FFCP PHASE1:Mm9::chr5:148241983..148242121,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=72587|HGNC=|UniProt=Q640Q5,F8VPL8|association_with_transcript=-34bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end|description=CAGE_peak_2_at_Pan3_5end|id=chr5:148241983..148242121,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!9.42e-10!126;UBERON:0004185!9.42e-10!126;UBERON:0004119!1.48e-09!130;UBERON:0000925!1.48e-09!130;UBERON:0006595!1.48e-09!130;UBERON:0001007!1.78e-09!128;UBERON:0001555!1.78e-09!128;UBERON:0007026!1.78e-09!128;UBERON:0005409!2.79e-07!59;UBERON:0000160!4.48e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.99e-08,114;UBERON:0004119,9.19e-08,118;UBERON:0000925,9.19e-08,118;UBERON:0006595,9.19e-08,118;UBERON:0001007,1.08e-07,116;UBERON:0001555,1.08e-07,116;UBERON:0007026,1.08e-07,116|phase1_expression=11.0502704502308,18.1467211972468,17.7449703361919,22.6848158480123,30.5546395267272,16.4521686473652,16.5864974822823,16.2695387536386,17.8801677132617,33.2371627377231,4.96532107853964,12.0455960082958,14.2096605842901,16.7847172644475,10.3264026162855,10.7311891716608,2.79824751251259,14.6689906891581,17.5506475015346,16.1268067683251,22.4514285998824,6.95036658406197,6.26879493933445,9.75953779039781,9.1763712426868,14.9300310669905,15.5074318617267,14.0056301245828,14.4417798786844,12.6015064879965,13.082100128663,2.54012269383853,4.92051830067656,0,8.08784535303569,9.80784407615105,11.2293145944303,3.76678467663217,7.0320181007142,2.61761871986899,8.82347232046521,6.83045484958446,3.88408282424923,9.81995180209503,10.0363161907319,4.77221555620372,10.9534788208725,5.45062890951116,5.93152693383074,5.44403717407994,7.97922603264566,2.87505128729943,14.4293041209653,15.9579671242496,13.779845764841,7.97504251711436,9.45560351797897,7.21940929188419,11.3297218081375,6.34789175126439,8.23980824558033,3.38844532069132,4.4464739805557,5.84934816232909,7.9109309005358,6.3943210345149,5.69240209984969,5.76327457982332,9.64313394468842,7.83034442323806,4.83747411108179,3.42781181284564,4.41737081903227,4.89963196859816,9.87208351487835,3.67687514644008,4.40463523997555,6.12899222808901,3.84016333140609,9.49581271657396,8.23388792421687,9.89735404057844,6.70039197603314,6.19038871034848,5.50073691996516,5.89257170947335,9.39653093274079,7.45597783301202,11.8890123533099,9.52201657345497,37.1026545538148,11.185510400758,8.15965600449301,3.2382191498269,9.74664626171504,7.16843019355737,8.84799846830037,9.20323741921512,7.53379413348319,7.42013106471715,12.1125341007945,14.115912515575,2.54805239706646,21.3320010945999,3.68034769719064,5.06719730950197,4.54972000513305,13.0169622879728,16.572024553419,10.2425075954729,9.1947223186052,7.61163695780353,8.76338889573022,6.48107354376277,10.1126288136706,11.4356598110005,16.8092578059374,15.0383331196708,9.73071607144862,12.7795811458453,11.0420759230197,15.5160081003271,11.1835056730873,22.8369021669007,26.1808383516819,14.3055950916811,12.7004031976275,5.99902730993408,8.00542430560307,5.84183493678809,6.8625090422794,9.67538511269056,7.99591872884472,7.92717917724025,7.06479351502504,7.62533936418461,10.4894544765826,15.7996852674818,21.4814344668623,13.2578369208479,5.20481771850815,8.27647575960503,7.56260945182467,9.49440352365005,14.8319568149895,10.1209839025031,13.118241438362,18.3679393224701,6.68260778091811,7.56424320671277,7.03804496655795,7.89104636739269,13.9023624612799,8.70630416305416,15.2278780941878,11.3449532086541,4.91549231119264,5.91900186363845,5.68326998791185,6.62802472113606,6.80125573945179,9.90341338035582,8.99629995223799,10.8220327461072,10.181629450567,9.76642567951713,11.5357562601836,10.6256461554124,12.671108443338,11.8200574136949,12.5656654796076,10.6725990820493,10.0993053033883,9.12603647570528,7.57043814830858,10.5991750750663,15.1992640172547,12.4291766331866,7.25180051819795,10.2184135618593,13.9176858227861,15.5296313959974,15.1217069814512,9.13083005340284,18.0321043386914,11.5289268306808,12.3154252312132,16.1154742353332,12.6726656627428,15.2799299471218,12.752144942607,15.3338780405863,8.34538764193559,11.6533482861923,16.9061603509621,12.2190796707189,10.4734343070518,14.7986579968572,19.16067074865,17.8608279055319,12.7168969551514,14.0672766870853,7.11486305009157,9.34332592010127,11.9900987019054,10.1187950573184,9.33156558387113,11.8176808278684,10.6942857748196,9.20627639842594,12.9708181420028,5.76578967694971,15.814502718009,8.18710084870708,7.48890415474945,10.1031551178845,8.96987067609561,12.0610880340842,18.2905658264939,9.85355341206521,10.1038285394056,7.97801903143384,8.44884893838608,12.8979818230198,10.7119638398706,26.147908812945,16.8669604193624,16.3883870340093,19.9318460821859,19.0081445070256,16.577758259126,17.7918342055259,12.0633027151418,9.79030230873677,12.2941068254759,16.2802680319792,5.9403718295483,6.91548950893999,5.08198330667694,7.82659874333556,6.62567260774139,7.02789739733949,8.83235930704476,7.40803273652911,8.24355094104858,11.0399847007645,9.31064613852257,9.35218745316198,5.13874111330481,11.2462460747632,15.329529202493,6.23229612835393,12.0536349921646,19.4664745107592,17.2568679841952,6.31229654002952,10.5813244937663,10.1846743068185,8.56375489354241,14.4494519533646,18.6068371081119,13.4507479906677,14.2598951353889,16.7499481705982,17.9211634577498,16.5016869197099,17.702859499197,9.18311579559682,7.63216234318252,10.502514716548,13.4778577568128,11.0588666913284,10.86023535974,12.4830629136986,9.1521966144847,14.4045808187398,21.3912546113313,22.0947578941583,18.4069446433332,17.3098094543807,12.1759790883199,12.8029901801148,12.5336759750836,4.45020724825223,12.9861869406368,11.9704383418669,9.25972636848558,8.4765805652111,12.1657862671712,8.69357058184786,13.5982743995084,12.1757763521582,14.5109972494645,10.5013767981662,7.43389584915668,14.0290432317526,13.068646239438,13.5907392409405,12.0099410060398,15.1048067950999,15.9521169549898,10.9937495633292,14.1280320888054,13.6694648879124,47.9138997881562,7.62534384824292,6.45288112782681,7.97249872210595,7.4912697617084,8.95467465101124,11.3836521486381,12.2392121753313,10.3810750981454,14.0118790079084,30.8192106695916,16.1165671520371,8.10900861160657,6.98434508720825,7.9251702016455,10.3835483487139,12.5169253512197,15.505212988076,14.325884135934,12.1159739937777,15.012740911035,14.8214492151156,16.9576712487169,15.778742029014,14.9602434792408,12.6969014824518,1.99787358036658,2.51198798506532,1.51096154727671,18.1598218390259,14.2638681342898,15.0184331899157,15.6488916727718,23.0723167856267,8.471277639256,3.68260189205742,6.87474616127276,6.8741272937475,1.37016503954128,3.7769694869485,4.05013500139084,5.85417564191487,8.15656336171568,8.80192529978094,5.70830411712972,11.5717213286299,8.36594668195257,11.6691224192781,10.4806581313991,8.64064489715066,10.6678429344775,11.1258930909003,11.8740107548972,10.1078884705519,13.4344028941827,11.1289541417785,12.0797544636148,15.0459108151443,14.2439963009921,9.52587382566147,12.1678542242098,13.5036454324594,8.65380391686944,11.3343168503486,7.88599280486455,7.45398385869217,10.2527561677348,10.9009812474246,13.081203877731,12.8614203995348,12.8049581010941,7.89209134313529,10.4569167661314,11.7839877048125,15.8970924286393,13.5936185678278,6.13846564754534,9.14127362997199,13.5034627686799,9.49280196164194,10.9947855969342,15.6855869455258,13.1988949127502,11.0295709559758,10.6659204385394|short_description=p2@Pan3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72587 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q640Q5,uniprot:F8VPL8 | |||
|association_with_transcript=-34bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end | |||
|cluster_id=chr5:148241983..148242121,+ | |||
|description=CAGE_peak_2_at_Pan3_5end | |||
|id=chr5:148241983..148242121,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!9.42e-10!126;UBERON:0004185!9.42e-10!126;UBERON:0004119!1.48e-09!130;UBERON:0000925!1.48e-09!130;UBERON:0006595!1.48e-09!130;UBERON:0001007!1.78e-09!128;UBERON:0001555!1.78e-09!128;UBERON:0007026!1.78e-09!128;UBERON:0005409!2.79e-07!59;UBERON:0000160!4.48e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.99e-08,114;UBERON:0004119,9.19e-08,118;UBERON:0000925,9.19e-08,118;UBERON:0006595,9.19e-08,118;UBERON:0001007,1.08e-07,116;UBERON:0001555,1.08e-07,116;UBERON:0007026,1.08e-07,116 | |||
|phase1_expression=11.0502704502308,18.1467211972468,17.7449703361919,22.6848158480123,30.5546395267272,16.4521686473652,16.5864974822823,16.2695387536386,17.8801677132617,33.2371627377231,4.96532107853964,12.0455960082958,14.2096605842901,16.7847172644475,10.3264026162855,10.7311891716608,2.79824751251259,14.6689906891581,17.5506475015346,16.1268067683251,22.4514285998824,6.95036658406197,6.26879493933445,9.75953779039781,9.1763712426868,14.9300310669905,15.5074318617267,14.0056301245828,14.4417798786844,12.6015064879965,13.082100128663,2.54012269383853,4.92051830067656,0,8.08784535303569,9.80784407615105,11.2293145944303,3.76678467663217,7.0320181007142,2.61761871986899,8.82347232046521,6.83045484958446,3.88408282424923,9.81995180209503,10.0363161907319,4.77221555620372,10.9534788208725,5.45062890951116,5.93152693383074,5.44403717407994,7.97922603264566,2.87505128729943,14.4293041209653,15.9579671242496,13.779845764841,7.97504251711436,9.45560351797897,7.21940929188419,11.3297218081375,6.34789175126439,8.23980824558033,3.38844532069132,4.4464739805557,5.84934816232909,7.9109309005358,6.3943210345149,5.69240209984969,5.76327457982332,9.64313394468842,7.83034442323806,4.83747411108179,3.42781181284564,4.41737081903227,4.89963196859816,9.87208351487835,3.67687514644008,4.40463523997555,6.12899222808901,3.84016333140609,9.49581271657396,8.23388792421687,9.89735404057844,6.70039197603314,6.19038871034848,5.50073691996516,5.89257170947335,9.39653093274079,7.45597783301202,11.8890123533099,9.52201657345497,37.1026545538148,11.185510400758,8.15965600449301,3.2382191498269,9.74664626171504,7.16843019355737,8.84799846830037,9.20323741921512,7.53379413348319,7.42013106471715,12.1125341007945,14.115912515575,2.54805239706646,21.3320010945999,3.68034769719064,5.06719730950197,4.54972000513305,13.0169622879728,16.572024553419,10.2425075954729,9.1947223186052,7.61163695780353,8.76338889573022,6.48107354376277,10.1126288136706,11.4356598110005,16.8092578059374,15.0383331196708,9.73071607144862,12.7795811458453,11.0420759230197,15.5160081003271,11.1835056730873,22.8369021669007,26.1808383516819,14.3055950916811,12.7004031976275,5.99902730993408,8.00542430560307,5.84183493678809,6.8625090422794,9.67538511269056,7.99591872884472,7.92717917724025,7.06479351502504,7.62533936418461,10.4894544765826,15.7996852674818,21.4814344668623,13.2578369208479,5.20481771850815,8.27647575960503,7.56260945182467,9.49440352365005,14.8319568149895,10.1209839025031,13.118241438362,18.3679393224701,6.68260778091811,7.56424320671277,7.03804496655795,7.89104636739269,13.9023624612799,8.70630416305416,15.2278780941878,11.3449532086541,4.91549231119264,5.91900186363845,5.68326998791185,6.62802472113606,6.80125573945179,9.90341338035582,8.99629995223799,10.8220327461072,10.181629450567,9.76642567951713,11.5357562601836,10.6256461554124,12.671108443338,11.8200574136949,12.5656654796076,10.6725990820493,10.0993053033883,9.12603647570528,7.57043814830858,10.5991750750663,15.1992640172547,12.4291766331866,7.25180051819795,10.2184135618593,13.9176858227861,15.5296313959974,15.1217069814512,9.13083005340284,18.0321043386914,11.5289268306808,12.3154252312132,16.1154742353332,12.6726656627428,15.2799299471218,12.752144942607,15.3338780405863,8.34538764193559,11.6533482861923,16.9061603509621,12.2190796707189,10.4734343070518,14.7986579968572,19.16067074865,17.8608279055319,12.7168969551514,14.0672766870853,7.11486305009157,9.34332592010127,11.9900987019054,10.1187950573184,9.33156558387113,11.8176808278684,10.6942857748196,9.20627639842594,12.9708181420028,5.76578967694971,15.814502718009,8.18710084870708,7.48890415474945,10.1031551178845,8.96987067609561,12.0610880340842,18.2905658264939,9.85355341206521,10.1038285394056,7.97801903143384,8.44884893838608,12.8979818230198,10.7119638398706,26.147908812945,16.8669604193624,16.3883870340093,19.9318460821859,19.0081445070256,16.577758259126,17.7918342055259,12.0633027151418,9.79030230873677,12.2941068254759,16.2802680319792,5.9403718295483,6.91548950893999,5.08198330667694,7.82659874333556,6.62567260774139,7.02789739733949,8.83235930704476,7.40803273652911,8.24355094104858,11.0399847007645,9.31064613852257,9.35218745316198,5.13874111330481,11.2462460747632,15.329529202493,6.23229612835393,12.0536349921646,19.4664745107592,17.2568679841952,6.31229654002952,10.5813244937663,10.1846743068185,8.56375489354241,14.4494519533646,18.6068371081119,13.4507479906677,14.2598951353889,16.7499481705982,17.9211634577498,16.5016869197099,17.702859499197,9.18311579559682,7.63216234318252,10.502514716548,13.4778577568128,11.0588666913284,10.86023535974,12.4830629136986,9.1521966144847,14.4045808187398,21.3912546113313,22.0947578941583,18.4069446433332,17.3098094543807,12.1759790883199,12.8029901801148,12.5336759750836,4.45020724825223,12.9861869406368,11.9704383418669,9.25972636848558,8.4765805652111,12.1657862671712,8.69357058184786,13.5982743995084,12.1757763521582,14.5109972494645,10.5013767981662,7.43389584915668,14.0290432317526,13.068646239438,13.5907392409405,12.0099410060398,15.1048067950999,15.9521169549898,10.9937495633292,14.1280320888054,13.6694648879124,47.9138997881562,7.62534384824292,6.45288112782681,7.97249872210595,7.4912697617084,8.95467465101124,11.3836521486381,12.2392121753313,10.3810750981454,14.0118790079084,30.8192106695916,16.1165671520371,8.10900861160657,6.98434508720825,7.9251702016455,10.3835483487139,12.5169253512197,15.505212988076,14.325884135934,12.1159739937777,15.012740911035,14.8214492151156,16.9576712487169,15.778742029014,14.9602434792408,12.6969014824518,1.99787358036658,2.51198798506532,1.51096154727671,18.1598218390259,14.2638681342898,15.0184331899157,15.6488916727718,23.0723167856267,8.471277639256,3.68260189205742,6.87474616127276,6.8741272937475,1.37016503954128,3.7769694869485,4.05013500139084,5.85417564191487,8.15656336171568,8.80192529978094,5.70830411712972,11.5717213286299,8.36594668195257,11.6691224192781,10.4806581313991,8.64064489715066,10.6678429344775,11.1258930909003,11.8740107548972,10.1078884705519,13.4344028941827,11.1289541417785,12.0797544636148,15.0459108151443,14.2439963009921,9.52587382566147,12.1678542242098,13.5036454324594,8.65380391686944,11.3343168503486,7.88599280486455,7.45398385869217,10.2527561677348,10.9009812474246,13.081203877731,12.8614203995348,12.8049581010941,7.89209134313529,10.4569167661314,11.7839877048125,15.8970924286393,13.5936185678278,6.13846564754534,9.14127362997199,13.5034627686799,9.49280196164194,10.9947855969342,15.6855869455258,13.1988949127502,11.0295709559758,10.6659204385394 | |||
|short_description=p2@Pan3 | |||
}} |
Revision as of 02:07, 4 August 2015
Short description: | p2@Pan3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pan3_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENSMUST00000031651, ENSMUST00000085571, NM_028291, uc009aod.2_5end |
EntrezGene: | 72587 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.99e-08 | 114 |
endoderm-derived structure | 9.19e-08 | 118 |
endoderm | 9.19e-08 | 118 |
presumptive endoderm | 9.19e-08 | 118 |
digestive system | 1.08e-07 | 116 |
digestive tract | 1.08e-07 | 116 |
primitive gut | 1.08e-07 | 116 |