FFCP PHASE1:Mm9::chr11:94335402..94335426,-: Difference between revisions
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{{FFCP|EntrezGene=12291|HGNC=|MCL_coexpression_id=2738|UniProt=Q5SUG4,Q5SUF6,Q5SUG2,Q5SUG1,Q5SUG3,Q5SUF7,Q5SUF9,Q5SUF8,Q5SUF5,Q5SUG0|association_with_transcript=0bp_to_ENSMUST00000100561,ENSMUST00000103166,ENSMUST00000107785,ENSMUST00000107786,ENSMUST00000107788,ENSMUST00000107789,ENSMUST00000107790,ENSMUST00000107791,ENSMUST00000107792,ENSMUST00000107793_5end|description=CAGE_peak_4_at_Cacna1g_5end|id=chr11:94335402..94335426,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.71e-09!52;UBERON:0005068!3.71e-09!52;UBERON:0006241!3.71e-09!52;UBERON:0007135!3.71e-09!52;UBERON:0000468!4.22e-09!333;UBERON:0002346!4.79e-09!71;UBERON:0003075!4.79e-09!71;UBERON:0007284!4.79e-09!71;UBERON:0000033!8.89e-09!63;UBERON:0000955!8.89e-08!50;UBERON:0006238!8.89e-08!50;UBERON:0003056!1.75e-07!49;UBERON:0002616!2.87e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.95e-09,64;UBERON:0003075,7.95e-09,64;UBERON:0007284,7.95e-09,64;UBERON:0000073,1.35e-08,54;UBERON:0001049,2.20e-08,52;UBERON:0005068,2.20e-08,52;UBERON:0006241,2.20e-08,52;UBERON:0007135,2.20e-08,52;UBERON:0010371,2.64e-08,73;UBERON:0010314,4.47e-07,92;UBERON:0000955,7.09e-07,47;UBERON:0006238,7.09e-07,47;UBERON:0002102,8.53e-07,7;UBERON:0004710,8.53e-07,7;UBERON:0005419,8.53e-07,7;UBERON:0005417,8.53e-07,7;UBERON:0005729,8.53e-07,7|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.53442328048786,0.367093504323363,3.9119567217402,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,2.02316460859598,2.64495489636016,4.43681982454325,0.677689064138264,0,0,0,0,0,1.15265491596466,0.518448061542388,0.405017814995072,0.841299845405528,4.57041575046086,2.87129103237098,0.244981598429908,0.287536413054709,0,0,2.68143409978894,2.91852413186863,3.82470234417562,3.93396867490361,2.6045668527838,1.95428099300967,2.8138130501584,1.83357897332172,7.36571463684169,3.13217697758026,2.79599168737951,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0,0,0.45673551887624,0,0.148442139064825,1.56136794089522,1.52232739156071,0.461230994512117,0.301445281105245,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,3.39710384889559,0.662524555381181,0,0,9.9545470983926,12.5668024088073,0.510914110417183,0,0,0,2.39665023047716,1.83000241127451,2.63874139437015,2.60736480288415,2.55715457330331,2.49345653471472,4.38051410282946,4.48093200941392,0.497627882440372,0.252722758433675,0.420883711772948,3.25301107406759,2.5289231487682,1.98068342785884,3.31550599238573,2.78949646520444,3.07472928683639,1.78033276663485,2.06962696591213,6.68260778091811,11.9136830505726,11.6127741948206,6.57587197282724,4.17070873838397,7.3132954969655,6.79081050146213,2.7864797354589,0,0,0,0.207125772535502,1.17263029990548,1.2604344302271,3.55117103377815,0.983821158737019,2.1597395804233,2.55787339225449,2.14618721119695,1.86824547787471,2.63295759861569,1.80584210487005,1.29710095273369,1.31579988682799,2.19550115291051,1.47627060636409,3.78521907415429,1.64647379806855,0,0.264450566663544,0.853153002140936,2.55460339046482,2.96395161040815,2.62188582010345,1.11189021922435,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.397912944082302,1.36474860983384,3.59527763461689,0.432276099749388,0.199141273254367,0.569003702859245,2.17072173958485,4.50830942692322,2.44381593414377,1.93952487167626,1.61312385747733,1.70738650235495,0.442830443938806,0.31399745568275,0.493588655687202,0,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,2.28150967018836,1.52770577197669,0.938760993154008,2.84760637651087,3.57065461329021,0.975668239288994,0.945810864637146,0.664394068946325,2.39182152986231,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,2.88991061978026,2.22702204525186,1.80328439914343,1.51482556322624,0,0.390438744296638,0.430846795465598,0,0,0,0.404810701674894,1.16902343164525,0,12.2102100240287,0.283880170416537,7.12262414669021,5.86393053672874,2.47455184458803,0,1.69946445308487,0.906970670894253,0.943025398779491,2.06711325016541,2.15204603560749,1.80899805217755,2.90826983582004,1.06949213515416,0,0,0,0.340439605753788,3.6012218806262,2.32845630808958,3.00071849044229,3.54680467284547,4.10248280484762,2.79733335023606,2.43571959291679,0,0.21183207086382,0,0.32977250588296,4.19807509409354,3.37752379597673,1.90995750405018,0.820704498725306,0.291480836629851,1.48340241608408,0,5.15967169908056,2.03713980106683,0.188368457004691,0,0,0,0,0,0,3.32152793260192,4.26970880966382,1.94409613479242,1.88179466413022,1.09181281873089,0.809186078308924,0.991841468704031,0.785267825952089,0.129614973291793,0,0,1.79419855252775,2.31641886639937,3.11121901350476,2.97067593998782,2.70329800785245,2.22978753426933,1.5624526181274,0.314578033277133,0,0,0,2.02725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0,0.120195449519969,0.295379054349154,0.302899349844443,0,0,0,0,0.116876902181569,0.453460767230423,0.887943813496259,0.0897138566094757,0.335769232728157,0.19318959403219,1.87682475451182,2.93042598827624,1.50057865355346,0.501572104035363,3.95326289831947,2.76195141904306,4.58316410751517,1.89038500578056,1.37016503954128,2.2661816921691,2.02506750069542,1.35096360967266,0.906284817968409,2.07104124700728,2.28332164685189,5.98537310101547,5.80494259564056,4.86213434136588,1.88651846365184,2.02227859295016,2.22246727801615,2.47242068686673,3.85103051510178,4.29585259998456,3.29523089857312,2.07488975524684,3.27745276144588,3.13723246783859,3.21638626151434,2.38146845641537,4.98302601562879,2.70072908649187,2.06042950401653,3.23837624295674,1.37147700954166,2.66213709239006,2.14592570952589,2.32554266611726,2.25862512996793,2.5384382367503,2.74391959309159,0.789209134313529,3.25929873230068,0,3.6776855618494,4.33419722452479,0.818462086339379,3.56354734727722,2.50778594275484,3.2475375131933,3.50897412668113,2.79332370262788,3.25190164517034,2.20591419119516,1.39120701372253|short_description=p4@Cacna1g}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12291 | |||
|HGNC= | |||
|MCL_coexpression_id=2738 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SUG4,uniprot:Q5SUF6,uniprot:Q5SUG2,uniprot:Q5SUG1,uniprot:Q5SUG3,uniprot:Q5SUF7,uniprot:Q5SUF9,uniprot:Q5SUF8,uniprot:Q5SUF5,uniprot:Q5SUG0 | |||
|association_with_transcript=0bp_to_ENSMUST00000100561,ENSMUST00000103166,ENSMUST00000107785,ENSMUST00000107786,ENSMUST00000107788,ENSMUST00000107789,ENSMUST00000107790,ENSMUST00000107791,ENSMUST00000107792,ENSMUST00000107793_5end | |||
|cluster_id=chr11:94335402..94335426,- | |||
|description=CAGE_peak_4_at_Cacna1g_5end | |||
|id=chr11:94335402..94335426,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.71e-09!52;UBERON:0005068!3.71e-09!52;UBERON:0006241!3.71e-09!52;UBERON:0007135!3.71e-09!52;UBERON:0000468!4.22e-09!333;UBERON:0002346!4.79e-09!71;UBERON:0003075!4.79e-09!71;UBERON:0007284!4.79e-09!71;UBERON:0000033!8.89e-09!63;UBERON:0000955!8.89e-08!50;UBERON:0006238!8.89e-08!50;UBERON:0003056!1.75e-07!49;UBERON:0002616!2.87e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.95e-09,64;UBERON:0003075,7.95e-09,64;UBERON:0007284,7.95e-09,64;UBERON:0000073,1.35e-08,54;UBERON:0001049,2.20e-08,52;UBERON:0005068,2.20e-08,52;UBERON:0006241,2.20e-08,52;UBERON:0007135,2.20e-08,52;UBERON:0010371,2.64e-08,73;UBERON:0010314,4.47e-07,92;UBERON:0000955,7.09e-07,47;UBERON:0006238,7.09e-07,47;UBERON:0002102,8.53e-07,7;UBERON:0004710,8.53e-07,7;UBERON:0005419,8.53e-07,7;UBERON:0005417,8.53e-07,7;UBERON:0005729,8.53e-07,7 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.53442328048786,0.367093504323363,3.9119567217402,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,2.02316460859598,2.64495489636016,4.43681982454325,0.677689064138264,0,0,0,0,0,1.15265491596466,0.518448061542388,0.405017814995072,0.841299845405528,4.57041575046086,2.87129103237098,0.244981598429908,0.287536413054709,0,0,2.68143409978894,2.91852413186863,3.82470234417562,3.93396867490361,2.6045668527838,1.95428099300967,2.8138130501584,1.83357897332172,7.36571463684169,3.13217697758026,2.79599168737951,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0,0,0.45673551887624,0,0.148442139064825,1.56136794089522,1.52232739156071,0.461230994512117,0.301445281105245,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,3.39710384889559,0.662524555381181,0,0,9.9545470983926,12.5668024088073,0.510914110417183,0,0,0,2.39665023047716,1.83000241127451,2.63874139437015,2.60736480288415,2.55715457330331,2.49345653471472,4.38051410282946,4.48093200941392,0.497627882440372,0.252722758433675,0.420883711772948,3.25301107406759,2.5289231487682,1.98068342785884,3.31550599238573,2.78949646520444,3.07472928683639,1.78033276663485,2.06962696591213,6.68260778091811,11.9136830505726,11.6127741948206,6.57587197282724,4.17070873838397,7.3132954969655,6.79081050146213,2.7864797354589,0,0,0,0.207125772535502,1.17263029990548,1.2604344302271,3.55117103377815,0.983821158737019,2.1597395804233,2.55787339225449,2.14618721119695,1.86824547787471,2.63295759861569,1.80584210487005,1.29710095273369,1.31579988682799,2.19550115291051,1.47627060636409,3.78521907415429,1.64647379806855,0,0.264450566663544,0.853153002140936,2.55460339046482,2.96395161040815,2.62188582010345,1.11189021922435,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.397912944082302,1.36474860983384,3.59527763461689,0.432276099749388,0.199141273254367,0.569003702859245,2.17072173958485,4.50830942692322,2.44381593414377,1.93952487167626,1.61312385747733,1.70738650235495,0.442830443938806,0.31399745568275,0.493588655687202,0,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,2.28150967018836,1.52770577197669,0.938760993154008,2.84760637651087,3.57065461329021,0.975668239288994,0.945810864637146,0.664394068946325,2.39182152986231,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,2.88991061978026,2.22702204525186,1.80328439914343,1.51482556322624,0,0.390438744296638,0.430846795465598,0,0,0,0.404810701674894,1.16902343164525,0,12.2102100240287,0.283880170416537,7.12262414669021,5.86393053672874,2.47455184458803,0,1.69946445308487,0.906970670894253,0.943025398779491,2.06711325016541,2.15204603560749,1.80899805217755,2.90826983582004,1.06949213515416,0,0,0,0.340439605753788,3.6012218806262,2.32845630808958,3.00071849044229,3.54680467284547,4.10248280484762,2.79733335023606,2.43571959291679,0,0.21183207086382,0,0.32977250588296,4.19807509409354,3.37752379597673,1.90995750405018,0.820704498725306,0.291480836629851,1.48340241608408,0,5.15967169908056,2.03713980106683,0.188368457004691,0,0,0,0,0,0,3.32152793260192,4.26970880966382,1.94409613479242,1.88179466413022,1.09181281873089,0.809186078308924,0.991841468704031,0.785267825952089,0.129614973291793,0,0,1.79419855252775,2.31641886639937,3.11121901350476,2.97067593998782,2.70329800785245,2.22978753426933,1.5624526181274,0.314578033277133,0,0,0,2.02725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0,0.120195449519969,0.295379054349154,0.302899349844443,0,0,0,0,0.116876902181569,0.453460767230423,0.887943813496259,0.0897138566094757,0.335769232728157,0.19318959403219,1.87682475451182,2.93042598827624,1.50057865355346,0.501572104035363,3.95326289831947,2.76195141904306,4.58316410751517,1.89038500578056,1.37016503954128,2.2661816921691,2.02506750069542,1.35096360967266,0.906284817968409,2.07104124700728,2.28332164685189,5.98537310101547,5.80494259564056,4.86213434136588,1.88651846365184,2.02227859295016,2.22246727801615,2.47242068686673,3.85103051510178,4.29585259998456,3.29523089857312,2.07488975524684,3.27745276144588,3.13723246783859,3.21638626151434,2.38146845641537,4.98302601562879,2.70072908649187,2.06042950401653,3.23837624295674,1.37147700954166,2.66213709239006,2.14592570952589,2.32554266611726,2.25862512996793,2.5384382367503,2.74391959309159,0.789209134313529,3.25929873230068,0,3.6776855618494,4.33419722452479,0.818462086339379,3.56354734727722,2.50778594275484,3.2475375131933,3.50897412668113,2.79332370262788,3.25190164517034,2.20591419119516,1.39120701372253 | |||
|short_description=p4@Cacna1g | |||
}} |
Revision as of 08:48, 4 August 2015
Short description: | p4@Cacna1g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cacna1g_5end |
Coexpression cluster: | MCL_coexpression_mm9:2738 |
Association with transcript: | 0bp_to_ENSMUST00000100561, ENSMUST00000103166, ENSMUST00000107785, ENSMUST00000107786, ENSMUST00000107788, ENSMUST00000107789, ENSMUST00000107790, ENSMUST00000107791, ENSMUST00000107792, ENSMUST00000107793_5end |
EntrezGene: | 12291 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.95e-09 | 64 |
neural plate | 7.95e-09 | 64 |
presumptive neural plate | 7.95e-09 | 64 |
regional part of nervous system | 1.35e-08 | 54 |
neural tube | 2.20e-08 | 52 |
neural rod | 2.20e-08 | 52 |
future spinal cord | 2.20e-08 | 52 |
neural keel | 2.20e-08 | 52 |
ecto-epithelium | 2.64e-08 | 73 |
structure with developmental contribution from neural crest | 4.47e-07 | 92 |
brain | 7.09e-07 | 47 |
future brain | 7.09e-07 | 47 |
forelimb | 8.53e-07 | 7 |
pectoral appendage | 8.53e-07 | 7 |
pectoral appendage bud | 8.53e-07 | 7 |
forelimb bud | 8.53e-07 | 7 |
forelimb/pectoral fin field | 8.53e-07 | 7 |