FFCP PHASE1:Mm9::chr10:25798793..25798834,-: Difference between revisions
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{{FFCP|EntrezGene=77220|HGNC=|UniProt=B2RUN2,Q8C817|association_with_transcript=23bp_to_NM_029881,uc007erw.2_5end|description=CAGE_peak_1_at_Tmem200a_5end|id=chr10:25798793..25798834,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.34e-12!71;UBERON:0003075!7.34e-12!71;UBERON:0007284!7.34e-12!71;UBERON:0004121!7.88e-11!102;UBERON:0000924!7.88e-11!102;UBERON:0006601!7.88e-11!102;UBERON:0003056!1.08e-08!49;UBERON:0000033!5.90e-08!63;UBERON:0001017!1.67e-07!73;UBERON:0005743!1.67e-07!73;UBERON:0000073!1.74e-07!75;UBERON:0001016!1.74e-07!75;UBERON:0000468!2.45e-07!333;UBERON:0001049!9.16e-07!52;UBERON:0005068!9.16e-07!52;UBERON:0006241!9.16e-07!52;UBERON:0007135!9.16e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.80e-08,49;UBERON:0002346,3.82e-07,64;UBERON:0003075,3.82e-07,64;UBERON:0007284,3.82e-07,64|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,1.56478268869608,0.65407546914134,0.878744730937887,1.55543919259427,1.1198913730029,0,0,0,0,1.02903774414379,0,0,5.46254444320914,4.7609188134483,5.70448263155561,1.35537812827653,0.889294796111139,0,0,0,1.19840044207362,0,1.55534418462716,2.02508907497536,1.68259969081106,2.28520787523043,0.441737081903227,3.67472397644862,4.69642807989358,0.919218786610021,0,0.766124028511126,0.614426133024974,8.70449499019279,9.33173964744578,9.89735404057844,0,0.56276261003168,1.5279824777681,1.76777151284201,2.56269025438385,4.28718725398191,0.908714319998209,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,4.08445917352373,0,0,0,0,0,0,0,0,11.2816025689267,1.90833859442749,1.52232739156071,2.7673859670727,3.01445281105245,2.93971767839262,5.27799683584637,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,2.39665023047716,0.915001205637253,9.04711335212624,1.21677024134594,1.79000820131231,0.41557608911912,0.811206315338788,1.01839363850316,0.373220911830279,0,1.05220927943237,1.82168620147785,3.67843367093557,4.86167750474443,1.80845781402858,2.31324097114515,2.17793324484245,1.78033276663485,0.776110112217047,0.646703978798527,1.70195472151037,2.99116911078713,2.19195732427575,1.11218899690239,0.696504333044333,0.823128545631774,2.38841120182192,0,0,0,0.207125772535502,0,0.900310307305074,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0,1.68231958851302,5.55684906848136,0,0.264450566663544,4.26576501070468,6.50262681209228,2.57734922644187,1.4117846723634,0.889512175379481,0.760902504450237,0,0.988193728344065,0.754005626400808,1.59165177632921,0.779856348476481,0.898819408654221,0,0.398282546508734,0.379335801906163,1.25673363870702,1.1270773567308,0.814605311381257,0.969762435838129,1.68325967736765,0.822074982615345,0.147610147979602,0.784993639206874,0,0,0.667380422864376,0.786235980452812,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,1.70542270593436,1.79261474086228,1.52770577197669,1.17345124144251,1.17254380209271,0.952174563544055,1.17080188714679,2.04925687338048,3.98636441367795,5.42146213435456,3.27726629431476,2.76295970985433,1.3018415272336,0,0,0,0.275936746304732,0.321101179975584,0.468846746368813,1.14754461763673,0,0.315508219416257,0.390438744296638,1.07711698866399,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,1.60660658210904,1.84522110770749,2.13678724400706,1.14020871547503,3.29940245945071,0,3.8844901784797,2.11626489875326,1.69744571780308,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,1.8006109403131,1.03486947026204,2.7863814554107,2.48276327099183,4.10248280484762,3.78462747384878,1.8267896946876,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0.874442509889552,0.18542530201051,0.683483523191411,6.81076664278634,1.11116716421827,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,6.95939185878498,8.3360981522008,5.18425635944646,4.18176592028937,2.62035076495413,2.56242258131159,3.88471241909079,0.785267825952089,0.777689839750757,0,0,2.8408143748356,3.30916980914195,2.91676782516071,1.54991788173277,1.35164900392623,1.76035857968631,2.3436789271911,0.734015410979976,0.966336483304024,0.288030006257865,0,1.41907650703115,0.410843828659309,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,3.11357761254351,0.857473516316263,0,1.6942555278512,1.38097570952153,1.14579102687879,0.343706364687375,0,0,0,0.900642406448441,0,1.55328093525546,0.93408612825759,2.79317411380722,4.78054096111576,1.94485373654635,1.25767897576789,0.735374033800057,1.5557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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77220 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2RUN2,uniprot:Q8C817 | |||
|association_with_transcript=23bp_to_NM_029881,uc007erw.2_5end | |||
|cluster_id=chr10:25798793..25798834,- | |||
|description=CAGE_peak_1_at_Tmem200a_5end | |||
|id=chr10:25798793..25798834,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.34e-12!71;UBERON:0003075!7.34e-12!71;UBERON:0007284!7.34e-12!71;UBERON:0004121!7.88e-11!102;UBERON:0000924!7.88e-11!102;UBERON:0006601!7.88e-11!102;UBERON:0003056!1.08e-08!49;UBERON:0000033!5.90e-08!63;UBERON:0001017!1.67e-07!73;UBERON:0005743!1.67e-07!73;UBERON:0000073!1.74e-07!75;UBERON:0001016!1.74e-07!75;UBERON:0000468!2.45e-07!333;UBERON:0001049!9.16e-07!52;UBERON:0005068!9.16e-07!52;UBERON:0006241!9.16e-07!52;UBERON:0007135!9.16e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.80e-08,49;UBERON:0002346,3.82e-07,64;UBERON:0003075,3.82e-07,64;UBERON:0007284,3.82e-07,64 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,1.56478268869608,0.65407546914134,0.878744730937887,1.55543919259427,1.1198913730029,0,0,0,0,1.02903774414379,0,0,5.46254444320914,4.7609188134483,5.70448263155561,1.35537812827653,0.889294796111139,0,0,0,1.19840044207362,0,1.55534418462716,2.02508907497536,1.68259969081106,2.28520787523043,0.441737081903227,3.67472397644862,4.69642807989358,0.919218786610021,0,0.766124028511126,0.614426133024974,8.70449499019279,9.33173964744578,9.89735404057844,0,0.56276261003168,1.5279824777681,1.76777151284201,2.56269025438385,4.28718725398191,0.908714319998209,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,4.08445917352373,0,0,0,0,0,0,0,0,11.2816025689267,1.90833859442749,1.52232739156071,2.7673859670727,3.01445281105245,2.93971767839262,5.27799683584637,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,2.39665023047716,0.915001205637253,9.04711335212624,1.21677024134594,1.79000820131231,0.41557608911912,0.811206315338788,1.01839363850316,0.373220911830279,0,1.05220927943237,1.82168620147785,3.67843367093557,4.86167750474443,1.80845781402858,2.31324097114515,2.17793324484245,1.78033276663485,0.776110112217047,0.646703978798527,1.70195472151037,2.99116911078713,2.19195732427575,1.11218899690239,0.696504333044333,0.823128545631774,2.38841120182192,0,0,0,0.207125772535502,0,0.900310307305074,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0,1.68231958851302,5.55684906848136,0,0.264450566663544,4.26576501070468,6.50262681209228,2.57734922644187,1.4117846723634,0.889512175379481,0.760902504450237,0,0.988193728344065,0.754005626400808,1.59165177632921,0.779856348476481,0.898819408654221,0,0.398282546508734,0.379335801906163,1.25673363870702,1.1270773567308,0.814605311381257,0.969762435838129,1.68325967736765,0.822074982615345,0.147610147979602,0.784993639206874,0,0,0.667380422864376,0.786235980452812,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,1.70542270593436,1.79261474086228,1.52770577197669,1.17345124144251,1.17254380209271,0.952174563544055,1.17080188714679,2.04925687338048,3.98636441367795,5.42146213435456,3.27726629431476,2.76295970985433,1.3018415272336,0,0,0,0.275936746304732,0.321101179975584,0.468846746368813,1.14754461763673,0,0.315508219416257,0.390438744296638,1.07711698866399,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,1.60660658210904,1.84522110770749,2.13678724400706,1.14020871547503,3.29940245945071,0,3.8844901784797,2.11626489875326,1.69744571780308,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,1.8006109403131,1.03486947026204,2.7863814554107,2.48276327099183,4.10248280484762,3.78462747384878,1.8267896946876,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0.874442509889552,0.18542530201051,0.683483523191411,6.81076664278634,1.11116716421827,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,6.95939185878498,8.3360981522008,5.18425635944646,4.18176592028937,2.62035076495413,2.56242258131159,3.88471241909079,0.785267825952089,0.777689839750757,0,0,2.8408143748356,3.30916980914195,2.91676782516071,1.54991788173277,1.35164900392623,1.76035857968631,2.3436789271911,0.734015410979976,0.966336483304024,0.288030006257865,0,1.41907650703115,0.410843828659309,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,3.11357761254351,0.857473516316263,0,1.6942555278512,1.38097570952153,1.14579102687879,0.343706364687375,0,0,0,0.900642406448441,0,1.55328093525546,0.93408612825759,2.79317411380722,4.78054096111576,1.94485373654635,1.25767897576789,0.735374033800057,1.55572709461131,1.23621034343337,2.88827288632634,2.02157769411038,2.02783439912192,2.82939512079114,1.12369808963859,1.53660365771686,1.89537047553524,1.42888107384922,2.31768651889711,1.35036454324594,0.412085900803307,0.883193520806384,1.02860775715625,1.4198064492747,1.1921809497366,0.581385666529314,1.50575008664529,1.52306294205018,1.09756783723664,1.8414879800649,1.49384525230448,0.561142271657738,0.830445126869219,1.0835493061312,0.409231043169689,1.08455788830176,1.15743966588685,2.99772693525535,2.8071793013449,0.859484216193193,0.956441660344217,0.661774257358546,0 | |||
|short_description=p1@Tmem200a | |||
}} |
Revision as of 06:55, 4 August 2015
Short description: | p1@Tmem200a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem200a_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_NM_029881, uc007erw.2_5end |
EntrezGene: | 77220 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 3.80e-08 | 49 |
neurectoderm | 3.82e-07 | 64 |
neural plate | 3.82e-07 | 64 |
presumptive neural plate | 3.82e-07 | 64 |