FFCP PHASE1:Mm9::chr11:98562656..98562660,+: Difference between revisions
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{{FFCP|EntrezGene=12985|HGNC=|MCL_coexpression_id=197|UniProt=P09920,Q0VB73|association_with_transcript=29bp_to_NM_009971,uc007lgy.1_5end|description=CAGE_peak_1_at_Csf3_5end|id=chr11:98562656..98562660,+|ontology_enrichment_celltype=CL:0000068!1.21e-09!3;CL:0002202!1.21e-09!3;CL:0000069!1.21e-09!3;CL:0002632!1.21e-09!3;CL:0002368!1.21e-09!3;CL:0000307!1.21e-09!3;CL:0000377!1.21e-09!3;CL:0000215!1.26e-08!3|ontology_enrichment_celltype_v019_2=CL:0000068,2.89e-30,3;CL:0002202,2.89e-30,3;CL:0000069,2.89e-30,3;CL:0002632,2.89e-30,3;CL:0002368,2.89e-30,3;CL:0000307,2.89e-30,3;CL:0000377,2.89e-30,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!1.21e-09!3;UBERON:0001005!1.21e-09!3;UBERON:0007196!1.21e-09!3;UBERON:0001558!1.21e-09!3;UBERON:0000474!6.09e-08!9;UBERON:0004175!1.47e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.89e-30,3;UBERON:0001005,2.89e-30,3;UBERON:0007196,2.89e-30,3;UBERON:0001558,2.89e-30,3;UBERON:0003975,2.64e-18,5;UBERON:0000474,9.45e-18,9;UBERON:0003100,1.32e-14,11;UBERON:0003134,1.05e-11,8;UBERON:0000996,3.65e-11,1;UBERON:0000993,5.74e-11,1;UBERON:0000029,7.19e-11,1;UBERON:0001097,7.19e-11,1;UBERON:0003968,7.19e-11,1;UBERON:0001467,7.19e-11,1;UBERON:0006834,8.99e-11,1;UBERON:0005795,9.05e-11,4;UBERON:0000995,9.05e-11,4;UBERON:0004175,1.79e-10,9|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49473123033642,5.82727690592727,7.07734223020697,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,3.79431282836832,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,1.12609485270709,41.3922670844019,6.00231461421384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p1@Csf3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12985 | |||
|HGNC= | |||
|MCL_coexpression_id=197 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P09920,uniprot:Q0VB73 | |||
|association_with_transcript=29bp_to_NM_009971,uc007lgy.1_5end | |||
|cluster_id=chr11:98562656..98562660,+ | |||
|description=CAGE_peak_1_at_Csf3_5end | |||
|id=chr11:98562656..98562660,+ | |||
|ontology_enrichment_celltype=CL:0000068!1.21e-09!3;CL:0002202!1.21e-09!3;CL:0000069!1.21e-09!3;CL:0002632!1.21e-09!3;CL:0002368!1.21e-09!3;CL:0000307!1.21e-09!3;CL:0000377!1.21e-09!3;CL:0000215!1.26e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.89e-30,3;CL:0002202,2.89e-30,3;CL:0000069,2.89e-30,3;CL:0002632,2.89e-30,3;CL:0002368,2.89e-30,3;CL:0000307,2.89e-30,3;CL:0000377,2.89e-30,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!1.21e-09!3;UBERON:0001005!1.21e-09!3;UBERON:0007196!1.21e-09!3;UBERON:0001558!1.21e-09!3;UBERON:0000474!6.09e-08!9;UBERON:0004175!1.47e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.89e-30,3;UBERON:0001005,2.89e-30,3;UBERON:0007196,2.89e-30,3;UBERON:0001558,2.89e-30,3;UBERON:0003975,2.64e-18,5;UBERON:0000474,9.45e-18,9;UBERON:0003100,1.32e-14,11;UBERON:0003134,1.05e-11,8;UBERON:0000996,3.65e-11,1;UBERON:0000993,5.74e-11,1;UBERON:0000029,7.19e-11,1;UBERON:0001097,7.19e-11,1;UBERON:0003968,7.19e-11,1;UBERON:0001467,7.19e-11,1;UBERON:0006834,8.99e-11,1;UBERON:0005795,9.05e-11,4;UBERON:0000995,9.05e-11,4;UBERON:0004175,1.79e-10,9 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49473123033642,5.82727690592727,7.07734223020697,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,3.79431282836832,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,1.12609485270709,41.3922670844019,6.00231461421384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p1@Csf3 | |||
}} |
Revision as of 12:38, 4 August 2015
Short description: | p1@Csf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Csf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:197 |
Association with transcript: | 29bp_to_NM_009971, uc007lgy.1_5end |
EntrezGene: | 12985 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.89e-30 | 3 |
epithelial cell of tracheobronchial tree | 2.89e-30 | 3 |
branched duct epithelial cell | 2.89e-30 | 3 |
epithelial cell of lower respiratory tract | 2.89e-30 | 3 |
respiratory epithelial cell | 2.89e-30 | 3 |
tracheal epithelial cell | 2.89e-30 | 3 |
tracheoblast | 2.89e-30 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.89e-30 | 3 |
respiratory airway | 2.89e-30 | 3 |
tracheobronchial tree | 2.89e-30 | 3 |
lower respiratory tract | 2.89e-30 | 3 |
internal female genitalia | 2.64e-18 | 5 |
female reproductive system | 9.45e-18 | 9 |
female organism | 1.32e-14 | 11 |
female reproductive organ | 1.05e-11 | 8 |
vagina | 3.65e-11 | 1 |
oviduct | 5.74e-11 | 1 |
lymph node | 7.19e-11 | 1 |
axillary lymph node | 7.19e-11 | 1 |
peripheral lymph node | 7.19e-11 | 1 |
shoulder | 7.19e-11 | 1 |
uterus or analog | 8.99e-11 | 1 |
embryonic uterus | 9.05e-11 | 4 |
uterus | 9.05e-11 | 4 |
internal genitalia | 1.79e-10 | 9 |