FFCP PHASE1:Mm9::chr11:9018574..9018596,+: Difference between revisions
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{{FFCP|EntrezGene=22271|HGNC=|MCL_coexpression_id=126|UniProt=Q5SUC6|association_with_transcript=23bp_to_ENSMUST00000130522_5end|description=CAGE_peak_2_at_Upp1_5end|id=chr11:9018574..9018596,+|ontology_enrichment_celltype=CL:0000066!3.98e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,2.48e-10,25;CL:0000075,1.18e-08,7;CL:0000239,2.31e-08,6;CL:0000677,2.31e-08,6;CL:0000584,2.31e-08,6;CL:0002563,5.28e-08,9;CL:0002251,5.28e-08,9;CL:0002076,5.62e-08,15;CL:0000223,1.40e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.93e-10!59;UBERON:0000344!4.11e-10!15;UBERON:0000160!1.41e-09!43;UBERON:0001242!8.20e-09!13;UBERON:0000060!8.20e-09!13;UBERON:0001262!8.20e-09!13;UBERON:0004786!8.20e-09!13;UBERON:0004923!2.06e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.04e-15,15;UBERON:0001242,7.65e-13,13;UBERON:0001262,7.65e-13,13;UBERON:0004786,7.65e-13,13;UBERON:0005409,1.38e-12,47;UBERON:0000160,4.60e-12,31;UBERON:0004923,8.69e-12,24;UBERON:0003350,5.28e-08,9;UBERON:0004808,5.28e-08,9;UBERON:0001277,5.28e-08,9;UBERON:0000485,1.95e-07,11|phase1_expression=0.320297694209588,38.0383194326904,34.1249429542152,25.4069937497737,30.0537437967808,6.5472916045637,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.595303031057488,0,0,17.1191892388945,15.5998311125676,47.0870210574317,37.9070556619986,23.7018355954478,65.7481031319054,82.6658825612573,31.0422714917427,2.54012269383853,0,0,1.44425809875637,0.831173226792462,1.42918549383658,9.20769587621197,7.813353445238,6.80580867165938,4.1176204162171,4.78131839470912,1.94204141212461,0.755380907853464,0.608261587317087,0.367093504323363,0,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,6.13382165998791,2.79614772395106,3.18850937571846,3.44169550792555,4.75979933595425,0,0.649776417447669,0.896053774194671,1.82577746171277,0,0.259786004602869,0,1.12674735821344,0,0,0,6.71122227134764,4.56047757855178,4.54972000513305,6.16592950482924,0.258937883647172,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0.741584903203122,0.289198713839823,0.884610551949874,0.161766849947409,0,0,1.86391761218122,0,0,30.3993895698224,0.359445373517761,0,0.635351135365324,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.203678727700633,0,0,1.47309299120532,0.130120442962704,0.229902104433473,0.540186389416048,0.753524089178575,0.204109497453984,0.512454881139399,0.655912071918102,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,2.11073453982987,2.34080679899319,0.710234206755631,1.96764231747404,3.08534225774756,3.25547522650571,4.02410102099429,2.21854150497622,3.29119699826961,1.97000956894914,1.13496333364198,0.584799949701329,0.439100230582101,0.402619256281115,0.420579897128254,0.205809224758569,36.015647345234,11.9002754998595,0.213288250535234,0,0,0,0,0.380451252225118,11.3886974770683,0.164698954724011,0.502670417600539,0.596869416123452,0.779856348476481,14.3811105384675,13.400559092231,13.3424653080426,0.379335801906163,0.685491075658373,0,0.203651327845314,0.581857461502877,0.350679099451593,1.26473074248515,0.738050739898011,2.04098346193787,1.72756029490521,0.296452627087149,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0.717589654087649,0,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,1.75620283072019,0.788175720530955,0.8858587585951,0.159454768657487,1.3109065177259,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,0,0.35163505977661,0,0,0,0,0,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0,0,0.425820255624806,0.178065603667255,0,0.329940245945071,3.98235415019888,1.21390318077491,1.209294227859,0.377210159511796,0.295301892880773,1.22974059177571,1.29214146584111,0,0.712994756769443,0.948110273807448,2.10837217149998,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.608929898229199,7.04015124191131,7.62595455109753,0.220528398054962,1.15420377059036,0.322928853391811,0.72375509913787,1.67121281604391,2.9545361954111,4.08073171281791,0,0.512612642393558,1.23832120777933,0.185194527369712,0,0.136694227721025,0,3.0596117398894,3.07893195112048,2.3493995546752,1.90934123603023,0,0.609958401380546,0.648032044930808,1.67270636811575,1.9652630737156,1.48350781023303,1.40510874733071,5.49687478166462,1.29614973291793,0.621339313086926,0.56369293868419,0,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.10096644994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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22271 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SUC6 | |||
|association_with_transcript=23bp_to_ENSMUST00000130522_5end | |||
|cluster_id=chr11:9018574..9018596,+ | |||
|description=CAGE_peak_2_at_Upp1_5end | |||
|id=chr11:9018574..9018596,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.98e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.48e-10,25;CL:0000075,1.18e-08,7;CL:0000239,2.31e-08,6;CL:0000677,2.31e-08,6;CL:0000584,2.31e-08,6;CL:0002563,5.28e-08,9;CL:0002251,5.28e-08,9;CL:0002076,5.62e-08,15;CL:0000223,1.40e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.93e-10!59;UBERON:0000344!4.11e-10!15;UBERON:0000160!1.41e-09!43;UBERON:0001242!8.20e-09!13;UBERON:0000060!8.20e-09!13;UBERON:0001262!8.20e-09!13;UBERON:0004786!8.20e-09!13;UBERON:0004923!2.06e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.04e-15,15;UBERON:0001242,7.65e-13,13;UBERON:0001262,7.65e-13,13;UBERON:0004786,7.65e-13,13;UBERON:0005409,1.38e-12,47;UBERON:0000160,4.60e-12,31;UBERON:0004923,8.69e-12,24;UBERON:0003350,5.28e-08,9;UBERON:0004808,5.28e-08,9;UBERON:0001277,5.28e-08,9;UBERON:0000485,1.95e-07,11 | |||
|phase1_expression=0.320297694209588,38.0383194326904,34.1249429542152,25.4069937497737,30.0537437967808,6.5472916045637,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.595303031057488,0,0,17.1191892388945,15.5998311125676,47.0870210574317,37.9070556619986,23.7018355954478,65.7481031319054,82.6658825612573,31.0422714917427,2.54012269383853,0,0,1.44425809875637,0.831173226792462,1.42918549383658,9.20769587621197,7.813353445238,6.80580867165938,4.1176204162171,4.78131839470912,1.94204141212461,0.755380907853464,0.608261587317087,0.367093504323363,0,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,6.13382165998791,2.79614772395106,3.18850937571846,3.44169550792555,4.75979933595425,0,0.649776417447669,0.896053774194671,1.82577746171277,0,0.259786004602869,0,1.12674735821344,0,0,0,6.71122227134764,4.56047757855178,4.54972000513305,6.16592950482924,0.258937883647172,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0.741584903203122,0.289198713839823,0.884610551949874,0.161766849947409,0,0,1.86391761218122,0,0,30.3993895698224,0.359445373517761,0,0.635351135365324,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.203678727700633,0,0,1.47309299120532,0.130120442962704,0.229902104433473,0.540186389416048,0.753524089178575,0.204109497453984,0.512454881139399,0.655912071918102,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,2.11073453982987,2.34080679899319,0.710234206755631,1.96764231747404,3.08534225774756,3.25547522650571,4.02410102099429,2.21854150497622,3.29119699826961,1.97000956894914,1.13496333364198,0.584799949701329,0.439100230582101,0.402619256281115,0.420579897128254,0.205809224758569,36.015647345234,11.9002754998595,0.213288250535234,0,0,0,0,0.380451252225118,11.3886974770683,0.164698954724011,0.502670417600539,0.596869416123452,0.779856348476481,14.3811105384675,13.400559092231,13.3424653080426,0.379335801906163,0.685491075658373,0,0.203651327845314,0.581857461502877,0.350679099451593,1.26473074248515,0.738050739898011,2.04098346193787,1.72756029490521,0.296452627087149,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0.717589654087649,0,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,1.75620283072019,0.788175720530955,0.8858587585951,0.159454768657487,1.3109065177259,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,0,0.35163505977661,0,0,0,0,0,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0,0,0.425820255624806,0.178065603667255,0,0.329940245945071,3.98235415019888,1.21390318077491,1.209294227859,0.377210159511796,0.295301892880773,1.22974059177571,1.29214146584111,0,0.712994756769443,0.948110273807448,2.10837217149998,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.608929898229199,7.04015124191131,7.62595455109753,0.220528398054962,1.15420377059036,0.322928853391811,0.72375509913787,1.67121281604391,2.9545361954111,4.08073171281791,0,0.512612642393558,1.23832120777933,0.185194527369712,0,0.136694227721025,0,3.0596117398894,3.07893195112048,2.3493995546752,1.90934123603023,0,0.609958401380546,0.648032044930808,1.67270636811575,1.9652630737156,1.48350781023303,1.40510874733071,5.49687478166462,1.29614973291793,0.621339313086926,0.56369293868419,0,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.38983152295901,0.0962118416403295,0,0,3.32978930061097,5.20340368334959,2.85403847818933,0,0.750729901804728,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.64183841918363,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.192075457214608,0.459483751644906,0.476293691283074,0.115884325944855,0.964546102318525,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.846984423737976,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.749431733813838,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@Upp1 | |||
}} |
Revision as of 08:02, 4 August 2015
Short description: | p2@Upp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Upp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 23bp_to_ENSMUST00000130522_5end |
EntrezGene: | 22271 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.48e-10 | 25 |
columnar/cuboidal epithelial cell | 1.18e-08 | 7 |
brush border epithelial cell | 2.31e-08 | 6 |
gut absorptive cell | 2.31e-08 | 6 |
enterocyte | 2.31e-08 | 6 |
intestinal epithelial cell | 5.28e-08 | 9 |
epithelial cell of alimentary canal | 5.28e-08 | 9 |
endo-epithelial cell | 5.62e-08 | 15 |
endodermal cell | 1.40e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.04e-15 | 15 |
intestinal mucosa | 7.65e-13 | 13 |
wall of intestine | 7.65e-13 | 13 |
gastrointestinal system mucosa | 7.65e-13 | 13 |
gastrointestinal system | 1.38e-12 | 47 |
intestine | 4.60e-12 | 31 |
organ component layer | 8.69e-12 | 24 |
epithelium of mucosa | 5.28e-08 | 9 |
gastrointestinal system epithelium | 5.28e-08 | 9 |
intestinal epithelium | 5.28e-08 | 9 |
simple columnar epithelium | 1.95e-07 | 11 |