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FFCP PHASE1:Mm9::chr19:5568002..5568062,+: Difference between revisions

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{{FFCP|EntrezGene=381201|HGNC=|MCL_coexpression_id=2894|UniProt=Q3TAP4|association_with_transcript=0bp_to_uc008gdv.1_5end|description=CAGE_peak_1_at_Gm962_5end|id=chr19:5568002..5568062,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.93e-13!128;UBERON:0001555!1.93e-13!128;UBERON:0007026!1.93e-13!128;UBERON:0004119!2.62e-13!130;UBERON:0000925!2.62e-13!130;UBERON:0006595!2.62e-13!130;UBERON:0004921!1.19e-12!126;UBERON:0004185!1.19e-12!126;UBERON:0002193!1.54e-12!48;UBERON:0002390!3.20e-11!45;UBERON:0003061!3.20e-11!45;UBERON:0002405!1.59e-10!70;UBERON:0005409!6.07e-09!59;UBERON:0000160!1.29e-08!43;UBERON:0003104!4.24e-07!131;UBERON:0009142!4.24e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.54e-12,48;UBERON:0002405,1.54e-12,48;UBERON:0001007,1.98e-11,116;UBERON:0001555,1.98e-11,116;UBERON:0007026,1.98e-11,116;UBERON:0004119,2.70e-11,118;UBERON:0000925,2.70e-11,118;UBERON:0006595,2.70e-11,118;UBERON:0002390,3.20e-11,45;UBERON:0003061,3.20e-11,45;UBERON:0004921,1.07e-10,114;UBERON:0005409,1.89e-07,47;UBERON:0000160,2.68e-07,31|phase1_expression=2.24208385946712,18.8446720125255,21.3849642513082,18.1478526784098,19.0340377379612,6.71517087647559,10.5125688267987,16.3986620770802,3.09735188733667,3.27690336850791,2.56826952338257,3.03134204182278,20.2016861318823,18.4457049104085,7.32841475994458,10.5287139042709,6.99561878128147,19.2431920868525,18.921791837592,14.8536378129311,4.76242424845991,7.74469419366905,7.57479388502913,10.5594999043648,11.6998733344257,25.8404383851759,12.0613358924541,11.4199753323521,17.6721780094428,8.31699428207772,6.87364583031445,19.0509202037889,22.7573971406291,0,2.88851619751275,2.32728503501889,1.83752420636132,61.1056180875885,32.8160844699996,28.7938059185589,64.7054636834116,62.840184616177,57.7757320107073,6.04304726282771,7.19776211658553,3.30384153891027,10.1710874765245,5.01457859675027,5.93152693383074,6.9994763666742,4.75953833526233,5.75010257459886,11.2414346058683,9.42970784614748,7.39406358113421,4.3734104126111,4.01146815914259,6.70373719960675,2.83243045203437,1.5869729378161,1.90149421051854,3.72728985276045,2.66788438833342,27.8968912357234,31.6437236021432,37.6554460921433,21.8708080678435,13.831858991576,1.24427534770173,1.75507719831198,0.841299845405528,2.85650984403804,2.20868540951614,0.857435594504678,0.958454710182364,0.919218786610021,2.20231761998777,2.80912143787413,2.76491759861238,2.2420668914133,1.37231465403614,0.52091337055676,4.18774498502071,3.37657566019008,2.59757021220577,2.35702868378934,1.99320353118744,3.35519002485541,2.49896437999507,2.34271836331035,6.66688324013859,6.88339101585109,1.3599426674155,1.61910957491345,3.89865850468601,5.37632264516803,6.74133216632409,6.98764322570037,5.19572009205738,8.48014978824817,5.49289337129054,20.5322363862909,17.8363667794652,21.3320010945999,5.19578498426914,5.06719730950197,3.0331466700887,5.59501010623394,14.5005214842416,6.82833839698194,3.12273588179045,3.65358573974569,3.68984795609694,4.37095657602605,3.29248379979973,6.03199638382442,11.1237735480468,6.79616977523585,21.230653246797,4.20593809863264,6.40440403535141,5.33362778448744,11.1835056730873,7.02673912827713,6.0739544975902,14.0501380364725,3.23500836165985,4.19931911695385,2.41433431438823,2.99581278809645,2.74500361691176,2.51308704225729,4.51943232499919,2.04572365864264,3.94797284663164,2.59586020908412,3.46253837091075,9.57933673697716,4.29628689337247,5.89237196482127,1.43132487258974,0.229902104433473,0.900310649026746,2.26057226753573,1.2246569847239,2.562274405697,1.96773621575431,4.13925393182425,1.29340795759705,2.64748512234947,1.40760899331159,2.41115305670332,3.05851974148158,4.52727816478817,3.49829631893504,2.18937693500343,3.51106593656617,3.08817488537658,3.9782889915383,2.07125772535502,1.87620847984877,1.98068267607116,3.31442629819294,2.75469924446365,2.77680803197281,2.09280550275367,4.02410102099429,2.10177616260905,2.96207729844265,2.79084688934462,4.86412857275134,5.26319954731196,5.92785311285837,5.09984391289413,2.52347938276953,3.19004298375782,21.1468021109631,15.073682299822,1.91959425481711,2.55460339046482,6.95884291139304,6.85723983719365,9.78463392917429,10.8428606884159,8.54152310780121,10.0466362381647,12.5667604400135,10.544693018181,12.8676297498619,9.88701349519644,10.8069024937347,8.16479220342906,2.27601481143698,2.17072173958485,9.01661885384643,3.46207257337034,3.68509725618489,3.0158402552837,6.19718063817721,5.46157547524528,5.02395929092399,4.81248939295022,5.92905254174298,7.00749444007595,5.30709286805648,5.39669069723649,5.47722327748958,6.75296047306767,5.0925170356284,9.49397253587675,3.72911021582581,5.49122826376163,2.87536413054709,5.20997326735905,3.43241440426017,5.05157755894223,4.12614051100398,3.85954817090694,9.42241269849684,0.947457058852424,1.95557971730431,3.05541154395339,3.98973422090454,6.365237782789,5.2369600994923,3.9026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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:381201
|HGNC=
|MCL_coexpression_id=2894
|TSSclassifier=NA
|UniProt=uniprot:Q3TAP4
|association_with_transcript=0bp_to_uc008gdv.1_5end
|cluster_id=chr19:5568002..5568062,+
|description=CAGE_peak_1_at_Gm962_5end
|id=chr19:5568002..5568062,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.54e-12,48;UBERON:0002405,1.54e-12,48;UBERON:0001007,1.98e-11,116;UBERON:0001555,1.98e-11,116;UBERON:0007026,1.98e-11,116;UBERON:0004119,2.70e-11,118;UBERON:0000925,2.70e-11,118;UBERON:0006595,2.70e-11,118;UBERON:0002390,3.20e-11,45;UBERON:0003061,3.20e-11,45;UBERON:0004921,1.07e-10,114;UBERON:0005409,1.89e-07,47;UBERON:0000160,2.68e-07,31
|phase1_expression=2.24208385946712,18.8446720125255,21.3849642513082,18.1478526784098,19.0340377379612,6.71517087647559,10.5125688267987,16.3986620770802,3.09735188733667,3.27690336850791,2.56826952338257,3.03134204182278,20.2016861318823,18.4457049104085,7.32841475994458,10.5287139042709,6.99561878128147,19.2431920868525,18.921791837592,14.8536378129311,4.76242424845991,7.74469419366905,7.57479388502913,10.5594999043648,11.6998733344257,25.8404383851759,12.0613358924541,11.4199753323521,17.6721780094428,8.31699428207772,6.87364583031445,19.0509202037889,22.7573971406291,0,2.88851619751275,2.32728503501889,1.83752420636132,61.1056180875885,32.8160844699996,28.7938059185589,64.7054636834116,62.840184616177,57.7757320107073,6.04304726282771,7.19776211658553,3.30384153891027,10.1710874765245,5.01457859675027,5.93152693383074,6.9994763666742,4.75953833526233,5.75010257459886,11.2414346058683,9.42970784614748,7.39406358113421,4.3734104126111,4.01146815914259,6.70373719960675,2.83243045203437,1.5869729378161,1.90149421051854,3.72728985276045,2.66788438833342,27.8968912357234,31.6437236021432,37.6554460921433,21.8708080678435,13.831858991576,1.24427534770173,1.75507719831198,0.841299845405528,2.85650984403804,2.20868540951614,0.857435594504678,0.958454710182364,0.919218786610021,2.20231761998777,2.80912143787413,2.76491759861238,2.2420668914133,1.37231465403614,0.52091337055676,4.18774498502071,3.37657566019008,2.59757021220577,2.35702868378934,1.99320353118744,3.35519002485541,2.49896437999507,2.34271836331035,6.66688324013859,6.88339101585109,1.3599426674155,1.61910957491345,3.89865850468601,5.37632264516803,6.74133216632409,6.98764322570037,5.19572009205738,8.48014978824817,5.49289337129054,20.5322363862909,17.8363667794652,21.3320010945999,5.19578498426914,5.06719730950197,3.0331466700887,5.59501010623394,14.5005214842416,6.82833839698194,3.12273588179045,3.65358573974569,3.68984795609694,4.37095657602605,3.29248379979973,6.03199638382442,11.1237735480468,6.79616977523585,21.230653246797,4.20593809863264,6.40440403535141,5.33362778448744,11.1835056730873,7.02673912827713,6.0739544975902,14.0501380364725,3.23500836165985,4.19931911695385,2.41433431438823,2.99581278809645,2.74500361691176,2.51308704225729,4.51943232499919,2.04572365864264,3.94797284663164,2.59586020908412,3.46253837091075,9.57933673697716,4.29628689337247,5.89237196482127,1.43132487258974,0.229902104433473,0.900310649026746,2.26057226753573,1.2246569847239,2.562274405697,1.96773621575431,4.13925393182425,1.29340795759705,2.64748512234947,1.40760899331159,2.41115305670332,3.05851974148158,4.52727816478817,3.49829631893504,2.18937693500343,3.51106593656617,3.08817488537658,3.9782889915383,2.07125772535502,1.87620847984877,1.98068267607116,3.31442629819294,2.75469924446365,2.77680803197281,2.09280550275367,4.02410102099429,2.10177616260905,2.96207729844265,2.79084688934462,4.86412857275134,5.26319954731196,5.92785311285837,5.09984391289413,2.52347938276953,3.19004298375782,21.1468021109631,15.073682299822,1.91959425481711,2.55460339046482,6.95884291139304,6.85723983719365,9.78463392917429,10.8428606884159,8.54152310780121,10.0466362381647,12.5667604400135,10.544693018181,12.8676297498619,9.88701349519644,10.8069024937347,8.16479220342906,2.27601481143698,2.17072173958485,9.01661885384643,3.46207257337034,3.68509725618489,3.0158402552837,6.19718063817721,5.46157547524528,5.02395929092399,4.81248939295022,5.92905254174298,7.00749444007595,5.30709286805648,5.39669069723649,5.47722327748958,6.75296047306767,5.0925170356284,9.49397253587675,3.72911021582581,5.49122826376163,2.87536413054709,5.20997326735905,3.43241440426017,5.05157755894223,4.12614051100398,3.85954817090694,9.42241269849684,0.947457058852424,1.95557971730431,3.05541154395339,3.98973422090454,6.365237782789,5.2369600994923,3.90267295715598,4.72905432318573,4.4292937929755,5.58091690301205,8.68475567993411,8.28887912956299,6.219909519005,16.5870412333199,29.914812610029,4.42587845717133,5.51873492609465,5.29816946959713,3.98519734413491,1.80328439914343,3.02965112645248,5.36363973007636,1.17131623288992,2.36965737506079,5.73525115086125,3.7875774594007,4.81230102341015,4.04810701674894,3.21481443702443,2.76701444562566,2.89189184779626,6.67118400478862,5.1639025063504,2.11753047159649,6.59880491890142,14.6019652173959,3.8844901784797,3.93020624054176,7.35559811048003,8.85905678642318,7.68587869859819,5.94385074286909,6.5436071305951,4.27796854061666,5.05658812697306,8.4334886859999,11.3449097573006,4.42571487479924,1.98067203434441,4.39819524861365,4.92975180572662,4.43350584105684,4.99432689285798,3.29098041204242,5.48036908406279,4.4587624532105,4.2366414172764,6.61585194164886,4.9465875882444,1.77610869365496,3.25689794612042,2.26807453605959,1.64140899745061,13.1166376483433,4.45020724825223,13.4987995830304,6.3979929068599,6.11141940320049,7.15800136617826,6.42462870288818,9.15112692826091,2.37969801991397,2.93898049879682,3.45499934511059,2.86401185404534,4.27053591334533,4.87966721104437,4.86024033698106,4.18176592028937,4.80397640241591,3.50647300600534,5.20716771069616,4.71160695571253,8.55458823725833,9.94142900939081,2.81846469342095,2.24274819065968,2.81279433777066,3.88902376688095,2.58319646955462,0.844780627453891,1.76035857968631,2.21347454234715,2.20204623293993,4.59009829569411,2.01621004380506,12.6404448251271,7.50083296573608,5.75181360123033,6.62596197186755,10.025494957379,6.95384741734427,6.12996792551841,6.79371825003055,5.95702054694071,8.68757595866998,7.25948532985252,9.94070383545475,11.6416328384799,11.8045671203385,4.0811469050738,0.665957860122194,0.986852422704233,1.00730769818447,8.69353173144857,4.69206188627955,5.67770035228522,4.07299920250225,13.0408747049194,2.82375921308533,2.30162618253588,2.29158205375759,1.71853182343688,4.11049511862385,5.2877572817279,2.02506750069542,4.95353323546643,2.71885445390523,1.03552062350364,1.03787347584177,1.59609949360412,2.21953687480374,4.37592090722929,2.51535795153579,6.25067928730048,3.55594764482584,3.7086310303001,4.1719497246936,5.30664144703975,4.81610669791456,4.90428487603798,2.43467919421694,3.71345883948242,3.21638626151434,4.76293691283074,4.05595140806994,3.47236596834669,4.12085900803307,2.35518272215036,1.71434626192708,4.61437096014278,3.09967046931517,2.0348498328526,3.85848459702856,3.72304274723377,2.19513567447327,3.41990624869196,2.71608227691724,3.36685362994643,3.2031454893527,2.85662998889134,5.32000356120596,4.33823155320705,4.62975866354739,4.49659040288303,6.08222181958062,2.79332370262788,2.29545998482612,6.17655973534643,4.63735671240843
|short_description=p1@Gm962
}}

Revision as of 08:47, 4 August 2015

Short description:p1@Gm962
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm962_5end
Coexpression cluster:MCL_coexpression_mm9:2894
Association with transcript: 0bp_to_uc008gdv.1_5end
EntrezGene:381201
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm962

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.53
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H925.84
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I211.42
Ileum epithelium, pool1.CNhs13199.10252-104B917.67
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G861.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G964.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H262.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H457.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E731.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D237.66
Mouse Microglia, donor1.CNhs12629.11718-123C821.87
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H914.50
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.58
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I321.15
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D86.96
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D39.78
intestine, embryo E18.CNhs10526.1289-20F710.84
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.02
kidney, neonate N10.CNhs11206.758-6D56.20
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F87.01
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B19.42
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H26.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A129.91
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I113.12
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G213.50
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H16.42
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I18.55
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I25.75
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C110.03
thymus, embryo E18.CNhs10595.1273-19G46.95
thymus, neonate N02.CNhs11181.1541-43F86.13
thymus, neonate N03.CNhs11137.2104-43C76.79
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D38.69
thymus, neonate N10.CNhs11194.748-24E47.26
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G711.64
thymus, neonate N30.CNhs11132.1393-42G211.80
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.54e-1248
immune system1.54e-1248
digestive system1.98e-11116
digestive tract1.98e-11116
primitive gut1.98e-11116
endoderm-derived structure2.70e-11118
endoderm2.70e-11118
presumptive endoderm2.70e-11118
hematopoietic system3.20e-1145
blood island3.20e-1145
subdivision of digestive tract1.07e-10114
gastrointestinal system1.89e-0747
intestine2.68e-0731
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