FFCP PHASE1:Mm9::chr11:94622249..94622273,-: Difference between revisions
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{{FFCP|EntrezGene=217122|HGNC=|MCL_coexpression_id=12|UniProt=Q3TDT7|association_with_transcript=222bp_to_ENSMUST00000100556,NM_001105561,uc007kzk.2_5end|description=CAGE_peak_2_at_Gm11545_5end|id=chr11:94622249..94622273,-|ontology_enrichment_celltype=CL:0002563!4.47e-09!9;CL:0002251!4.47e-09!9;CL:0000239!8.18e-07!6;CL:0000677!8.18e-07!6;CL:0000212!8.18e-07!6;CL:0000584!8.18e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.21e-18,9;CL:0002251,1.21e-18,9;CL:0000239,1.63e-13,6;CL:0000677,1.63e-13,6;CL:0000584,1.63e-13,6;CL:0000075,1.85e-11,7;CL:0000066,1.21e-10,25;CL:0002076,1.95e-10,15;CL:0000682,3.09e-08,3;CL:0000223,2.23e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.09e-17!59;UBERON:0000160!3.75e-16!43;UBERON:0000344!1.53e-14!15;UBERON:0004923!5.89e-13!24;UBERON:0001242!1.18e-12!13;UBERON:0000060!1.18e-12!13;UBERON:0001262!1.18e-12!13;UBERON:0004786!1.18e-12!13;UBERON:0004119!9.41e-11!130;UBERON:0000925!9.41e-11!130;UBERON:0006595!9.41e-11!130;UBERON:0001007!1.03e-10!128;UBERON:0001555!1.03e-10!128;UBERON:0007026!1.03e-10!128;UBERON:0004921!1.34e-09!126;UBERON:0004185!1.34e-09!126;UBERON:0003350!4.47e-09!9;UBERON:0004808!4.47e-09!9;UBERON:0001277!4.47e-09!9;UBERON:0000485!8.02e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.67e-49,31;UBERON:0005409,7.08e-37,47;UBERON:0000344,4.18e-31,15;UBERON:0001242,8.61e-27,13;UBERON:0001262,8.61e-27,13;UBERON:0004786,8.61e-27,13;UBERON:0004923,2.69e-20,24;UBERON:0003350,1.21e-18,9;UBERON:0004808,1.21e-18,9;UBERON:0001277,1.21e-18,9;UBERON:0000485,6.56e-15,11;UBERON:0001007,1.04e-12,116;UBERON:0001555,1.04e-12,116;UBERON:0007026,1.04e-12,116;UBERON:0004119,2.31e-12,118;UBERON:0000925,2.31e-12,118;UBERON:0006595,2.31e-12,118;UBERON:0004921,8.33e-11,114;UBERON:0002108,1.37e-09,4;UBERON:0000331,1.30e-07,3;UBERON:0002116,1.30e-07,3;UBERON:0001204,1.30e-07,3;UBERON:0001168,1.30e-07,3|phase1_expression=0,27.9180326111489,30.0299497997094,13.3084252975005,13.5241847085514,12.9267039372155,14.4839837169226,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0,0,26.2387573381187,24.0879745120529,28.137366241636,32.7379117080897,41.8014191410625,19.7624356234629,11.8454160987167,27.9380443425684,0,0,0,6.93243887403059,8.47796691328311,7.75843553797003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0.148442139064825,0,0,0,0,0.117588707135705,0,1.23597483867187,0,0,0,0,0,0,0,0,20.4365644166873,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0.146199987425332,0,0,0,0,15.1992640172547,12.9580777665137,0.213288250535234,0,1.28867461322093,5.44545516483025,5.11469500843202,7.79925067061493,10.9141684155238,8.39964669092456,4.02136334080431,6.96347652144028,6.04388670069272,14.3811105384675,16.4264917904768,9.35963984295526,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.81931657357869,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0.488660878060728,5.93892442701128,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,14.8655226681224,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.546776910884101,0,0.169978429993855,0,0,0,0,0.203319467126849,1.29606408986162,0.418176592028937,1.74690050996942,0,0.247960367176008,0,1.55537967950151,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.13020438484395,0,0.241584120826006,3.16833006883652,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.302899349844443,0.15241361331,0.403304740547362,0.487289403698762,0.192423683280659,0.233753804363138,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,6.95976172215607,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.943131706930381,0.187283014939765,0.512201219238954,0.689225627467359,0,0.231768651889711,0.578727661391115,0.412085900803307,0,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0,0,0,0.429742108096597,0,0,0|short_description=p2@Gm11545}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217122 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TDT7 | |||
|association_with_transcript=222bp_to_ENSMUST00000100556,NM_001105561,uc007kzk.2_5end | |||
|cluster_id=chr11:94622249..94622273,- | |||
|description=CAGE_peak_2_at_Gm11545_5end | |||
|id=chr11:94622249..94622273,- | |||
|ontology_enrichment_celltype=CL:0002563!4.47e-09!9;CL:0002251!4.47e-09!9;CL:0000239!8.18e-07!6;CL:0000677!8.18e-07!6;CL:0000212!8.18e-07!6;CL:0000584!8.18e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.21e-18,9;CL:0002251,1.21e-18,9;CL:0000239,1.63e-13,6;CL:0000677,1.63e-13,6;CL:0000584,1.63e-13,6;CL:0000075,1.85e-11,7;CL:0000066,1.21e-10,25;CL:0002076,1.95e-10,15;CL:0000682,3.09e-08,3;CL:0000223,2.23e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.09e-17!59;UBERON:0000160!3.75e-16!43;UBERON:0000344!1.53e-14!15;UBERON:0004923!5.89e-13!24;UBERON:0001242!1.18e-12!13;UBERON:0000060!1.18e-12!13;UBERON:0001262!1.18e-12!13;UBERON:0004786!1.18e-12!13;UBERON:0004119!9.41e-11!130;UBERON:0000925!9.41e-11!130;UBERON:0006595!9.41e-11!130;UBERON:0001007!1.03e-10!128;UBERON:0001555!1.03e-10!128;UBERON:0007026!1.03e-10!128;UBERON:0004921!1.34e-09!126;UBERON:0004185!1.34e-09!126;UBERON:0003350!4.47e-09!9;UBERON:0004808!4.47e-09!9;UBERON:0001277!4.47e-09!9;UBERON:0000485!8.02e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.67e-49,31;UBERON:0005409,7.08e-37,47;UBERON:0000344,4.18e-31,15;UBERON:0001242,8.61e-27,13;UBERON:0001262,8.61e-27,13;UBERON:0004786,8.61e-27,13;UBERON:0004923,2.69e-20,24;UBERON:0003350,1.21e-18,9;UBERON:0004808,1.21e-18,9;UBERON:0001277,1.21e-18,9;UBERON:0000485,6.56e-15,11;UBERON:0001007,1.04e-12,116;UBERON:0001555,1.04e-12,116;UBERON:0007026,1.04e-12,116;UBERON:0004119,2.31e-12,118;UBERON:0000925,2.31e-12,118;UBERON:0006595,2.31e-12,118;UBERON:0004921,8.33e-11,114;UBERON:0002108,1.37e-09,4;UBERON:0000331,1.30e-07,3;UBERON:0002116,1.30e-07,3;UBERON:0001204,1.30e-07,3;UBERON:0001168,1.30e-07,3 | |||
|phase1_expression=0,27.9180326111489,30.0299497997094,13.3084252975005,13.5241847085514,12.9267039372155,14.4839837169226,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0,0,26.2387573381187,24.0879745120529,28.137366241636,32.7379117080897,41.8014191410625,19.7624356234629,11.8454160987167,27.9380443425684,0,0,0,6.93243887403059,8.47796691328311,7.75843553797003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0.148442139064825,0,0,0,0,0.117588707135705,0,1.23597483867187,0,0,0,0,0,0,0,0,20.4365644166873,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0.146199987425332,0,0,0,0,15.1992640172547,12.9580777665137,0.213288250535234,0,1.28867461322093,5.44545516483025,5.11469500843202,7.79925067061493,10.9141684155238,8.39964669092456,4.02136334080431,6.96347652144028,6.04388670069272,14.3811105384675,16.4264917904768,9.35963984295526,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.81931657357869,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.178065603667255,0.488660878060728,5.93892442701128,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,14.8655226681224,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.546776910884101,0,0.169978429993855,0,0,0,0,0.203319467126849,1.29606408986162,0.418176592028937,1.74690050996942,0,0.247960367176008,0,1.55537967950151,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.13020438484395,0,0.241584120826006,3.16833006883652,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.302899349844443,0.15241361331,0.403304740547362,0.487289403698762,0.192423683280659,0.233753804363138,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,6.95976172215607,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.943131706930381,0.187283014939765,0.512201219238954,0.689225627467359,0,0.231768651889711,0.578727661391115,0.412085900803307,0,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p2@Gm11545 | |||
}} |
Revision as of 08:59, 4 August 2015
Short description: | p2@Gm11545 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm11545_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 222bp_to_ENSMUST00000100556, NM_001105561, uc007kzk.2_5end |
EntrezGene: | 217122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.21e-18 | 9 |
epithelial cell of alimentary canal | 1.21e-18 | 9 |
brush border epithelial cell | 1.63e-13 | 6 |
gut absorptive cell | 1.63e-13 | 6 |
enterocyte | 1.63e-13 | 6 |
columnar/cuboidal epithelial cell | 1.85e-11 | 7 |
epithelial cell | 1.21e-10 | 25 |
endo-epithelial cell | 1.95e-10 | 15 |
M cell of gut | 3.09e-08 | 3 |
endodermal cell | 2.23e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.67e-49 | 31 |
gastrointestinal system | 7.08e-37 | 47 |
mucosa | 4.18e-31 | 15 |
intestinal mucosa | 8.61e-27 | 13 |
wall of intestine | 8.61e-27 | 13 |
gastrointestinal system mucosa | 8.61e-27 | 13 |
organ component layer | 2.69e-20 | 24 |
epithelium of mucosa | 1.21e-18 | 9 |
gastrointestinal system epithelium | 1.21e-18 | 9 |
intestinal epithelium | 1.21e-18 | 9 |
simple columnar epithelium | 6.56e-15 | 11 |
digestive system | 1.04e-12 | 116 |
digestive tract | 1.04e-12 | 116 |
primitive gut | 1.04e-12 | 116 |
endoderm-derived structure | 2.31e-12 | 118 |
endoderm | 2.31e-12 | 118 |
presumptive endoderm | 2.31e-12 | 118 |
subdivision of digestive tract | 8.33e-11 | 114 |
small intestine | 1.37e-09 | 4 |
ileal mucosa | 1.30e-07 | 3 |
ileum | 1.30e-07 | 3 |
mucosa of small intestine | 1.30e-07 | 3 |
wall of small intestine | 1.30e-07 | 3 |