FFCP PHASE1:Mm9::chr3:89884407..89884420,+: Difference between revisions
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{{FFCP|EntrezGene=59069|HGNC=|MCL_coexpression_id=384|UniProt=|association_with_transcript=43bp_to_ENSMUST00000127955_5end|description=CAGE_peak_5_at_Tpm3_5end|id=chr3:89884407..89884420,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002320,4.28e-08,46;CL:0000134,4.28e-08,46;CL:0000034,5.17e-08,97;CL:0000988,7.21e-08,32;CL:0002032,7.21e-08,32;CL:0000037,7.21e-08,32;CL:0000837,7.21e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.85e-07,3;DOID:4045,7.85e-07,3|ontology_enrichment_uberon=UBERON:0000065!9.76e-11!41;UBERON:0001004!3.15e-10!42;UBERON:0005911!2.85e-08!69;UBERON:0000072!2.34e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.28e-08,46|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0.33575854382378,0.700837921786577,1.42035655785734,0.703943610758334,0.936258105287974,0,0.478632953972018,0.171200729931206,0.437102012094987,0,0,0,0,0.274228867211478,0,0.0850432901510698,1.58865521921416,3.13439746966722,0.159992422793407,0.91763712426868,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0.866554859253824,0,0.204169356262369,2.92972141515835,0.7813353445238,1.57057123192139,3.52938892818609,3.41522742479223,0.971020706062307,0.377690453926732,0,0.734187008646726,0,0,0,0.58328969722285,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0.170430322578058,0,0,0,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,2.51611761462433,0.599902730993408,1.90605340609597,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,4.21327912387941,1.28673953557358,1.98914449576915,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0.274561413188081,0,1.11642284300551,0,0,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0.714130922658041,0.780534591431195,0.157635144106191,0.221464689648775,0.478364305972461,0,0.518054945597687,0.867894351489069,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,5.43930975980337,5.17820373597535,4.42239916174156,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0.821500670520278,0,0.104859344425711,0,0,0,0.405450430580328,0.513554785824136,0.389762468933385,0.537080087002444,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0.457240839929999,0.302478555410522,0,0.0962118416403295,0.818138315270983,0,0.665957860122194,0.358855426437903,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p5@Tpm3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:59069 | |||
|HGNC= | |||
|MCL_coexpression_id=384 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=43bp_to_ENSMUST00000127955_5end | |||
|cluster_id=chr3:89884407..89884420,+ | |||
|description=CAGE_peak_5_at_Tpm3_5end | |||
|id=chr3:89884407..89884420,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.28e-08,46;CL:0000134,4.28e-08,46;CL:0000034,5.17e-08,97;CL:0000988,7.21e-08,32;CL:0002032,7.21e-08,32;CL:0000037,7.21e-08,32;CL:0000837,7.21e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.85e-07,3;DOID:4045,7.85e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000065!9.76e-11!41;UBERON:0001004!3.15e-10!42;UBERON:0005911!2.85e-08!69;UBERON:0000072!2.34e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.28e-08,46 | |||
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0.33575854382378,0.700837921786577,1.42035655785734,0.703943610758334,0.936258105287974,0,0.478632953972018,0.171200729931206,0.437102012094987,0,0,0,0,0.274228867211478,0,0.0850432901510698,1.58865521921416,3.13439746966722,0.159992422793407,0.91763712426868,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0.866554859253824,0,0.204169356262369,2.92972141515835,0.7813353445238,1.57057123192139,3.52938892818609,3.41522742479223,0.971020706062307,0.377690453926732,0,0.734187008646726,0,0,0,0.58328969722285,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0.170430322578058,0,0,0,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,2.51611761462433,0.599902730993408,1.90605340609597,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,4.21327912387941,1.28673953557358,1.98914449576915,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0.274561413188081,0,1.11642284300551,0,0,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0.714130922658041,0.780534591431195,0.157635144106191,0.221464689648775,0.478364305972461,0,0.518054945597687,0.867894351489069,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,5.43930975980337,5.17820373597535,4.42239916174156,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0.821500670520278,0,0.104859344425711,0,0,0,0.405450430580328,0.513554785824136,0.389762468933385,0.537080087002444,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0.457240839929999,0.302478555410522,0,0.0962118416403295,0.818138315270983,0,0.665957860122194,0.358855426437903,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p5@Tpm3 | |||
}} |
Revision as of 05:31, 4 August 2015
Short description: | p5@Tpm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tpm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:384 |
Association with transcript: | 43bp_to_ENSMUST00000127955_5end |
EntrezGene: | 59069 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.28e-08 | 46 |
mesenchymal cell | 4.28e-08 | 46 |
stem cell | 5.17e-08 | 97 |
hematopoietic cell | 7.21e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.21e-08 | 32 |
hematopoietic stem cell | 7.21e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.21e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.28e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.85e-07 | 3 |
muscle cancer | 7.85e-07 | 3 |