FFCP PHASE1:Mm9::chr19:58530098..58530112,-: Difference between revisions
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{{FFCP|EntrezGene=14585|HGNC=|MCL_coexpression_id=2271|UniProt=P97785|association_with_transcript=-210bp_to_ENSMUST00000026076_5end|description=CAGE_peak_13_at_Gfra1_5end|id=chr19:58530098..58530112,-|ontology_enrichment_celltype=CL:0002319!6.75e-09!43;CL:0000221!1.86e-08!44;CL:0000133!1.86e-08!44;CL:0000107!1.44e-07!9;CL:0000055!3.87e-07!50;CL:0000540!7.84e-07!33;CL:0000047!7.84e-07!33;CL:0000031!7.84e-07!33;CL:0000404!7.84e-07!33|ontology_enrichment_celltype_v019_2=CL:0000107,3.39e-10,9;CL:0000217,6.99e-09,2;CL:0000328,6.99e-09,2;CL:0002573,6.99e-09,2;CL:0002376,6.99e-09,2;CL:0000218,6.99e-09,2;CL:0000692,6.99e-09,2;CL:0002377,6.99e-09,2;CL:0002375,6.99e-09,2;CL:0002611,2.30e-08,2;CL:0002319,5.82e-07,43;CL:0000221,9.15e-07,44;CL:0000133,9.15e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.05e-15!75;UBERON:0001016!2.05e-15!75;UBERON:0004121!2.86e-15!102;UBERON:0000924!2.86e-15!102;UBERON:0006601!2.86e-15!102;UBERON:0001017!5.65e-14!73;UBERON:0005743!5.65e-14!73;UBERON:0000010!2.44e-09!11;UBERON:0002346!5.69e-08!71;UBERON:0003075!5.69e-08!71;UBERON:0007284!5.69e-08!71;UBERON:0002410!1.44e-07!9;UBERON:0001049!2.58e-07!52;UBERON:0005068!2.58e-07!52;UBERON:0006241!2.58e-07!52;UBERON:0007135!2.58e-07!52;UBERON:0002020!8.45e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.22e-16,11;UBERON:0000011,1.33e-11,3;UBERON:0002410,3.39e-10,9;UBERON:0002256,2.30e-08,2;UBERON:0001016,4.81e-08,75;UBERON:0001896,6.18e-08,2;UBERON:0002298,6.18e-08,2;UBERON:0005290,6.18e-08,2;UBERON:0010096,6.18e-08,2;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.659058548203415,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,1.14260393761521,2.87129103237098,0,0,0,0,0.510749352340751,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,0,0.15279824777681,0.589257170947335,0.569486723196412,0.745597783301202,2.27178579999552,5.2144376473682,0,0,0,1.07940638327563,2.59910566979068,0.896053774194671,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0.323533699894818,0.662524555381181,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,0,0.347648640384553,1.27857728665165,1.0389402227978,0.648965052271031,0,1.7416975885413,2.27450482590307,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.512454881139399,0.281105173679186,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0.312037673114561,1.26289438973556,0.179397413521912,1.92977408545347,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,1.28440471990234,1.17211686592203,0.327869890753351,0.504941854408746,0.315508219416257,0.780877488593277,2.15423397732799,1.67278158566786,2.45078541490634,1.13230612315533,2.02405350837447,0.292255857911312,0.790575555893047,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.17230640686684,0.476293691283074,0,0.578727661391115,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,1.05227884575137,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p13@Gfra1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14585 | |||
|HGNC= | |||
|MCL_coexpression_id=2271 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97785 | |||
|association_with_transcript=-210bp_to_ENSMUST00000026076_5end | |||
|cluster_id=chr19:58530098..58530112,- | |||
|description=CAGE_peak_13_at_Gfra1_5end | |||
|id=chr19:58530098..58530112,- | |||
|ontology_enrichment_celltype=CL:0002319!6.75e-09!43;CL:0000221!1.86e-08!44;CL:0000133!1.86e-08!44;CL:0000107!1.44e-07!9;CL:0000055!3.87e-07!50;CL:0000540!7.84e-07!33;CL:0000047!7.84e-07!33;CL:0000031!7.84e-07!33;CL:0000404!7.84e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.39e-10,9;CL:0000217,6.99e-09,2;CL:0000328,6.99e-09,2;CL:0002573,6.99e-09,2;CL:0002376,6.99e-09,2;CL:0000218,6.99e-09,2;CL:0000692,6.99e-09,2;CL:0002377,6.99e-09,2;CL:0002375,6.99e-09,2;CL:0002611,2.30e-08,2;CL:0002319,5.82e-07,43;CL:0000221,9.15e-07,44;CL:0000133,9.15e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.05e-15!75;UBERON:0001016!2.05e-15!75;UBERON:0004121!2.86e-15!102;UBERON:0000924!2.86e-15!102;UBERON:0006601!2.86e-15!102;UBERON:0001017!5.65e-14!73;UBERON:0005743!5.65e-14!73;UBERON:0000010!2.44e-09!11;UBERON:0002346!5.69e-08!71;UBERON:0003075!5.69e-08!71;UBERON:0007284!5.69e-08!71;UBERON:0002410!1.44e-07!9;UBERON:0001049!2.58e-07!52;UBERON:0005068!2.58e-07!52;UBERON:0006241!2.58e-07!52;UBERON:0007135!2.58e-07!52;UBERON:0002020!8.45e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.22e-16,11;UBERON:0000011,1.33e-11,3;UBERON:0002410,3.39e-10,9;UBERON:0002256,2.30e-08,2;UBERON:0001016,4.81e-08,75;UBERON:0001896,6.18e-08,2;UBERON:0002298,6.18e-08,2;UBERON:0005290,6.18e-08,2;UBERON:0010096,6.18e-08,2;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.659058548203415,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,1.14260393761521,2.87129103237098,0,0,0,0,0.510749352340751,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,0,0.15279824777681,0.589257170947335,0.569486723196412,0.745597783301202,2.27178579999552,5.2144376473682,0,0,0,1.07940638327563,2.59910566979068,0.896053774194671,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0.323533699894818,0.662524555381181,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,0,0.347648640384553,1.27857728665165,1.0389402227978,0.648965052271031,0,1.7416975885413,2.27450482590307,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.512454881139399,0.281105173679186,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0.312037673114561,1.26289438973556,0.179397413521912,1.92977408545347,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,1.28440471990234,1.17211686592203,0.327869890753351,0.504941854408746,0.315508219416257,0.780877488593277,2.15423397732799,1.67278158566786,2.45078541490634,1.13230612315533,2.02405350837447,0.292255857911312,0.790575555893047,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0.537080087002444,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.280924522409647,0.192075457214608,0.17230640686684,0.476293691283074,0,0.578727661391115,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,1.05227884575137,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p13@Gfra1 | |||
}} |
Revision as of 10:42, 4 August 2015
Short description: | p13@Gfra1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Gfra1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2271 |
Association with transcript: | -210bp_to_ENSMUST00000026076_5end |
EntrezGene: | 14585 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.39e-10 | 9 |
insulating cell | 6.99e-09 | 2 |
myelin accumulating cell | 6.99e-09 | 2 |
Schwann cell | 6.99e-09 | 2 |
non-myelinating Schwann cell | 6.99e-09 | 2 |
myelinating Schwann cell;;Schwann cell | 6.99e-09 | 2 |
terminal Schwann cell | 6.99e-09 | 2 |
immature Schwann cell | 6.99e-09 | 2 |
Schwann cell precursor | 6.99e-09 | 2 |
neuron of the dorsal spinal cord | 2.30e-08 | 2 |
neural cell | 5.82e-07 | 43 |
ectodermal cell | 9.15e-07 | 44 |
neurectodermal cell | 9.15e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.22e-16 | 11 |
parasympathetic nervous system | 1.33e-11 | 3 |
autonomic nervous system | 3.39e-10 | 9 |
dorsal horn of spinal cord | 2.30e-08 | 2 |
nervous system | 4.81e-08 | 75 |
medulla oblongata | 6.18e-08 | 2 |
brainstem | 6.18e-08 | 2 |
myelencephalon | 6.18e-08 | 2 |
future myelencephalon | 6.18e-08 | 2 |
posterior neural tube | 2.36e-07 | 12 |
chordal neural plate | 2.36e-07 | 12 |