FFCP PHASE1:Mm9::chr11:9019226..9019233,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=781|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:9019226..9019233,+|id=chr11:9019226..9019233,+|ontology_enrichment_celltype=CL:0000239!2.74e-22!6;CL:0000677!2.74e-22!6;CL:0000212!2.74e-22!6;CL:0000584!2.74e-22!6;CL:0002563!1.45e-19!9;CL:0002251!1.45e-19!9;CL:0000075!4.88e-19!7;CL:0000066!1.70e-13!25;CL:0000473!2.54e-12!3;CL:0000627!2.54e-12!3;CL:0000682!2.54e-12!3;CL:0002076!2.04e-11!15;CL:0000223!2.36e-08!20|ontology_enrichment_celltype_v019_2=CL:0000682,1.16e-20,3;CL:0000239,6.96e-11,6;CL:0000677,6.96e-11,6;CL:0000584,6.96e-11,6;CL:0000066,1.69e-09,25;CL:0000075,2.08e-09,7;CL:0000473,3.29e-09,7;CL:0002563,1.97e-07,9;CL:0002251,1.97e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.23e-40!15;UBERON:0001242!5.97e-34!13;UBERON:0000060!5.97e-34!13;UBERON:0001262!5.97e-34!13;UBERON:0004786!5.97e-34!13;UBERON:0004923!1.58e-24!24;UBERON:0003350!1.45e-19!9;UBERON:0004808!1.45e-19!9;UBERON:0001277!1.45e-19!9;UBERON:0000160!2.46e-17!43;UBERON:0000485!7.25e-16!11;UBERON:0000331!7.39e-13!3;UBERON:0002116!7.39e-13!3;UBERON:0001204!7.39e-13!3;UBERON:0001168!7.39e-13!3;UBERON:0005409!7.19e-12!59;UBERON:0001962!3.24e-08!2;UBERON:0001961!3.24e-08!2;UBERON:0001744!3.24e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.48e-25,13;UBERON:0001262,1.48e-25,13;UBERON:0004786,1.48e-25,13;UBERON:0000344,4.24e-22,15;UBERON:0000331,1.30e-21,3;UBERON:0002116,1.30e-21,3;UBERON:0001204,1.30e-21,3;UBERON:0001168,1.30e-21,3;UBERON:0000160,4.47e-21,31;UBERON:0002108,2.23e-16,4;UBERON:0004923,1.19e-13,24;UBERON:0005409,1.38e-13,47;UBERON:0003350,1.97e-07,9;UBERON:0004808,1.97e-07,9;UBERON:0001277,1.97e-07,9|phase1_expression=0,2.09385244583617,0.909998478779072,5.14189159221611,2.00358291978539,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,4.59385571292016,1.7230479846363,1.29282739611533,7.03086651988583,12.3494763582366,1.77384408524244,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:9019226..9019233,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=781 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:9019226..9019233,+ | |||
|description=CAGE_peak_at_chr11:9019226..9019233,+ | |||
|id=chr11:9019226..9019233,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.74e-22!6;CL:0000677!2.74e-22!6;CL:0000212!2.74e-22!6;CL:0000584!2.74e-22!6;CL:0002563!1.45e-19!9;CL:0002251!1.45e-19!9;CL:0000075!4.88e-19!7;CL:0000066!1.70e-13!25;CL:0000473!2.54e-12!3;CL:0000627!2.54e-12!3;CL:0000682!2.54e-12!3;CL:0002076!2.04e-11!15;CL:0000223!2.36e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.16e-20,3;CL:0000239,6.96e-11,6;CL:0000677,6.96e-11,6;CL:0000584,6.96e-11,6;CL:0000066,1.69e-09,25;CL:0000075,2.08e-09,7;CL:0000473,3.29e-09,7;CL:0002563,1.97e-07,9;CL:0002251,1.97e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.23e-40!15;UBERON:0001242!5.97e-34!13;UBERON:0000060!5.97e-34!13;UBERON:0001262!5.97e-34!13;UBERON:0004786!5.97e-34!13;UBERON:0004923!1.58e-24!24;UBERON:0003350!1.45e-19!9;UBERON:0004808!1.45e-19!9;UBERON:0001277!1.45e-19!9;UBERON:0000160!2.46e-17!43;UBERON:0000485!7.25e-16!11;UBERON:0000331!7.39e-13!3;UBERON:0002116!7.39e-13!3;UBERON:0001204!7.39e-13!3;UBERON:0001168!7.39e-13!3;UBERON:0005409!7.19e-12!59;UBERON:0001962!3.24e-08!2;UBERON:0001961!3.24e-08!2;UBERON:0001744!3.24e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.48e-25,13;UBERON:0001262,1.48e-25,13;UBERON:0004786,1.48e-25,13;UBERON:0000344,4.24e-22,15;UBERON:0000331,1.30e-21,3;UBERON:0002116,1.30e-21,3;UBERON:0001204,1.30e-21,3;UBERON:0001168,1.30e-21,3;UBERON:0000160,4.47e-21,31;UBERON:0002108,2.23e-16,4;UBERON:0004923,1.19e-13,24;UBERON:0005409,1.38e-13,47;UBERON:0003350,1.97e-07,9;UBERON:0004808,1.97e-07,9;UBERON:0001277,1.97e-07,9 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,5.14189159221611,2.00358291978539,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,4.59385571292016,1.7230479846363,1.29282739611533,7.03086651988583,12.3494763582366,1.77384408524244,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:9019226..9019233,+ | |||
}} |
Latest revision as of 08:02, 4 August 2015
Short description: | p@chr11:9019226..9019233, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:9019226..9019233, + |
Coexpression cluster: | MCL_coexpression_mm9:781 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.16e-20 | 3 |
brush border epithelial cell | 6.96e-11 | 6 |
gut absorptive cell | 6.96e-11 | 6 |
enterocyte | 6.96e-11 | 6 |
epithelial cell | 1.69e-09 | 25 |
columnar/cuboidal epithelial cell | 2.08e-09 | 7 |
defensive cell | 3.29e-09 | 7 |
intestinal epithelial cell | 1.97e-07 | 9 |
epithelial cell of alimentary canal | 1.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.48e-25 | 13 |
wall of intestine | 1.48e-25 | 13 |
gastrointestinal system mucosa | 1.48e-25 | 13 |
mucosa | 4.24e-22 | 15 |
ileal mucosa | 1.30e-21 | 3 |
ileum | 1.30e-21 | 3 |
mucosa of small intestine | 1.30e-21 | 3 |
wall of small intestine | 1.30e-21 | 3 |
intestine | 4.47e-21 | 31 |
small intestine | 2.23e-16 | 4 |
organ component layer | 1.19e-13 | 24 |
gastrointestinal system | 1.38e-13 | 47 |
epithelium of mucosa | 1.97e-07 | 9 |
gastrointestinal system epithelium | 1.97e-07 | 9 |
intestinal epithelium | 1.97e-07 | 9 |