FFCP PHASE1:Mm9::chr11:86393934..86393939,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:86393934..86393939,-|id=chr11:86393934..86393939,-|ontology_enrichment_celltype=CL:0000066!1.58e-15!25;CL:0000223!6.49e-13!20;CL:0002563!2.04e-12!9;CL:0002251!2.04e-12!9;CL:0000075!7.02e-09!7;CL:0000239!1.91e-08!6;CL:0000677!1.91e-08!6;CL:0000212!1.91e-08!6;CL:0000584!1.91e-08!6;CL:0002076!7.47e-08!15;CL:0000181!4.19e-07!5;CL:0000417!4.19e-07!5;CL:0000668!4.19e-07!5;CL:0000412!4.19e-07!5;CL:0000182!4.19e-07!5|ontology_enrichment_celltype_v019_2=CL:0002563,9.17e-28,9;CL:0002251,9.17e-28,9;CL:0000223,1.43e-24,20;CL:0000066,1.79e-22,25;CL:0000239,3.67e-18,6;CL:0000677,3.67e-18,6;CL:0000584,3.67e-18,6;CL:0002076,4.87e-16,15;CL:0000075,1.73e-15,7;CL:0002250,3.39e-11,3;CL:0000182,2.87e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.54e-18!15;UBERON:0001242!9.79e-17!13;UBERON:0000060!9.79e-17!13;UBERON:0001262!9.79e-17!13;UBERON:0004786!9.79e-17!13;UBERON:0003350!2.04e-12!9;UBERON:0004808!2.04e-12!9;UBERON:0001277!2.04e-12!9;UBERON:0000485!2.14e-11!11;UBERON:0004923!2.66e-11!24;UBERON:0001007!7.62e-09!128;UBERON:0001555!7.62e-09!128;UBERON:0007026!7.62e-09!128;UBERON:0004119!1.63e-08!130;UBERON:0000925!1.63e-08!130;UBERON:0006595!1.63e-08!130;UBERON:0005409!2.97e-08!59;UBERON:0000160!4.98e-08!43;UBERON:0000490!5.05e-08!66;UBERON:0004921!7.30e-08!126;UBERON:0004185!7.30e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.67e-33,13;UBERON:0001262,2.67e-33,13;UBERON:0004786,2.67e-33,13;UBERON:0000344,1.52e-28,15;UBERON:0003350,9.17e-28,9;UBERON:0004808,9.17e-28,9;UBERON:0001277,9.17e-28,9;UBERON:0000485,1.95e-22,11;UBERON:0004923,6.90e-20,24;UBERON:0000160,2.73e-17,31;UBERON:0005409,1.98e-10,47;UBERON:0000490,2.28e-10,66;UBERON:0003929,6.33e-10,55;UBERON:0005911,2.69e-07,69;UBERON:0004921,5.35e-07,114;UBERON:0001007,8.30e-07,116;UBERON:0001555,8.30e-07,116;UBERON:0007026,8.30e-07,116|phase1_expression=0,1.74487703819681,1.36499771816861,2.72217790176147,4.00716583957078,2.68606835059024,1.16806320297763,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0.639969691173627,0.68822784320151,5.7423196411502,0.430761996159075,0.861884930743556,2.47030445293286,0.504060259519861,1.99557459589774,0,0,0,11.8429164098023,8.6442015586416,8.5751129630195,1.67412652294763,0.7813353445238,2.09409497589519,7.05877785637217,9.56263678941824,1.45653105909346,0.377690453926732,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,0.679971333707751,4.31762553310254,3.24888208723835,1.79210754838934,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0,1.02765491747154,0,0,0,0,0,0,0.117588707135705,0,1.48316980640624,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,0.505157755894224,0.896987067609561,1.4473305640901,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0,0.144649058581512,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0|short_description=p@chr11:86393934..86393939,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:86393934..86393939,- | |||
|description=CAGE_peak_at_chr11:86393934..86393939,- | |||
|id=chr11:86393934..86393939,- | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-15!25;CL:0000223!6.49e-13!20;CL:0002563!2.04e-12!9;CL:0002251!2.04e-12!9;CL:0000075!7.02e-09!7;CL:0000239!1.91e-08!6;CL:0000677!1.91e-08!6;CL:0000212!1.91e-08!6;CL:0000584!1.91e-08!6;CL:0002076!7.47e-08!15;CL:0000181!4.19e-07!5;CL:0000417!4.19e-07!5;CL:0000668!4.19e-07!5;CL:0000412!4.19e-07!5;CL:0000182!4.19e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.17e-28,9;CL:0002251,9.17e-28,9;CL:0000223,1.43e-24,20;CL:0000066,1.79e-22,25;CL:0000239,3.67e-18,6;CL:0000677,3.67e-18,6;CL:0000584,3.67e-18,6;CL:0002076,4.87e-16,15;CL:0000075,1.73e-15,7;CL:0002250,3.39e-11,3;CL:0000182,2.87e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.54e-18!15;UBERON:0001242!9.79e-17!13;UBERON:0000060!9.79e-17!13;UBERON:0001262!9.79e-17!13;UBERON:0004786!9.79e-17!13;UBERON:0003350!2.04e-12!9;UBERON:0004808!2.04e-12!9;UBERON:0001277!2.04e-12!9;UBERON:0000485!2.14e-11!11;UBERON:0004923!2.66e-11!24;UBERON:0001007!7.62e-09!128;UBERON:0001555!7.62e-09!128;UBERON:0007026!7.62e-09!128;UBERON:0004119!1.63e-08!130;UBERON:0000925!1.63e-08!130;UBERON:0006595!1.63e-08!130;UBERON:0005409!2.97e-08!59;UBERON:0000160!4.98e-08!43;UBERON:0000490!5.05e-08!66;UBERON:0004921!7.30e-08!126;UBERON:0004185!7.30e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.67e-33,13;UBERON:0001262,2.67e-33,13;UBERON:0004786,2.67e-33,13;UBERON:0000344,1.52e-28,15;UBERON:0003350,9.17e-28,9;UBERON:0004808,9.17e-28,9;UBERON:0001277,9.17e-28,9;UBERON:0000485,1.95e-22,11;UBERON:0004923,6.90e-20,24;UBERON:0000160,2.73e-17,31;UBERON:0005409,1.98e-10,47;UBERON:0000490,2.28e-10,66;UBERON:0003929,6.33e-10,55;UBERON:0005911,2.69e-07,69;UBERON:0004921,5.35e-07,114;UBERON:0001007,8.30e-07,116;UBERON:0001555,8.30e-07,116;UBERON:0007026,8.30e-07,116 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,2.72217790176147,4.00716583957078,2.68606835059024,1.16806320297763,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0.639969691173627,0.68822784320151,5.7423196411502,0.430761996159075,0.861884930743556,2.47030445293286,0.504060259519861,1.99557459589774,0,0,0,11.8429164098023,8.6442015586416,8.5751129630195,1.67412652294763,0.7813353445238,2.09409497589519,7.05877785637217,9.56263678941824,1.45653105909346,0.377690453926732,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,0.679971333707751,4.31762553310254,3.24888208723835,1.79210754838934,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0,1.02765491747154,0,0,0,0,0,0,0.117588707135705,0,1.48316980640624,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,0.505157755894224,0.896987067609561,1.4473305640901,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0,0.144649058581512,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr11:86393934..86393939,- | |||
}} |
Latest revision as of 06:08, 4 August 2015
Short description: | p@chr11:86393934..86393939, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86393934..86393939, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.17e-28 | 9 |
epithelial cell of alimentary canal | 9.17e-28 | 9 |
endodermal cell | 1.43e-24 | 20 |
epithelial cell | 1.79e-22 | 25 |
brush border epithelial cell | 3.67e-18 | 6 |
gut absorptive cell | 3.67e-18 | 6 |
enterocyte | 3.67e-18 | 6 |
endo-epithelial cell | 4.87e-16 | 15 |
columnar/cuboidal epithelial cell | 1.73e-15 | 7 |
intestinal crypt stem cell | 3.39e-11 | 3 |
hepatocyte | 2.87e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.67e-33 | 13 |
wall of intestine | 2.67e-33 | 13 |
gastrointestinal system mucosa | 2.67e-33 | 13 |
mucosa | 1.52e-28 | 15 |
epithelium of mucosa | 9.17e-28 | 9 |
gastrointestinal system epithelium | 9.17e-28 | 9 |
intestinal epithelium | 9.17e-28 | 9 |
simple columnar epithelium | 1.95e-22 | 11 |
organ component layer | 6.90e-20 | 24 |
intestine | 2.73e-17 | 31 |
gastrointestinal system | 1.98e-10 | 47 |
unilaminar epithelium | 2.28e-10 | 66 |
gut epithelium | 6.33e-10 | 55 |
endo-epithelium | 2.69e-07 | 69 |
subdivision of digestive tract | 5.35e-07 | 114 |
digestive system | 8.30e-07 | 116 |
digestive tract | 8.30e-07 | 116 |
primitive gut | 8.30e-07 | 116 |