FFCP PHASE1:Mm9::chr2:132771611..132771620,-: Difference between revisions
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{{FFCP|EntrezGene=241639|HGNC=|MCL_coexpression_id=72|UniProt=P59113|association_with_transcript=21bp_to_ENSMUST00000038280_5end|description=CAGE_peak_12_at_Fermt1_5end|id=chr2:132771611..132771620,-|ontology_enrichment_celltype=CL:0002076!4.15e-09!15;CL:0000066!4.48e-08!25;CL:0002563!9.03e-08!9;CL:0002251!9.03e-08!9|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0002076,6.76e-10,15;CL:0000066,5.60e-09,25;CL:0000223,1.71e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.79e-16!59;UBERON:0000160!2.54e-15!43;UBERON:0000344!3.55e-13!15;UBERON:0001242!1.12e-10!13;UBERON:0000060!1.12e-10!13;UBERON:0001262!1.12e-10!13;UBERON:0004786!1.12e-10!13;UBERON:0001007!1.18e-08!128;UBERON:0001555!1.18e-08!128;UBERON:0007026!1.18e-08!128;UBERON:0004119!2.34e-08!130;UBERON:0000925!2.34e-08!130;UBERON:0006595!2.34e-08!130;UBERON:0003350!9.03e-08!9;UBERON:0004808!9.03e-08!9;UBERON:0001277!9.03e-08!9;UBERON:0004921!1.80e-07!126;UBERON:0004185!1.80e-07!126;UBERON:0004923!5.38e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0000160,4.68e-07,31|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.45881856213434,0.57423196411502,0.430761996159075,1.07735616342945,1.33016393619462,0,0.665191531965914,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32982082022428,7.85415582972806,6.0662933401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,1.00534083520108,0.795825888164603,0.19496408711912,0,0.216138049874694,1.39398891278057,0.189667900953082,0,0,0,0,0,0.189709611372772,0.442830443938806,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.241251699712623,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.330613822901344,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.56412273974171,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p12@Fermt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241639 | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P59113 | |||
|association_with_transcript=21bp_to_ENSMUST00000038280_5end | |||
|cluster_id=chr2:132771611..132771620,- | |||
|description=CAGE_peak_12_at_Fermt1_5end | |||
|id=chr2:132771611..132771620,- | |||
|ontology_enrichment_celltype=CL:0002076!4.15e-09!15;CL:0000066!4.48e-08!25;CL:0002563!9.03e-08!9;CL:0002251!9.03e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0002076,6.76e-10,15;CL:0000066,5.60e-09,25;CL:0000223,1.71e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.79e-16!59;UBERON:0000160!2.54e-15!43;UBERON:0000344!3.55e-13!15;UBERON:0001242!1.12e-10!13;UBERON:0000060!1.12e-10!13;UBERON:0001262!1.12e-10!13;UBERON:0004786!1.12e-10!13;UBERON:0001007!1.18e-08!128;UBERON:0001555!1.18e-08!128;UBERON:0007026!1.18e-08!128;UBERON:0004119!2.34e-08!130;UBERON:0000925!2.34e-08!130;UBERON:0006595!2.34e-08!130;UBERON:0003350!9.03e-08!9;UBERON:0004808!9.03e-08!9;UBERON:0001277!9.03e-08!9;UBERON:0004921!1.80e-07!126;UBERON:0004185!1.80e-07!126;UBERON:0004923!5.38e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0000160,4.68e-07,31 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.45881856213434,0.57423196411502,0.430761996159075,1.07735616342945,1.33016393619462,0,0.665191531965914,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32982082022428,7.85415582972806,6.0662933401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,1.00534083520108,0.795825888164603,0.19496408711912,0,0.216138049874694,1.39398891278057,0.189667900953082,0,0,0,0,0,0.189709611372772,0.442830443938806,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.241251699712623,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.330613822901344,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.56412273974171,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p12@Fermt1 | |||
}} |
Revision as of 02:58, 4 August 2015
Short description: | p12@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 21bp_to_ENSMUST00000038280_5end |
EntrezGene: | 241639 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of tracheobronchial tree | 7.38e-28 | 3 |
branched duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of lower respiratory tract | 7.38e-28 | 3 |
respiratory epithelial cell | 7.38e-28 | 3 |
tracheal epithelial cell | 7.38e-28 | 3 |
tracheoblast | 7.38e-28 | 3 |
endo-epithelial cell | 6.76e-10 | 15 |
epithelial cell | 5.60e-09 | 25 |
endodermal cell | 1.71e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.38e-28 | 3 |
respiratory airway | 7.38e-28 | 3 |
tracheobronchial tree | 7.38e-28 | 3 |
lower respiratory tract | 7.38e-28 | 3 |
intestine | 4.68e-07 | 31 |