FFCP PHASE1:Mm9::chr16:8783471..8783495,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=725|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:8783471..8783495,-|id=chr16:8783471..8783495,-|ontology_enrichment_celltype=CL:0000349!3.34e-12!3;CL:0000351!3.34e-12!3|ontology_enrichment_celltype_v019_2=CL:0000349,2.12e-25,3;CL:0000351,2.12e-25,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!3.52e-22!24;UBERON:0000991!1.50e-21!18;UBERON:0005564!1.50e-21!18;UBERON:0005156!2.77e-20!26;UBERON:0000990!2.77e-20!26;UBERON:0000473!3.78e-19!14;UBERON:0004176!4.67e-19!17;UBERON:0009196!4.67e-19!17;UBERON:0009117!4.67e-19!17;UBERON:0003135!8.94e-18!15;UBERON:0003101!1.42e-16!16;UBERON:0000079!1.42e-16!16;UBERON:0000358!3.34e-12!3;UBERON:0000307!3.34e-12!3;UBERON:0005631!2.57e-11!3;UBERON:0000478!2.57e-11!3;UBERON:0000158!2.57e-11!3;UBERON:0002323!2.57e-11!37;UBERON:0004458!2.57e-11!37;UBERON:0003886!5.85e-11!38;UBERON:0002553!1.27e-10!39;UBERON:0001987!5.98e-08!2;UBERON:0003124!5.98e-08!2;UBERON:0004340!5.98e-08!2;UBERON:0000464!8.36e-08!57|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.12e-25,3;UBERON:0000307,2.12e-25,3;UBERON:0007010,2.12e-25,3;UBERON:0000473,2.56e-14,14;UBERON:0003135,2.27e-13,15;UBERON:0003101,1.54e-12,16;UBERON:0000079,1.54e-12,16;UBERON:0004176,8.32e-12,17;UBERON:0009196,8.32e-12,17;UBERON:0009117,8.32e-12,17;UBERON:0003133,9.55e-12,24;UBERON:0005631,2.23e-11,3;UBERON:0000478,2.23e-11,3;UBERON:0000158,2.23e-11,3;UBERON:0000991,3.74e-11,18;UBERON:0005564,3.74e-11,18;UBERON:0005156,7.88e-11,26;UBERON:0000990,7.88e-11,26;UBERON:0000305,3.04e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,1.48316980640624,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,0.747582730219894,0.827292452285488,0,0.129159823477731,0.337912250981556,0,1.0416350787516,1.46803082195995,3.38217769156408,2.30424005006292,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,4.66170502085536,6.81825310232015,3.35769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:8783471..8783495,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=725 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:8783471..8783495,- | |||
|description=CAGE_peak_at_chr16:8783471..8783495,- | |||
|id=chr16:8783471..8783495,- | |||
|ontology_enrichment_celltype=CL:0000349!3.34e-12!3;CL:0000351!3.34e-12!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.12e-25,3;CL:0000351,2.12e-25,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!3.52e-22!24;UBERON:0000991!1.50e-21!18;UBERON:0005564!1.50e-21!18;UBERON:0005156!2.77e-20!26;UBERON:0000990!2.77e-20!26;UBERON:0000473!3.78e-19!14;UBERON:0004176!4.67e-19!17;UBERON:0009196!4.67e-19!17;UBERON:0009117!4.67e-19!17;UBERON:0003135!8.94e-18!15;UBERON:0003101!1.42e-16!16;UBERON:0000079!1.42e-16!16;UBERON:0000358!3.34e-12!3;UBERON:0000307!3.34e-12!3;UBERON:0005631!2.57e-11!3;UBERON:0000478!2.57e-11!3;UBERON:0000158!2.57e-11!3;UBERON:0002323!2.57e-11!37;UBERON:0004458!2.57e-11!37;UBERON:0003886!5.85e-11!38;UBERON:0002553!1.27e-10!39;UBERON:0001987!5.98e-08!2;UBERON:0003124!5.98e-08!2;UBERON:0004340!5.98e-08!2;UBERON:0000464!8.36e-08!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.12e-25,3;UBERON:0000307,2.12e-25,3;UBERON:0007010,2.12e-25,3;UBERON:0000473,2.56e-14,14;UBERON:0003135,2.27e-13,15;UBERON:0003101,1.54e-12,16;UBERON:0000079,1.54e-12,16;UBERON:0004176,8.32e-12,17;UBERON:0009196,8.32e-12,17;UBERON:0009117,8.32e-12,17;UBERON:0003133,9.55e-12,24;UBERON:0005631,2.23e-11,3;UBERON:0000478,2.23e-11,3;UBERON:0000158,2.23e-11,3;UBERON:0000991,3.74e-11,18;UBERON:0005564,3.74e-11,18;UBERON:0005156,7.88e-11,26;UBERON:0000990,7.88e-11,26;UBERON:0000305,3.04e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,1.48316980640624,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,0.747582730219894,0.827292452285488,0,0.129159823477731,0.337912250981556,0,1.0416350787516,1.46803082195995,3.38217769156408,2.30424005006292,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,4.66170502085536,6.81825310232015,3.35769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:8783471..8783495,- | |||
}} |
Latest revision as of 03:36, 4 August 2015
Short description: | p@chr16:8783471..8783495, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:8783471..8783495, - |
Coexpression cluster: | MCL_coexpression_mm9:725 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.12e-25 | 3 |
trophoblast cell | 2.12e-25 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 2.12e-25 | 3 |
blastula | 2.12e-25 | 3 |
cleaving embryo | 2.12e-25 | 3 |
testis | 2.56e-14 | 14 |
male reproductive organ | 2.27e-13 | 15 |
male organism | 1.54e-12 | 16 |
male reproductive system | 1.54e-12 | 16 |
external genitalia | 8.32e-12 | 17 |
indifferent external genitalia | 8.32e-12 | 17 |
indifferent gonad | 8.32e-12 | 17 |
reproductive organ | 9.55e-12 | 24 |
extraembryonic membrane | 2.23e-11 | 3 |
extraembryonic structure | 2.23e-11 | 3 |
membranous layer | 2.23e-11 | 3 |
gonad | 3.74e-11 | 18 |
gonad primordium | 3.74e-11 | 18 |
reproductive structure | 7.88e-11 | 26 |
reproductive system | 7.88e-11 | 26 |
amnion | 3.04e-09 | 1 |