FFCP PHASE1:Mm9::chr2:132771788..132771802,-: Difference between revisions
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{{FFCP|EntrezGene=241639|HGNC=|MCL_coexpression_id=2285|UniProt=E9Q7J9,P59113|association_with_transcript=-16bp_to_ENSMUST00000165948,NM_198029,uc008mno.1,uc008mnp.1_5end|description=CAGE_peak_2_at_Fermt1_5end|id=chr2:132771788..132771802,-|ontology_enrichment_celltype=CL:0002563!1.72e-07!9;CL:0002251!1.72e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.65e-10,9;CL:0002251,1.65e-10,9;CL:0000066,2.20e-07,25;CL:0002076,6.83e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.79e-27!59;UBERON:0000160!7.77e-27!43;UBERON:0001007!1.06e-13!128;UBERON:0001555!1.06e-13!128;UBERON:0007026!1.06e-13!128;UBERON:0004119!1.32e-13!130;UBERON:0000925!1.32e-13!130;UBERON:0006595!1.32e-13!130;UBERON:0004921!1.41e-12!126;UBERON:0004185!1.41e-12!126;UBERON:0000344!3.18e-12!15;UBERON:0001242!1.01e-10!13;UBERON:0000060!1.01e-10!13;UBERON:0001262!1.01e-10!13;UBERON:0004786!1.01e-10!13;UBERON:0002108!1.01e-07!16;UBERON:0003350!1.72e-07!9;UBERON:0004808!1.72e-07!9;UBERON:0001277!1.72e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.27e-39,47;UBERON:0000160,1.41e-35,31;UBERON:0000344,5.53e-19,15;UBERON:0001242,2.82e-16,13;UBERON:0001262,2.82e-16,13;UBERON:0004786,2.82e-16,13;UBERON:0001007,9.89e-13,116;UBERON:0001555,9.89e-13,116;UBERON:0007026,9.89e-13,116;UBERON:0004119,2.52e-12,118;UBERON:0000925,2.52e-12,118;UBERON:0006595,2.52e-12,118;UBERON:0004921,3.16e-11,114;UBERON:0003350,1.65e-10,9;UBERON:0004808,1.65e-10,9;UBERON:0001277,1.65e-10,9;UBERON:0004923,2.40e-10,24;UBERON:0000485,2.83e-08,11;UBERON:0002108,2.73e-07,4;UBERON:0001264,6.07e-07,12|phase1_expression=0,2.79180326111489,0.454999239389536,2.41971369045464,2.00358291978539,8.05820505177071,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,5.59973479776923,6.42345986988076,3.44539178469012,2.58457197695445,5.60225204983311,7.9809836171677,6.5527833737582,6.20845429834853,0,0,0,12.1317680295535,7.64679368649065,7.75843553797003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,1.29894624606728,0.506719730950197,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.775258509631,0,0,6.89734049063197,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0.611036183101898,0.622034853050465,0.758168275301024,0.841767423545896,0.390361328888111,0,0,0.150704817835715,0,0,0,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,4.23120906661671,0.426576501070468,0.464473343720877,3.35055399437443,2.21851877085677,3.33567065767305,6.08722003560189,4.74529061544512,3.12928013975621,8.04272668160862,5.76973768919337,10.1381325301942,5.39291645192533,7.5648317456143,10.5544874824815,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,1.45444035385792,2.50937251565324,1.72698600625512,1.23397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.890328018336276,0,4.78413356620353,3.98235415019888,0,1.51161778482376,1.13163047853539,2.36241514304618,1.22974059177571,1.55056975900933,2.54473610634254,1.78248689192361,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0.661585194164886,0.16488625294148,1.29171541356724,0.361877549568935,0.238744688006273,0,7.86998258900597,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,2.03319467126849,2.37611749807963,3.13632444021703,4.58561383866973,3.77620169877498,4.21532624199213,4.18809507174447,12.4430374360121,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.537080087002444,0.596044064343795,0.120195449519969,0.295379054349154,0.201932899896295,0,0.302478555410522,0.584747284438515,0.288635524920988,0.116876902181569,0.680191150845634,0.665957860122194,0,0,0.386379188064381,0.93841237725591,6.59345847362154,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.128050304809739,0.516919220600519,0.476293691283074,0.347652977834566,0.77163688185482,0,0.441596760403192,0.685738504770831,0.532427418478012,0,0.436039249896986,0.376437521661322,0.338458431566706,0,0,0.679020569229309,1.12228454331548,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0.661774257358546,0|short_description=p2@Fermt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241639 | |||
|HGNC= | |||
|MCL_coexpression_id=2285 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q7J9,uniprot:P59113 | |||
|association_with_transcript=-16bp_to_ENSMUST00000165948,NM_198029,uc008mno.1,uc008mnp.1_5end | |||
|cluster_id=chr2:132771788..132771802,- | |||
|description=CAGE_peak_2_at_Fermt1_5end | |||
|id=chr2:132771788..132771802,- | |||
|ontology_enrichment_celltype=CL:0002563!1.72e-07!9;CL:0002251!1.72e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.65e-10,9;CL:0002251,1.65e-10,9;CL:0000066,2.20e-07,25;CL:0002076,6.83e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.79e-27!59;UBERON:0000160!7.77e-27!43;UBERON:0001007!1.06e-13!128;UBERON:0001555!1.06e-13!128;UBERON:0007026!1.06e-13!128;UBERON:0004119!1.32e-13!130;UBERON:0000925!1.32e-13!130;UBERON:0006595!1.32e-13!130;UBERON:0004921!1.41e-12!126;UBERON:0004185!1.41e-12!126;UBERON:0000344!3.18e-12!15;UBERON:0001242!1.01e-10!13;UBERON:0000060!1.01e-10!13;UBERON:0001262!1.01e-10!13;UBERON:0004786!1.01e-10!13;UBERON:0002108!1.01e-07!16;UBERON:0003350!1.72e-07!9;UBERON:0004808!1.72e-07!9;UBERON:0001277!1.72e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.27e-39,47;UBERON:0000160,1.41e-35,31;UBERON:0000344,5.53e-19,15;UBERON:0001242,2.82e-16,13;UBERON:0001262,2.82e-16,13;UBERON:0004786,2.82e-16,13;UBERON:0001007,9.89e-13,116;UBERON:0001555,9.89e-13,116;UBERON:0007026,9.89e-13,116;UBERON:0004119,2.52e-12,118;UBERON:0000925,2.52e-12,118;UBERON:0006595,2.52e-12,118;UBERON:0004921,3.16e-11,114;UBERON:0003350,1.65e-10,9;UBERON:0004808,1.65e-10,9;UBERON:0001277,1.65e-10,9;UBERON:0004923,2.40e-10,24;UBERON:0000485,2.83e-08,11;UBERON:0002108,2.73e-07,4;UBERON:0001264,6.07e-07,12 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,2.41971369045464,2.00358291978539,8.05820505177071,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,5.59973479776923,6.42345986988076,3.44539178469012,2.58457197695445,5.60225204983311,7.9809836171677,6.5527833737582,6.20845429834853,0,0,0,12.1317680295535,7.64679368649065,7.75843553797003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,1.29894624606728,0.506719730950197,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.775258509631,0,0,6.89734049063197,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0.611036183101898,0.622034853050465,0.758168275301024,0.841767423545896,0.390361328888111,0,0,0.150704817835715,0,0,0,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,4.23120906661671,0.426576501070468,0.464473343720877,3.35055399437443,2.21851877085677,3.33567065767305,6.08722003560189,4.74529061544512,3.12928013975621,8.04272668160862,5.76973768919337,10.1381325301942,5.39291645192533,7.5648317456143,10.5544874824815,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.210407459670956,1.45444035385792,2.50937251565324,1.72698600625512,1.23397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.890328018336276,0,4.78413356620353,3.98235415019888,0,1.51161778482376,1.13163047853539,2.36241514304618,1.22974059177571,1.55056975900933,2.54473610634254,1.78248689192361,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0.661585194164886,0.16488625294148,1.29171541356724,0.361877549568935,0.238744688006273,0,7.86998258900597,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,2.03319467126849,2.37611749807963,3.13632444021703,4.58561383866973,3.77620169877498,4.21532624199213,4.18809507174447,12.4430374360121,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.537080087002444,0.596044064343795,0.120195449519969,0.295379054349154,0.201932899896295,0,0.302478555410522,0.584747284438515,0.288635524920988,0.116876902181569,0.680191150845634,0.665957860122194,0,0,0.386379188064381,0.93841237725591,6.59345847362154,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.128050304809739,0.516919220600519,0.476293691283074,0.347652977834566,0.77163688185482,0,0.441596760403192,0.685738504770831,0.532427418478012,0,0.436039249896986,0.376437521661322,0.338458431566706,0,0,0.679020569229309,1.12228454331548,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0.661774257358546,0 | |||
|short_description=p2@Fermt1 | |||
}} |
Revision as of 02:58, 4 August 2015
Short description: | p2@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2285 |
Association with transcript: | -16bp_to_ENSMUST00000165948, NM_198029, uc008mno.1, uc008mnp.1_5end |
EntrezGene: | 241639 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.65e-10 | 9 |
epithelial cell of alimentary canal | 1.65e-10 | 9 |
epithelial cell | 2.20e-07 | 25 |
endo-epithelial cell | 6.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.27e-39 | 47 |
intestine | 1.41e-35 | 31 |
mucosa | 5.53e-19 | 15 |
intestinal mucosa | 2.82e-16 | 13 |
wall of intestine | 2.82e-16 | 13 |
gastrointestinal system mucosa | 2.82e-16 | 13 |
digestive system | 9.89e-13 | 116 |
digestive tract | 9.89e-13 | 116 |
primitive gut | 9.89e-13 | 116 |
endoderm-derived structure | 2.52e-12 | 118 |
endoderm | 2.52e-12 | 118 |
presumptive endoderm | 2.52e-12 | 118 |
subdivision of digestive tract | 3.16e-11 | 114 |
epithelium of mucosa | 1.65e-10 | 9 |
gastrointestinal system epithelium | 1.65e-10 | 9 |
intestinal epithelium | 1.65e-10 | 9 |
organ component layer | 2.40e-10 | 24 |
simple columnar epithelium | 2.83e-08 | 11 |
small intestine | 2.73e-07 | 4 |
pancreas | 6.07e-07 | 12 |