithelial cell | 1.42e-12 | 7 |
intestinal epithelial cell | 7.86e-10 | 9 |
epithelial cell of alimentary canal | 7.86e-10 | 9 |
M cell of gut | 5.45e-08 | 3 |
epithelial cell | 2.30e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.40e-29 | 31 |
gastrointestinal system | 1.39e-18 | 47 |
mucosa | 3.89e-17 | 15 |
intestinal mucosa | 8.29e-15 | 13 |
wall of intestine | 8.29e-15 | 13 |
gastrointestinal system mucosa | 8.29e-15 | 13 |
small intestine | 2.42e-13 | 4 |
organ component layer | 1.72e-10 | 24 |
epithelium of mucosa | 7.86e-10 | 9 |
gastrointestinal system epithelium | 7.86e-10 | 9 |
intestinal epithelium | 7.86e-10 | 9 |
ileal mucosa | 1.84e-08 | 3 |
ileum | 1.84e-08 | 3 |
mucosa of small intestine | 1.84e-08 | 3 |
wall of small intestine | 1.84e-08 | 3 |
simple columnar epithelium | 4.43e-08 | 11 |
digestive system | 1.17e-07 | 116 |
digestive tract | 1.17e-07 | 116 |
primitive gut | 1.17e-07 | 116 |
endoderm-derived structure | 1.71e-07 | 118 |
endoderm | 1.71e-07 | 118 |
presumptive endoderm | 1.71e-07 | 118 |