Personal tools

FFCP PHASE1:Mm9::chr19:53215099..53215110,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=27360|HGNC=|UniProt=Q9QYB5,Q3UNK1,Q8BM29|association_with_transcript=164bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end|description=CAGE_peak_7_at_Add3_5end|id=chr19:53215099..53215110,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.37e-09!122;UBERON:0000025!1.59e-09!114;UBERON:0001049!4.15e-08!52;UBERON:0005068!4.15e-08!52;UBERON:0006241!4.15e-08!52;UBERON:0007135!4.15e-08!52;UBERON:0001017!1.71e-07!73;UBERON:0005743!1.71e-07!73;UBERON:0000073!5.25e-07!75;UBERON:0001016!5.25e-07!75;UBERON:0002346!8.41e-07!71;UBERON:0003075!8.41e-07!71;UBERON:0007284!8.41e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.41e-11,114;UBERON:0004111,4.10e-11,122;UBERON:0010314,1.70e-10,92;UBERON:0001049,5.30e-10,52;UBERON:0005068,5.30e-10,52;UBERON:0006241,5.30e-10,52;UBERON:0007135,5.30e-10,52;UBERON:0000073,5.69e-10,54;UBERON:0001017,6.50e-08,73;UBERON:0003076,8.93e-08,12;UBERON:0003057,8.93e-08,12;UBERON:0002020,1.67e-07,34;UBERON:0002346,1.77e-07,64;UBERON:0003075,1.77e-07,64;UBERON:0007284,1.77e-07,64;UBERON:0001016,2.08e-07,75;UBERON:0000955,3.67e-07,47;UBERON:0006238,3.67e-07,47|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0.171217968225505,0,0.342401459862411,0,0.333109761815663,0.202475267389826,0,1.73504190947031,2.19383093769182,2.54633791078818,1.53077922271926,0.0992909512008853,0,0.319984845586813,0,0,0,0,1.33016393619462,1.26015064879965,0,0,0,0,0.577703239502549,0.332469290716985,0,2.51118978442145,1.5626706890476,3.14114246384279,1.17646297606203,4.09827290975067,2.91306211818692,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0.439372365468944,0.972149495371417,1.1198913730029,0,2.18117387875057,0,1.00828139742739,0,1.14613375975503,1.54701627683233,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,2.57085885963423,3.09215957332259,0.244981598429908,0.479227355091182,0,0,1.53224805702225,2.61131106535614,0.263772575460388,0.274462930807229,0.52091337055676,1.67509799400829,1.68828783009504,1.98637722109853,2.35702868378934,3.55929201997757,1.3047961207771,0,0.604572480854284,0.869593466105033,1.72084775396277,0,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0,1.8125651855302,0.445326417194474,0.346970653532272,0.913396434936424,0.461230994512117,0.904335843315735,0.823120949949934,0.376999773989026,0,1.15679485535929,0.884610551949874,0.323533699894818,0.662524555381181,0,0,6.14839673724249,5.23616767033638,0.510914110417183,0,0,0,2.39665023047716,5.94750783664214,1.00523481690292,3.47648640384553,2.04572365864264,3.1168206683934,1.62241263067758,1.83310854930569,0.497627882440372,0.252722758433675,0.631325567659422,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.272145996605311,1.0249097622788,0.468508622798644,2.06962696591213,0.215567992932842,1.32374256117473,0.703804496655795,1.09597866213787,1.66828349535359,0.696504333044333,1.64625709126355,1.19420560091096,0,0.257347907114715,0.284163499395593,2.69263504296152,6.3322036194896,3.78130329068131,3.78791576936336,2.75469924446365,3.39387648352232,4.18561100550734,2.14618721119695,1.5179494507732,1.6455984991348,0.985004784474571,0.891756905004413,1.46199987425332,0.878200461164203,0.805238512562231,3.15434922846191,1.13195073617213,0,0,0.213288250535234,0.232236671860439,1.03093969057675,1.4117846723634,1.11189021922435,1.90225626112559,0.949058123089023,1.31759163779209,1.25667604400135,1.39269530428806,0.38992817423824,0.898819408654221,0.648414149624083,0.597423819763102,1.13800740571849,1.02823661348756,0,0.610953983535943,0.581857461502877,0.350679099451593,0.252946148497029,0.590440591918409,0.31399745568275,0.123397163921801,0.592905254174298,0,0.393117990226406,0.674586337154561,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,1.29327233116623,1.70542270593436,1.14075483509418,1.35796068620151,0.469380496577004,1.00503754465089,0.714130922658041,0.390267295715598,1.10344600874334,1.99318220683897,1.43509291791738,1.47476983244164,1.20879487306127,0.867894351489069,0,0,0,0,3.85321415970701,3.5163505977661,0,0.757412781613119,0.631016438832513,0.390438744296638,0.646270193198397,0.955875191810208,0.668396022247182,0.566153061577665,0,1.46127928955656,0.790575555893047,2.24924921495265,0.141940085208269,0.890328018336276,0.651547837414304,1.15479086080775,0,1.21390318077491,1.81394134178851,0.754420319023592,0,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0,1.05418608574999,0,1.02131881726136,0.18006109403131,1.16422815404479,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,1.40803024838226,0.21183207086382,0.661585194164886,0.8244312647074,0.645857706783622,0.482503399425247,0.358117032009409,0.492422699235184,0.291480836629851,4.63563255026274,0.512612642393558,0.412773735926445,0.370389054739423,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.632671987162271,1.21991680276109,0.86404272657441,0.418176592028937,0.655087691238533,1.21377911746339,0.495920734352016,0,0.518459893167171,0,0,0,0.330916980914195,0.777804753376191,0.516639293910924,0.844780627453891,0.821500670520278,0.5208175393758,1.25831213310853,0.241584120826006,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.965947970160952,0.563047426353546,0.915758121336325,0,2.50786052017682,6.7770221114048,2.76195141904306,4.01026859407578,0.68741272937475,0.685082519770642,2.2661816921691,1.35004500046361,3.60256962579376,3.17199686288943,4.14208249401456,0.62272408550506,1.59609949360412,0.512200817262403,0.486213434136588,0.838452650511929,0.735374033800057,0.888986911206461,1.03017528619447,0.320919209591815,1.01078884705519,0.760437899670719,0.754505365544305,1.12369808963859,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,1.15745532278223,0.412085900803307,0.883193520806384,0.342869252385415,0.177475806159338,0.953744759789284,1.74415699958794,1.69396884747595,0.676916863133412,0.914639864363863,1.05227884575137,0.679020569229309,1.12228454331548,0.474540072496697,0.29551344712669,0.818462086339379,0.929621047115796,0.385813221962283,0.749431733813838,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p7@Add3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:27360
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9QYB5,uniprot:Q3UNK1,uniprot:Q8BM29
|association_with_transcript=164bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end
|cluster_id=chr19:53215099..53215110,+
|description=CAGE_peak_7_at_Add3_5end
|id=chr19:53215099..53215110,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!1.37e-09!122;UBERON:0000025!1.59e-09!114;UBERON:0001049!4.15e-08!52;UBERON:0005068!4.15e-08!52;UBERON:0006241!4.15e-08!52;UBERON:0007135!4.15e-08!52;UBERON:0001017!1.71e-07!73;UBERON:0005743!1.71e-07!73;UBERON:0000073!5.25e-07!75;UBERON:0001016!5.25e-07!75;UBERON:0002346!8.41e-07!71;UBERON:0003075!8.41e-07!71;UBERON:0007284!8.41e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.41e-11,114;UBERON:0004111,4.10e-11,122;UBERON:0010314,1.70e-10,92;UBERON:0001049,5.30e-10,52;UBERON:0005068,5.30e-10,52;UBERON:0006241,5.30e-10,52;UBERON:0007135,5.30e-10,52;UBERON:0000073,5.69e-10,54;UBERON:0001017,6.50e-08,73;UBERON:0003076,8.93e-08,12;UBERON:0003057,8.93e-08,12;UBERON:0002020,1.67e-07,34;UBERON:0002346,1.77e-07,64;UBERON:0003075,1.77e-07,64;UBERON:0007284,1.77e-07,64;UBERON:0001016,2.08e-07,75;UBERON:0000955,3.67e-07,47;UBERON:0006238,3.67e-07,47
|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0.171217968225505,0,0.342401459862411,0,0.333109761815663,0.202475267389826,0,1.73504190947031,2.19383093769182,2.54633791078818,1.53077922271926,0.0992909512008853,0,0.319984845586813,0,0,0,0,1.33016393619462,1.26015064879965,0,0,0,0,0.577703239502549,0.332469290716985,0,2.51118978442145,1.5626706890476,3.14114246384279,1.17646297606203,4.09827290975067,2.91306211818692,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0.439372365468944,0.972149495371417,1.1198913730029,0,2.18117387875057,0,1.00828139742739,0,1.14613375975503,1.54701627683233,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,2.57085885963423,3.09215957332259,0.244981598429908,0.479227355091182,0,0,1.53224805702225,2.61131106535614,0.263772575460388,0.274462930807229,0.52091337055676,1.67509799400829,1.68828783009504,1.98637722109853,2.35702868378934,3.55929201997757,1.3047961207771,0,0.604572480854284,0.869593466105033,1.72084775396277,0,0,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0,1.8125651855302,0.445326417194474,0.346970653532272,0.913396434936424,0.461230994512117,0.904335843315735,0.823120949949934,0.376999773989026,0,1.15679485535929,0.884610551949874,0.323533699894818,0.662524555381181,0,0,6.14839673724249,5.23616767033638,0.510914110417183,0,0,0,2.39665023047716,5.94750783664214,1.00523481690292,3.47648640384553,2.04572365864264,3.1168206683934,1.62241263067758,1.83310854930569,0.497627882440372,0.252722758433675,0.631325567659422,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.272145996605311,1.0249097622788,0.468508622798644,2.06962696591213,0.215567992932842,1.32374256117473,0.703804496655795,1.09597866213787,1.66828349535359,0.696504333044333,1.64625709126355,1.19420560091096,0,0.257347907114715,0.284163499395593,2.69263504296152,6.3322036194896,3.78130329068131,3.78791576936336,2.75469924446365,3.39387648352232,4.18561100550734,2.14618721119695,1.5179494507732,1.6455984991348,0.985004784474571,0.891756905004413,1.46199987425332,0.878200461164203,0.805238512562231,3.15434922846191,1.13195073617213,0,0,0.213288250535234,0.232236671860439,1.03093969057675,1.4117846723634,1.11189021922435,1.90225626112559,0.949058123089023,1.31759163779209,1.25667604400135,1.39269530428806,0.38992817423824,0.898819408654221,0.648414149624083,0.597423819763102,1.13800740571849,1.02823661348756,0,0.610953983535943,0.581857461502877,0.350679099451593,0.252946148497029,0.590440591918409,0.31399745568275,0.123397163921801,0.592905254174298,0,0.393117990226406,0.674586337154561,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,1.29327233116623,1.70542270593436,1.14075483509418,1.35796068620151,0.469380496577004,1.00503754465089,0.714130922658041,0.390267295715598,1.10344600874334,1.99318220683897,1.43509291791738,1.47476983244164,1.20879487306127,0.867894351489069,0,0,0,0,3.85321415970701,3.5163505977661,0,0.757412781613119,0.631016438832513,0.390438744296638,0.646270193198397,0.955875191810208,0.668396022247182,0.566153061577665,0,1.46127928955656,0.790575555893047,2.24924921495265,0.141940085208269,0.890328018336276,0.651547837414304,1.15479086080775,0,1.21390318077491,1.81394134178851,0.754420319023592,0,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0,1.05418608574999,0,1.02131881726136,0.18006109403131,1.16422815404479,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,1.40803024838226,0.21183207086382,0.661585194164886,0.8244312647074,0.645857706783622,0.482503399425247,0.358117032009409,0.492422699235184,0.291480836629851,4.63563255026274,0.512612642393558,0.412773735926445,0.370389054739423,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.632671987162271,1.21991680276109,0.86404272657441,0.418176592028937,0.655087691238533,1.21377911746339,0.495920734352016,0,0.518459893167171,0,0,0,0.330916980914195,0.777804753376191,0.516639293910924,0.844780627453891,0.821500670520278,0.5208175393758,1.25831213310853,0.241584120826006,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.965947970160952,0.563047426353546,0.915758121336325,0,2.50786052017682,6.7770221114048,2.76195141904306,4.01026859407578,0.68741272937475,0.685082519770642,2.2661816921691,1.35004500046361,3.60256962579376,3.17199686288943,4.14208249401456,0.62272408550506,1.59609949360412,0.512200817262403,0.486213434136588,0.838452650511929,0.735374033800057,0.888986911206461,1.03017528619447,0.320919209591815,1.01078884705519,0.760437899670719,0.754505365544305,1.12369808963859,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,1.15745532278223,0.412085900803307,0.883193520806384,0.342869252385415,0.177475806159338,0.953744759789284,1.74415699958794,1.69396884747595,0.676916863133412,0.914639864363863,1.05227884575137,0.679020569229309,1.12228454331548,0.474540072496697,0.29551344712669,0.818462086339379,0.929621047115796,0.385813221962283,0.749431733813838,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,0.463735671240843
|short_description=p7@Add3
}}

Revision as of 07:37, 4 August 2015

Short description:p7@Add3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Add3_5end
Coexpression cluster:NA
Association with transcript: 164bp_to_ENSMUST00000111741, NM_001164099, NM_001164101, uc008hwi.2, uc008hwj.2_5end
EntrezGene:27360
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Add3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube1.41e-11114
anatomical conduit4.10e-11122
structure with developmental contribution from neural crest1.70e-1092
neural tube5.30e-1052
neural rod5.30e-1052
future spinal cord5.30e-1052
neural keel5.30e-1052
regional part of nervous system5.69e-1054
central nervous system6.50e-0873
posterior neural tube8.93e-0812
chordal neural plate8.93e-0812
gray matter1.67e-0734
neurectoderm1.77e-0764
neural plate1.77e-0764
presumptive neural plate1.77e-0764
nervous system2.08e-0775
brain3.67e-0747
future brain3.67e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:53215099..53215110,%2B&oldid=3752303"