FFCP PHASE1:Mm9::chr2:163298372..163298404,-: Difference between revisions
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{{FFCP|EntrezGene=228859|HGNC=|MCL_coexpression_id=2337|UniProt=P59266|association_with_transcript=-7bp_to_ENSMUST00000109418,NM_173397,uc008nsv.1_5end|description=CAGE_peak_2_at_Fitm2_5end|id=chr2:163298372..163298404,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000333,9.56e-07,10;CL:0000095,9.56e-07,10;CL:0000243,9.56e-07,10;CL:0000123,9.56e-07,10;CL:0000125,9.56e-07,10;CL:0000030,9.56e-07,10;CL:0000339,9.56e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!9.22e-09!114;UBERON:0004121!1.58e-08!102;UBERON:0000924!1.58e-08!102;UBERON:0006601!1.58e-08!102;UBERON:0004111!7.14e-08!122;UBERON:0000073!8.95e-08!75;UBERON:0001016!8.95e-08!75;UBERON:0001017!5.45e-07!73;UBERON:0005743!5.45e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0000025,8.61e-09,114;UBERON:0004111,6.64e-08,122;UBERON:0001016,1.20e-07,75;UBERON:0010314,5.02e-07,92;UBERON:0004121,6.01e-07,95;UBERON:0000924,6.01e-07,95;UBERON:0006601,6.01e-07,95;UBERON:0001017,7.35e-07,73|phase1_expression=1.92178616525753,2.79180326111489,2.27499619694768,1.81478526784098,3.00537437967808,2.18243053485457,1.40167584357315,1.29123323441576,2.111830832275,1.63845168425395,1.36974374580404,2.79202556483677,0.684802919724823,0.699363219351979,0.333109761815663,0,0.699561878128147,1.26184866143295,1.09691546884591,0.84877930359606,2.21112554392781,0,0.522399578277871,0.799962113967033,1.60586496747019,1.14846392823004,1.29228598847722,2.15471232685889,1.71021077510736,0.252030129759931,1.77384408524244,2.54012269383853,1.23012957516914,0,0.577703239502549,0.831173226792462,1.02084678131185,0.418531630736908,0,0,0,0.683045484958446,0,1.00717454380462,0.811015449756117,2.56965453026354,6.25913075478431,3.48840250208714,3.29529274101708,3.4997381833371,4.61955191363696,5.75010257459886,0.503347818173209,0,0.336093799142464,1.28629718017973,1.71920063963254,3.6097046459421,2.22548106945558,2.11596391708813,0.633831403506179,3.38844532069132,7.11435836888911,0.899899717281399,0.988866362566974,0,4.49400165777607,6.53171119046643,2.38486108309499,0.675029691658453,1.89292465216244,2.28520787523043,3.53389665522582,1.71487118900936,1.62937300731002,0.919218786610021,4.40463523997555,4.34136949489638,4.14737639791857,1.97829431595291,1.55528994124096,3.12548022334056,5.02529398202486,3.37657566019008,3.81995619442025,0.883885756421003,2.42031857358475,2.23679334990361,8.40560745998343,4.00529268565963,0.869593466105033,0,3.39985666853875,3.2382191498269,5.19821133958135,7.6164570806547,2.80888840263504,1.1930122580464,1.29893002301434,3.88673531961374,1.26759077799012,2.56652954828636,0,7.11066703153331,3.030874574157,1.77351905832569,0,3.9964357901671,0.776813650941515,4.30482203287992,1.21439728736295,1.82679286987285,1.84492397804847,5.27529241934179,5.40908052824242,4.27266410520897,2.71914464507811,3.7595832799177,0.884610551949874,1.7794353494215,3.97514733228708,4.363877278217,1.86391761218122,2.04946557908083,3.56059401582874,0.766371165625774,0,0,0.254140454146129,2.09706895166752,0.457500602818626,2.01046963380583,2.43354048269187,1.79000820131231,3.1168206683934,4.38051410282946,1.32391173005411,2.73695335342205,0.505445516867349,2.10441855886474,0.910843100738926,1.83921683546778,0.360124259610698,1.20563854268572,1.08858398642125,1.0249097622788,0.843315521037559,1.29351685369508,1.94011193639558,0.189106080167819,1.05570674498369,1.53437012699302,1.66828349535359,2.089512999133,0.823128545631774,1.19420560091096,0,0.51469581422943,0.568326998791185,1.03562886267751,1.87620847984877,2.34080679899319,1.18372367792605,1.18058539048442,1.23413690309903,1.39520366850245,2.68273401399619,3.50296027101508,3.45575684818309,6.7308660272429,16.294830718717,17.8363984658905,10.7579556492615,16.3731830887654,1.68231958851302,2.26390147234426,1.98251269790279,2.11560453330835,0.853153002140936,0.696710015581316,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.58489226135736,0.898819408654221,1.72910439899755,0.995706366271836,2.0863469104839,1.25673363870702,2.25415471346161,1.01825663922657,1.55161989734101,1.33258057791605,1.13825766823663,1.62371162777562,0.627994911365499,2.09775178667061,5.03969466048153,0.333690211432188,2.35870794135844,2.02375901146368,0.608580364165509,1.4470629585145,2.03700681425136,2.01387296215567,9.72811360650212,2.47105271869273,1.43768206527355,8.18710084870708,5.92871578917665,2.27320990152401,1.79397413521912,3.85954817090694,2.40179147216586,1.70542270593436,1.30371981153621,1.18821560042632,0.469380496577004,1.50755631697634,1.6663054862021,3.51240566144038,0.315270288212382,0.8858587585951,1.43509291791738,2.45794972073607,1.55416483679306,3.03763023021174,0,0,1.96705709207614,2.48343071674259,4.33486592967038,3.98519734413491,0.983609672260053,6.81671503451807,1.57754109708128,1.17131623288992,2.15423397732799,1.43381278771531,2.22798674082394,0.84922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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:228859 | |||
|HGNC= | |||
|MCL_coexpression_id=2337 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P59266 | |||
|association_with_transcript=-7bp_to_ENSMUST00000109418,NM_173397,uc008nsv.1_5end | |||
|cluster_id=chr2:163298372..163298404,- | |||
|description=CAGE_peak_2_at_Fitm2_5end | |||
|id=chr2:163298372..163298404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.56e-07,10;CL:0000095,9.56e-07,10;CL:0000243,9.56e-07,10;CL:0000123,9.56e-07,10;CL:0000125,9.56e-07,10;CL:0000030,9.56e-07,10;CL:0000339,9.56e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!9.22e-09!114;UBERON:0004121!1.58e-08!102;UBERON:0000924!1.58e-08!102;UBERON:0006601!1.58e-08!102;UBERON:0004111!7.14e-08!122;UBERON:0000073!8.95e-08!75;UBERON:0001016!8.95e-08!75;UBERON:0001017!5.45e-07!73;UBERON:0005743!5.45e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,8.61e-09,114;UBERON:0004111,6.64e-08,122;UBERON:0001016,1.20e-07,75;UBERON:0010314,5.02e-07,92;UBERON:0004121,6.01e-07,95;UBERON:0000924,6.01e-07,95;UBERON:0006601,6.01e-07,95;UBERON:0001017,7.35e-07,73 | |||
|phase1_expression=1.92178616525753,2.79180326111489,2.27499619694768,1.81478526784098,3.00537437967808,2.18243053485457,1.40167584357315,1.29123323441576,2.111830832275,1.63845168425395,1.36974374580404,2.79202556483677,0.684802919724823,0.699363219351979,0.333109761815663,0,0.699561878128147,1.26184866143295,1.09691546884591,0.84877930359606,2.21112554392781,0,0.522399578277871,0.799962113967033,1.60586496747019,1.14846392823004,1.29228598847722,2.15471232685889,1.71021077510736,0.252030129759931,1.77384408524244,2.54012269383853,1.23012957516914,0,0.577703239502549,0.831173226792462,1.02084678131185,0.418531630736908,0,0,0,0.683045484958446,0,1.00717454380462,0.811015449756117,2.56965453026354,6.25913075478431,3.48840250208714,3.29529274101708,3.4997381833371,4.61955191363696,5.75010257459886,0.503347818173209,0,0.336093799142464,1.28629718017973,1.71920063963254,3.6097046459421,2.22548106945558,2.11596391708813,0.633831403506179,3.38844532069132,7.11435836888911,0.899899717281399,0.988866362566974,0,4.49400165777607,6.53171119046643,2.38486108309499,0.675029691658453,1.89292465216244,2.28520787523043,3.53389665522582,1.71487118900936,1.62937300731002,0.919218786610021,4.40463523997555,4.34136949489638,4.14737639791857,1.97829431595291,1.55528994124096,3.12548022334056,5.02529398202486,3.37657566019008,3.81995619442025,0.883885756421003,2.42031857358475,2.23679334990361,8.40560745998343,4.00529268565963,0.869593466105033,0,3.39985666853875,3.2382191498269,5.19821133958135,7.6164570806547,2.80888840263504,1.1930122580464,1.29893002301434,3.88673531961374,1.26759077799012,2.56652954828636,0,7.11066703153331,3.030874574157,1.77351905832569,0,3.9964357901671,0.776813650941515,4.30482203287992,1.21439728736295,1.82679286987285,1.84492397804847,5.27529241934179,5.40908052824242,4.27266410520897,2.71914464507811,3.7595832799177,0.884610551949874,1.7794353494215,3.97514733228708,4.363877278217,1.86391761218122,2.04946557908083,3.56059401582874,0.766371165625774,0,0,0.254140454146129,2.09706895166752,0.457500602818626,2.01046963380583,2.43354048269187,1.79000820131231,3.1168206683934,4.38051410282946,1.32391173005411,2.73695335342205,0.505445516867349,2.10441855886474,0.910843100738926,1.83921683546778,0.360124259610698,1.20563854268572,1.08858398642125,1.0249097622788,0.843315521037559,1.29351685369508,1.94011193639558,0.189106080167819,1.05570674498369,1.53437012699302,1.66828349535359,2.089512999133,0.823128545631774,1.19420560091096,0,0.51469581422943,0.568326998791185,1.03562886267751,1.87620847984877,2.34080679899319,1.18372367792605,1.18058539048442,1.23413690309903,1.39520366850245,2.68273401399619,3.50296027101508,3.45575684818309,6.7308660272429,16.294830718717,17.8363984658905,10.7579556492615,16.3731830887654,1.68231958851302,2.26390147234426,1.98251269790279,2.11560453330835,0.853153002140936,0.696710015581316,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.58489226135736,0.898819408654221,1.72910439899755,0.995706366271836,2.0863469104839,1.25673363870702,2.25415471346161,1.01825663922657,1.55161989734101,1.33258057791605,1.13825766823663,1.62371162777562,0.627994911365499,2.09775178667061,5.03969466048153,0.333690211432188,2.35870794135844,2.02375901146368,0.608580364165509,1.4470629585145,2.03700681425136,2.01387296215567,9.72811360650212,2.47105271869273,1.43768206527355,8.18710084870708,5.92871578917665,2.27320990152401,1.79397413521912,3.85954817090694,2.40179147216586,1.70542270593436,1.30371981153621,1.18821560042632,0.469380496577004,1.50755631697634,1.6663054862021,3.51240566144038,0.315270288212382,0.8858587585951,1.43509291791738,2.45794972073607,1.55416483679306,3.03763023021174,0,0,1.96705709207614,2.48343071674259,4.33486592967038,3.98519734413491,0.983609672260053,6.81671503451807,1.57754109708128,1.17131623288992,2.15423397732799,1.43381278771531,2.22798674082394,0.849229592366497,0.404810701674894,2.33804686329049,2.37172666767914,1.28528526568723,2.55492153374884,1.24645922567079,0.81443479676788,2.3095817216155,2.65490276679926,0.728341908464944,2.72091201268276,1.88605079755898,2.06711325016541,2.76691633149535,1.55056975900933,1.45413491791002,1.78248689192361,0.316036757935816,1.05418608574999,2.06271086496374,1.70219802876894,0.720244376125241,1.81102157295856,1.50035924522115,1.59606210278046,1.78368817602071,1.97458824722545,2.74018454203139,3.05073220482823,0.847328283455281,0.661585194164886,1.6488625294148,2.42196640043858,2.89502039655148,2.02932984805332,1.64140899745061,2.33184669303881,4.26478194624172,0.512612642393558,1.44470807574256,0.555583582109135,1.13021074202815,0.820165366326151,0.457556346413045,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,1.10717597753397,2.23651413839534,0.972048067396211,1.46361807210128,1.09181281873089,0.944050424693745,1.57041565878138,1.04702376793612,2.59229946583586,1.86401793926078,0,1.79419855252775,0.8272924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| |||
|short_description=p2@Fitm2 | |||
}} |
Revision as of 11:18, 4 August 2015
Short description: | p2@Fitm2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fitm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2337 |
Association with transcript: | -7bp_to_ENSMUST00000109418, NM_173397, uc008nsv.1_5end |
EntrezGene: | 228859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 9.56e-07 | 10 |
neuron associated cell | 9.56e-07 | 10 |
glial cell (sensu Vertebrata) | 9.56e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.56e-07 | 10 |
glial cell | 9.56e-07 | 10 |
glioblast | 9.56e-07 | 10 |
glioblast (sensu Vertebrata) | 9.56e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
tube | 8.61e-09 | 114 |
anatomical conduit | 6.64e-08 | 122 |
nervous system | 1.20e-07 | 75 |
structure with developmental contribution from neural crest | 5.02e-07 | 92 |
ectoderm-derived structure | 6.01e-07 | 95 |
ectoderm | 6.01e-07 | 95 |
presumptive ectoderm | 6.01e-07 | 95 |
central nervous system | 7.35e-07 | 73 |