FFCP PHASE1:Mm9::chr8:87125362..87125376,+: Difference between revisions
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{{FFCP|EntrezGene=12286|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000144879_5end|description=CAGE_peak_4_at_Cacna1a_5end|id=chr8:87125362..87125376,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!6.23e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000161,3.51e-09,5;UBERON:0000014,1.30e-08,5;UBERON:0001003,1.30e-08,5;UBERON:0002097,1.30e-08,5;UBERON:0002199,1.30e-08,5;UBERON:0007029,1.30e-08,5;UBERON:0007376,1.30e-08,5;UBERON:0002416,1.30e-08,5;UBERON:0007383,1.30e-08,5;UBERON:0003100,6.87e-08,11;UBERON:0007100,7.18e-08,18;UBERON:0000948,7.18e-08,18;UBERON:0005498,7.18e-08,18;UBERON:0004140,7.18e-08,18;UBERON:0009881,7.18e-08,18;UBERON:0004141,7.18e-08,18;UBERON:0003084,7.18e-08,18;UBERON:0007005,7.18e-08,18;UBERON:0004139,7.18e-08,18;UBERON:0004291,7.18e-08,18;UBERON:0007023,8.98e-08,51;UBERON:0004535,3.76e-07,23;UBERON:0001009,3.76e-07,23|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0,0,0.903863264091034,5.20918271961167,0,7.19115466547121,0.638177271962691,4.96482116800497,0.786783621770977,0.666219523631325,0.202475267389826,0,1.26184866143295,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,3.02484419228218,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0.649473123033642,0,1.01104889002957,0.34255163915718,4.66088190564909,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0.988779870937496,4.19338135067744,0,0.161766849947409,0,0.969750506270444,0,0,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0,0.324482526135515,0.509196819251581,0.622034853050465,2.27450482590307,1.47309299120532,0.650602214813519,0.689706313300419,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.281105173679186,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.61734640922383,0.59710280045548,0,0,0,2.27838349789052,1.17263029990548,1.08037236876609,2.84093682702252,3.14822770795846,3.08534225774756,1.86027155800326,1.3413670069981,1.05088808130453,0.329119699826961,0.492502392237286,0.648550476366846,0.438599962275997,1.75640092232841,0.402619256281115,0,0.102904612379284,0.330418782983798,0,1.06644125267617,1.39342003116263,1.28867461322093,0.605050573870028,0.444756087689741,0.760902504450237,0,0.164698954724011,0.754005626400808,0.795825888164603,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.442655759869801,1.03327103585722,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.896987067609561,0,0.184753190166605,0.757965647081939,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0.578596234326046,0,0,7.86822836830458,4.41498794087572,0.80275294993896,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,2.49291845134157,0.651547837414304,1.97964147567043,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,11.234506989875,0.900305470156551,0.646793418913773,1.28602221018955,1.77340233642274,1.07021290561242,0.822745103010605,0.608929898229199,0.704015124191131,3.1774810629573,2.64634077665954,1.97863503529776,1.61464426695906,1.32688434841943,1.3130957840345,2.1338316966858,0,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0.686334519619568,0.679913719975421,0.839708713941948,0.138199973804424,0,1.26534397432454,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.129614973291793,1.86401793926078,0,0.747582730219894,0,0.583353565032143,0.129159823477731,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0,0,1.26404448251271,0.405450430580328,0.924398614483445,1.42912905275575,1.25318686967237,0.198681354781265,0.961563596159751,0.295379054349154,0.807731599585181,0.381034033274999,0.403304740547362,1.26695244961678,0.962118416403295,0.818138315270983,11.789979947991,0,0,0.167884616364078,1.15913756419314,2.25218970541418,0.915758121336325,1.71494703263253,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0.581385666529314,0.188218760830661,0.338458431566706,0.365855945745545,0.7892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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12286 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000144879_5end | |||
|cluster_id=chr8:87125362..87125376,+ | |||
|description=CAGE_peak_4_at_Cacna1a_5end | |||
|id=chr8:87125362..87125376,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!6.23e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,3.51e-09,5;UBERON:0000014,1.30e-08,5;UBERON:0001003,1.30e-08,5;UBERON:0002097,1.30e-08,5;UBERON:0002199,1.30e-08,5;UBERON:0007029,1.30e-08,5;UBERON:0007376,1.30e-08,5;UBERON:0002416,1.30e-08,5;UBERON:0007383,1.30e-08,5;UBERON:0003100,6.87e-08,11;UBERON:0007100,7.18e-08,18;UBERON:0000948,7.18e-08,18;UBERON:0005498,7.18e-08,18;UBERON:0004140,7.18e-08,18;UBERON:0009881,7.18e-08,18;UBERON:0004141,7.18e-08,18;UBERON:0003084,7.18e-08,18;UBERON:0007005,7.18e-08,18;UBERON:0004139,7.18e-08,18;UBERON:0004291,7.18e-08,18;UBERON:0007023,8.98e-08,51;UBERON:0004535,3.76e-07,23;UBERON:0001009,3.76e-07,23 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0,0,0.903863264091034,5.20918271961167,0,7.19115466547121,0.638177271962691,4.96482116800497,0.786783621770977,0.666219523631325,0.202475267389826,0,1.26184866143295,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,3.02484419228218,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0.649473123033642,0,1.01104889002957,0.34255163915718,4.66088190564909,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0.988779870937496,4.19338135067744,0,0.161766849947409,0,0.969750506270444,0,0,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0,0.324482526135515,0.509196819251581,0.622034853050465,2.27450482590307,1.47309299120532,0.650602214813519,0.689706313300419,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.281105173679186,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.61734640922383,0.59710280045548,0,0,0,2.27838349789052,1.17263029990548,1.08037236876609,2.84093682702252,3.14822770795846,3.08534225774756,1.86027155800326,1.3413670069981,1.05088808130453,0.329119699826961,0.492502392237286,0.648550476366846,0.438599962275997,1.75640092232841,0.402619256281115,0,0.102904612379284,0.330418782983798,0,1.06644125267617,1.39342003116263,1.28867461322093,0.605050573870028,0.444756087689741,0.760902504450237,0,0.164698954724011,0.754005626400808,0.795825888164603,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.442655759869801,1.03327103585722,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.896987067609561,0,0.184753190166605,0.757965647081939,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0.578596234326046,0,0,7.86822836830458,4.41498794087572,0.80275294993896,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,2.49291845134157,0.651547837414304,1.97964147567043,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,11.234506989875,0.900305470156551,0.646793418913773,1.28602221018955,1.77340233642274,1.07021290561242,0.822745103010605,0.608929898229199,0.704015124191131,3.1774810629573,2.64634077665954,1.97863503529776,1.61464426695906,1.32688434841943,1.3130957840345,2.1338316966858,0,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0.686334519619568,0.679913719975421,0.839708713941948,0.138199973804424,0,1.26534397432454,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.129614973291793,1.86401793926078,0,0.747582730219894,0,0.583353565032143,0.129159823477731,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0,0,1.26404448251271,0.405450430580328,0.924398614483445,1.42912905275575,1.25318686967237,0.198681354781265,0.961563596159751,0.295379054349154,0.807731599585181,0.381034033274999,0.403304740547362,1.26695244961678,0.962118416403295,0.818138315270983,11.789979947991,0,0,0.167884616364078,1.15913756419314,2.25218970541418,0.915758121336325,1.71494703263253,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0.581385666529314,0.188218760830661,0.338458431566706,0.365855945745545,0.789209134313529,0.679020569229309,0,0.711810108745045,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0.463735671240843 | |||
|short_description=p4@Cacna1a | |||
}} |
Revision as of 05:44, 4 August 2015
Short description: | p4@Cacna1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cacna1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000144879_5end |
EntrezGene: | 12286 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
orifice | 3.51e-09 | 5 |
zone of skin | 1.30e-08 | 5 |
skin epidermis | 1.30e-08 | 5 |
skin of body | 1.30e-08 | 5 |
integument | 1.30e-08 | 5 |
surface | 1.30e-08 | 5 |
outer epithelium | 1.30e-08 | 5 |
integumental system | 1.30e-08 | 5 |
enveloping layer of ectoderm | 1.30e-08 | 5 |
female organism | 6.87e-08 | 11 |
primary circulatory organ | 7.18e-08 | 18 |
heart | 7.18e-08 | 18 |
primitive heart tube | 7.18e-08 | 18 |
primary heart field | 7.18e-08 | 18 |
anterior lateral plate mesoderm | 7.18e-08 | 18 |
heart tube | 7.18e-08 | 18 |
heart primordium | 7.18e-08 | 18 |
cardiac mesoderm | 7.18e-08 | 18 |
cardiogenic plate | 7.18e-08 | 18 |
heart rudiment | 7.18e-08 | 18 |
adult organism | 8.98e-08 | 51 |
cardiovascular system | 3.76e-07 | 23 |
circulatory system | 3.76e-07 | 23 |