FFCP PHASE1:Mm9::chr16:91648104..91648150,+: Difference between revisions
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{{FFCP|EntrezGene=20658|HGNC=|MCL_coexpression_id=540|UniProt=Q9QX47|association_with_transcript=0bp_to_ENSMUST00000023683,ENSMUST00000114036,ENSMUST00000114037,ENSMUST00000119368,ENSMUST00000122302,ENSMUST00000140312_5end|description=CAGE_peak_1_at_Son_5end|id=chr16:91648104..91648150,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!1.11e-08!147;UBERON:0001004!1.31e-08!42;UBERON:0000065!2.28e-08!41;UBERON:0004177!8.24e-08!29;UBERON:0003408!5.17e-07!24;UBERON:0002370!8.82e-07!23;UBERON:0000974!8.82e-07!23;UBERON:0004807!8.82e-07!23;UBERON:0005058!8.82e-07!23;UBERON:0003351!8.82e-07!23;UBERON:0009113!8.82e-07!23;UBERON:0003295!8.82e-07!23;UBERON:0009722!8.82e-07!23;UBERON:0005562!8.82e-07!23;UBERON:0007690!8.82e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.31e-08,42;UBERON:0000153,1.36e-08,43;UBERON:0001048,1.36e-08,134;UBERON:0000065,2.28e-08,41;UBERON:0007811,4.03e-08,36;UBERON:0004177,8.24e-08,29;UBERON:0005057,8.24e-08,29;UBERON:0000077,4.45e-07,35;UBERON:0003408,5.17e-07,24;UBERON:0002370,8.82e-07,23;UBERON:0000974,8.82e-07,23;UBERON:0004807,8.82e-07,23;UBERON:0005058,8.82e-07,23;UBERON:0003351,8.82e-07,23;UBERON:0009113,8.82e-07,23;UBERON:0003295,8.82e-07,23;UBERON:0009722,8.82e-07,23;UBERON:0005562,8.82e-07,23;UBERON:0007690,8.82e-07,23|phase1_expression=208.353650083337,146.220695800892,120.119799198838,228.360479536657,171.306339641651,121.880351408032,131.991141936472,275.807418871207,404.767576186042,367.247241799208,233.370090691363,209.88055031673,366.198361322849,272.751655547272,110.5924409228,200.045564181148,182.585650191446,319.563173507895,355.811955206892,235.536256747907,203.848766492114,147.447062533315,154.63027517025,166.872096973523,114.475231252518,87.8574905095981,96.9214491357918,112.045040996662,108.883419348502,115.681829559808,86.2531686449135,51.4374845502301,38.7490816178279,0,98.2095507154334,65.3302156258875,90.6511941804919,357.007481018582,194.552500786426,383.21938058882,438.820690071137,448.07783813274,359.763171596085,97.9477243849991,91.1378611663436,93.2417500981342,28.1660883965294,29.4333961113603,24.1654801007919,57.5512501259879,36.8164288874703,23.0004102983955,359.893689993844,261.855733266095,305.173169621357,107.019925390954,124.068979493482,121.182941685199,131.303383097879,146.530501258353,77.3274312277539,26.7687180334614,30.2360230677787,26.5470416598013,26.6993917893083,16.3410426437603,18.8748069626595,31.1216827310459,153.564315828855,107.464726912026,119.254253086234,61.4149616468178,67.5857735311937,137.679658317608,144.5349702955,76.2951592886317,104.610086949419,178.762273319263,172.807349913274,126.610836220986,161.109740383843,202.63530114658,104.972807624519,113.678047226399,143.171958166871,124.333263069888,182.378123103651,161.981118422186,148.726243706373,174.041302925927,367.838036162429,104.111289114748,73.4369040404371,97.6862776864449,118.909084392923,142.92057698405,128.506644420553,111.972721933784,67.5443611967459,74.9079897961921,196.335727168693,260.502749151065,751.675457134605,319.980016418999,95.9055311679679,96.5301087460126,87.9612534325723,166.251728870951,566.556089420012,193.865433618661,130.460965728134,133.355879500718,130.297755949673,149.516859428202,231.532164350203,128.933922704247,176.250011994609,260.712640526601,239.729459578416,203.340930383893,193.898853208226,256.499008908533,141.657738525773,308.590960050171,328.621882990311,153.529690180363,236.874501148204,98.9839506139123,201.533380137881,178.250860891739,228.750301409313,171.643844986173,225.450143289383,212.243829584174,189.710484682878,209.777953146611,173.94163345634,192.830804445644,168.060634358394,271.890877805324,204.809577223296,121.15840903644,201.489523252186,244.593919347366,272.962434595127,308.754065886488,198.272849168386,339.418822409589,172.238826353341,218.039310433496,228.208608040642,167.465539574667,281.105768967079,209.996056412866,238.089931823991,197.840061217582,135.527145151454,166.761443810335,134.12517171472,168.186127298828,190.669686764631,171.959268695269,199.339067362747,222.540346106314,237.879888072337,223.930188794643,192.083755402127,239.952778564533,231.371148978354,287.785564530654,273.607232217263,213.890581603261,216.037313446394,213.11979299147,243.936340334388,229.271476381046,203.53797031802,158.405889431463,221.179915805038,202.278141190442,175.130879936725,182.725273308748,180.34859355819,136.77222517493,156.120061248144,145.264478066578,182.469361588996,202.935601481974,196.523799816073,202.2343669472,210.734598627827,211.488032196138,120.059781303301,196.850187226563,233.305012843276,218.721526105867,206.559398833521,239.093010006096,203.93783222573,255.217945856732,210.535294035284,148.816979689691,146.151145153964,172.350994204725,164.126760919525,186.185829054659,198.397198717956,137.953335378382,125.021293224677,186.427097068125,228.93494020635,143.595619097367,280.34800272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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20658 | |||
|HGNC= | |||
|MCL_coexpression_id=540 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QX47 | |||
|association_with_transcript=0bp_to_ENSMUST00000023683,ENSMUST00000114036,ENSMUST00000114037,ENSMUST00000119368,ENSMUST00000122302,ENSMUST00000140312_5end | |||
|cluster_id=chr16:91648104..91648150,+ | |||
|description=CAGE_peak_1_at_Son_5end | |||
|id=chr16:91648104..91648150,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.11e-08!147;UBERON:0001004!1.31e-08!42;UBERON:0000065!2.28e-08!41;UBERON:0004177!8.24e-08!29;UBERON:0003408!5.17e-07!24;UBERON:0002370!8.82e-07!23;UBERON:0000974!8.82e-07!23;UBERON:0004807!8.82e-07!23;UBERON:0005058!8.82e-07!23;UBERON:0003351!8.82e-07!23;UBERON:0009113!8.82e-07!23;UBERON:0003295!8.82e-07!23;UBERON:0009722!8.82e-07!23;UBERON:0005562!8.82e-07!23;UBERON:0007690!8.82e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.31e-08,42;UBERON:0000153,1.36e-08,43;UBERON:0001048,1.36e-08,134;UBERON:0000065,2.28e-08,41;UBERON:0007811,4.03e-08,36;UBERON:0004177,8.24e-08,29;UBERON:0005057,8.24e-08,29;UBERON:0000077,4.45e-07,35;UBERON:0003408,5.17e-07,24;UBERON:0002370,8.82e-07,23;UBERON:0000974,8.82e-07,23;UBERON:0004807,8.82e-07,23;UBERON:0005058,8.82e-07,23;UBERON:0003351,8.82e-07,23;UBERON:0009113,8.82e-07,23;UBERON:0003295,8.82e-07,23;UBERON:0009722,8.82e-07,23;UBERON:0005562,8.82e-07,23;UBERON:0007690,8.82e-07,23 | |||
|phase1_expression=208.353650083337,146.220695800892,120.119799198838,228.360479536657,171.306339641651,121.880351408032,131.991141936472,275.807418871207,404.767576186042,367.247241799208,233.370090691363,209.88055031673,366.198361322849,272.751655547272,110.5924409228,200.045564181148,182.585650191446,319.563173507895,355.811955206892,235.536256747907,203.848766492114,147.447062533315,154.63027517025,166.872096973523,114.475231252518,87.8574905095981,96.9214491357918,112.045040996662,108.883419348502,115.681829559808,86.2531686449135,51.4374845502301,38.7490816178279,0,98.2095507154334,65.3302156258875,90.6511941804919,357.007481018582,194.552500786426,383.21938058882,438.820690071137,448.07783813274,359.763171596085,97.9477243849991,91.1378611663436,93.2417500981342,28.1660883965294,29.4333961113603,24.1654801007919,57.5512501259879,36.8164288874703,23.0004102983955,359.893689993844,261.855733266095,305.173169621357,107.019925390954,124.068979493482,121.182941685199,131.303383097879,146.530501258353,77.3274312277539,26.7687180334614,30.2360230677787,26.5470416598013,26.6993917893083,16.3410426437603,18.8748069626595,31.1216827310459,153.564315828855,107.464726912026,119.254253086234,61.4149616468178,67.5857735311937,137.679658317608,144.5349702955,76.2951592886317,104.610086949419,178.762273319263,172.807349913274,126.610836220986,161.109740383843,202.63530114658,104.972807624519,113.678047226399,143.171958166871,124.333263069888,182.378123103651,161.981118422186,148.726243706373,174.041302925927,367.838036162429,104.111289114748,73.4369040404371,97.6862776864449,118.909084392923,142.92057698405,128.506644420553,111.972721933784,67.5443611967459,74.9079897961921,196.335727168693,260.502749151065,751.675457134605,319.980016418999,95.9055311679679,96.5301087460126,87.9612534325723,166.251728870951,566.556089420012,193.865433618661,130.460965728134,133.355879500718,130.297755949673,149.516859428202,231.532164350203,128.933922704247,176.250011994609,260.712640526601,239.729459578416,203.340930383893,193.898853208226,256.499008908533,141.657738525773,308.590960050171,328.621882990311,153.529690180363,236.874501148204,98.9839506139123,201.533380137881,178.250860891739,228.750301409313,171.643844986173,225.450143289383,212.243829584174,189.710484682878,209.777953146611,173.94163345634,192.830804445644,168.060634358394,271.890877805324,204.809577223296,121.15840903644,201.489523252186,244.593919347366,272.962434595127,308.754065886488,198.272849168386,339.418822409589,172.238826353341,218.039310433496,228.208608040642,167.465539574667,281.105768967079,209.996056412866,238.089931823991,197.840061217582,135.527145151454,166.761443810335,134.12517171472,168.186127298828,190.669686764631,171.959268695269,199.339067362747,222.540346106314,237.879888072337,223.930188794643,192.083755402127,239.952778564533,231.371148978354,287.785564530654,273.607232217263,213.890581603261,216.037313446394,213.11979299147,243.936340334388,229.271476381046,203.53797031802,158.405889431463,221.179915805038,202.278141190442,175.130879936725,182.725273308748,180.34859355819,136.77222517493,156.120061248144,145.264478066578,182.469361588996,202.935601481974,196.523799816073,202.2343669472,210.734598627827,211.488032196138,120.059781303301,196.850187226563,233.305012843276,218.721526105867,206.559398833521,239.093010006096,203.93783222573,255.217945856732,210.535294035284,148.816979689691,146.151145153964,172.350994204725,164.126760919525,186.185829054659,198.397198717956,137.953335378382,125.021293224677,186.427097068125,228.93494020635,143.595619097367,280.348002728341,202.072534583997,196.271696389059,159.629850862575,154.999365282932,171.267450083995,262.719036416912,133.591445298192,217.721208526547,226.100454252551,210.986533211363,240.873998201331,246.375168317024,256.015345989432,350.265290203956,331.532640404216,317.474444397057,336.575248426126,308.242692630624,304.052321138337,224.679013069516,168.6107619838,166.216324280434,192.051975428094,171.62858069695,193.164859503951,80.9838630160777,213.337933487695,107.90381104036,128.063908129297,136.147587367129,129.282119692331,153.731085116852,171.261301127244,133.18272085104,136.483485644583,145.861190062267,245.168164429839,202.122681336575,134.795661976112,179.175655288934,219.740203799417,240.268700395333,153.922923322258,137.557218418962,176.722959731277,129.046927188898,166.014979889721,194.079648169334,183.948067115618,200.351526652213,239.555862515349,220.324891921747,185.643977846736,227.073217037777,193.925798271721,104.909892547814,153.679654117652,206.778712426891,189.784421928603,165.371765705132,119.350260052923,168.25961468168,141.080159195304,206.855637375554,508.0145453127,267.223626181724,262.30091051255,191.83135681304,242.928531622691,216.861742452609,177.637439326068,233.409623169867,197.099458904877,218.34434776889,233.953623599826,311.936227659379,208.645693964349,318.029642518503,300.475768138894,285.382945906135,74.4643082051789,157.377156806615,190.510340697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| |||
|short_description=p1@Son | |||
}} |
Revision as of 04:57, 4 August 2015
Short description: | p1@Son |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Son_5end |
Coexpression cluster: | MCL_coexpression_mm9:540 |
Association with transcript: | 0bp_to_ENSMUST00000023683, ENSMUST00000114036, ENSMUST00000114037, ENSMUST00000119368, ENSMUST00000122302, ENSMUST00000140312_5end |
EntrezGene: | 20658 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.31e-08 | 42 |
anterior region of body | 1.36e-08 | 43 |
primordium | 1.36e-08 | 134 |
respiratory tract | 2.28e-08 | 41 |
craniocervical region | 4.03e-08 | 36 |
hemopoietic organ | 8.24e-08 | 29 |
immune organ | 8.24e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 4.45e-07 | 35 |
gland of gut | 5.17e-07 | 24 |
thymus | 8.82e-07 | 23 |
neck | 8.82e-07 | 23 |
respiratory system epithelium | 8.82e-07 | 23 |
hemolymphoid system gland | 8.82e-07 | 23 |
pharyngeal epithelium | 8.82e-07 | 23 |
thymic region | 8.82e-07 | 23 |
pharyngeal gland | 8.82e-07 | 23 |
entire pharyngeal arch endoderm | 8.82e-07 | 23 |
thymus primordium | 8.82e-07 | 23 |
early pharyngeal endoderm | 8.82e-07 | 23 |