FFCP PHASE1:Mm9::chr7:117921068..117921088,+: Difference between revisions
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{{FFCP|EntrezGene=11717|HGNC=|MCL_coexpression_id=3|UniProt=D3Z4N3|association_with_transcript=-115bp_to_ENSMUST00000148292_5end|description=CAGE_peak_13_at_Ampd3_5end|id=chr7:117921068..117921088,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,6.70e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.81e-12,3;DOID:4045,3.81e-12,3|ontology_enrichment_uberon=UBERON:0005156!7.33e-07!26;UBERON:0000990!7.33e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0000474,1.87e-19,9;UBERON:0003975,1.22e-18,5;UBERON:0003134,2.30e-16,8;UBERON:0003100,9.20e-16,11;UBERON:0005795,1.76e-15,4;UBERON:0000995,1.76e-15,4;UBERON:0004175,3.72e-14,9;UBERON:0005631,8.11e-12,3;UBERON:0000478,8.11e-12,3;UBERON:0000158,8.11e-12,3;UBERON:0001987,1.95e-08,2;UBERON:0003124,1.95e-08,2;UBERON:0004340,1.95e-08,2;UBERON:0005156,7.33e-08,26;UBERON:0000990,7.33e-08,26;UBERON:0001134,6.70e-07,9;UBERON:0002036,6.70e-07,9;UBERON:0002385,6.70e-07,9;UBERON:0000486,6.70e-07,9;UBERON:0007503,6.70e-07,9;UBERON:0001015,6.70e-07,9;UBERON:0002329,6.70e-07,9;UBERON:0003082,6.70e-07,9;UBERON:0003059,6.70e-07,9;UBERON:0007282,6.70e-07,9;UBERON:0004290,6.70e-07,9;UBERON:0009618,6.70e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,7.813353445238,9.42342739152837,14.1175557127443,9.56263678941824,15.5363312969969,0,0,0,0,0,0,0,1.39986421625363,0,0,0,0,0.514518872071894,3.72493471920384,0.515672092277442,0,0,0,1.0165335962074,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.906858721281426,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0.890652834388949,0.346970653532272,0.304465478312141,0.230615497256059,0,1.05829836422134,0.251333182659351,4.6967043869531,0.433798070759735,0,0.161766849947409,0.220841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,0.407357455401265,0.373220911830279,1.0108910337347,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,1.80328439914343,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,4.11626247103979,0,0,2.47455184458803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03486947026204,1.07168517515796,0.886701168211368,1.42695054081656,0.658196082408484,0.608929898229199,11.7335854031855,2.1183207086382,0.441056796109924,0.65954501176592,0.484393280087717,0.180938774784468,0.238744688006273,0.328281799490123,0,0,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.410082683163076,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.965947970160952,13.3254557570339,5.12824547948342,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0.564656282491984,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421|short_description=p13@Ampd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11717 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z4N3 | |||
|association_with_transcript=-115bp_to_ENSMUST00000148292_5end | |||
|cluster_id=chr7:117921068..117921088,+ | |||
|description=CAGE_peak_13_at_Ampd3_5end | |||
|id=chr7:117921068..117921088,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,6.70e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.81e-12,3;DOID:4045,3.81e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0005156!7.33e-07!26;UBERON:0000990!7.33e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,1.87e-19,9;UBERON:0003975,1.22e-18,5;UBERON:0003134,2.30e-16,8;UBERON:0003100,9.20e-16,11;UBERON:0005795,1.76e-15,4;UBERON:0000995,1.76e-15,4;UBERON:0004175,3.72e-14,9;UBERON:0005631,8.11e-12,3;UBERON:0000478,8.11e-12,3;UBERON:0000158,8.11e-12,3;UBERON:0001987,1.95e-08,2;UBERON:0003124,1.95e-08,2;UBERON:0004340,1.95e-08,2;UBERON:0005156,7.33e-08,26;UBERON:0000990,7.33e-08,26;UBERON:0001134,6.70e-07,9;UBERON:0002036,6.70e-07,9;UBERON:0002385,6.70e-07,9;UBERON:0000486,6.70e-07,9;UBERON:0007503,6.70e-07,9;UBERON:0001015,6.70e-07,9;UBERON:0002329,6.70e-07,9;UBERON:0003082,6.70e-07,9;UBERON:0003059,6.70e-07,9;UBERON:0007282,6.70e-07,9;UBERON:0004290,6.70e-07,9;UBERON:0009618,6.70e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,7.813353445238,9.42342739152837,14.1175557127443,9.56263678941824,15.5363312969969,0,0,0,0,0,0,0,1.39986421625363,0,0,0,0,0.514518872071894,3.72493471920384,0.515672092277442,0,0,0,1.0165335962074,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.906858721281426,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0.890652834388949,0.346970653532272,0.304465478312141,0.230615497256059,0,1.05829836422134,0.251333182659351,4.6967043869531,0.433798070759735,0,0.161766849947409,0.220841518460394,1.45462575940567,0,0,0,0,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,0.407357455401265,0.373220911830279,1.0108910337347,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,1.80328439914343,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,4.11626247103979,0,0,2.47455184458803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03486947026204,1.07168517515796,0.886701168211368,1.42695054081656,0.658196082408484,0.608929898229199,11.7335854031855,2.1183207086382,0.441056796109924,0.65954501176592,0.484393280087717,0.180938774784468,0.238744688006273,0.328281799490123,0,0,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.410082683163076,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.965947970160952,13.3254557570339,5.12824547948342,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0.564656282491984,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p13@Ampd3 | |||
}} |
Revision as of 01:15, 4 August 2015
Short description: | p13@Ampd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Ampd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -115bp_to_ENSMUST00000148292_5end |
EntrezGene: | 11717 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 6.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
female reproductive system | 1.87e-19 | 9 |
internal female genitalia | 1.22e-18 | 5 |
female reproductive organ | 2.30e-16 | 8 |
female organism | 9.20e-16 | 11 |
embryonic uterus | 1.76e-15 | 4 |
uterus | 1.76e-15 | 4 |
internal genitalia | 3.72e-14 | 9 |
extraembryonic membrane | 8.11e-12 | 3 |
extraembryonic structure | 8.11e-12 | 3 |
membranous layer | 8.11e-12 | 3 |
placenta | 1.95e-08 | 2 |
chorion | 1.95e-08 | 2 |
allantois | 1.95e-08 | 2 |
reproductive structure | 7.33e-08 | 26 |
reproductive system | 7.33e-08 | 26 |
skeletal muscle tissue | 6.70e-07 | 9 |
striated muscle tissue | 6.70e-07 | 9 |
muscle tissue | 6.70e-07 | 9 |
multilaminar epithelium | 6.70e-07 | 9 |
epithelial vesicle | 6.70e-07 | 9 |
musculature | 6.70e-07 | 9 |
somite | 6.70e-07 | 9 |
myotome | 6.70e-07 | 9 |
presomitic mesoderm | 6.70e-07 | 9 |
presumptive segmental plate | 6.70e-07 | 9 |
dermomyotome | 6.70e-07 | 9 |
trunk paraxial mesoderm | 6.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.81e-12 | 3 |
muscle cancer | 3.81e-12 | 3 |