FFCP PHASE1:Mm9::chr9:107507434..107507453,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=946|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:107507434..107507453,-|id=chr9:107507434..107507453,-|ontology_enrichment_celltype=CL:0002563!4.84e-07!9;CL:0002251!4.84e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.64e-13,9;CL:0002251,1.64e-13,9;CL:0000075,1.95e-10,7;CL:0000239,2.66e-09,6;CL:0000677,2.66e-09,6;CL:0000584,2.66e-09,6;CL:0000107,5.61e-08,9;CL:0002321,1.55e-07,70;CL:0002076,2.74e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.89e-10!15;UBERON:0000160!6.58e-10!43;UBERON:0001242!2.51e-09!13;UBERON:0000060!2.51e-09!13;UBERON:0001262!2.51e-09!13;UBERON:0004786!2.51e-09!13;UBERON:0005409!3.12e-08!59;UBERON:0000485!1.05e-07!11;UBERON:0003350!4.84e-07!9;UBERON:0004808!4.84e-07!9;UBERON:0001277!4.84e-07!9;UBERON:0000010!7.35e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.81e-30,31;UBERON:0000344,2.15e-18,15;UBERON:0005409,3.99e-17,47;UBERON:0001242,2.51e-16,13;UBERON:0001262,2.51e-16,13;UBERON:0004786,2.51e-16,13;UBERON:0003350,1.64e-13,9;UBERON:0004808,1.64e-13,9;UBERON:0001277,1.64e-13,9;UBERON:0000485,4.26e-13,11;UBERON:0000010,1.20e-10,11;UBERON:0004923,4.52e-10,24;UBERON:0002410,5.61e-08,9|phase1_expression=0.640595388419176,2.79180326111489,2.27499619694768,4.53696316960245,2.50447864973174,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.43993180514066,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,2.85035129184561,0.756090389279792,2.21730510655305,0,0,0,1.73310971850765,3.15845826181135,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,1.1665793944457,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,0.571301968807607,1.32521124570968,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.916789486660861,2.06240009831567,0.427115042397309,0.186399445825301,3.10477392666055,2.41828992341714,0,0,0,0,0,0,0.842666520790511,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0,1.1418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0.969750506270444,0,0.292780797011547,0,2.81002760729451,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0.497627882440372,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,1.05493372485001,0.680364991513279,0.2562274405697,0.843315521037559,0.258703370739016,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,1.02891068203972,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.102904612379284,6.27795687669216,2.64450566663544,0,0,1.28867461322093,3.63030344322017,1.55664630691409,2.47293313946327,2.84717436926707,2.14108641141214,2.26201687920243,1.39269530428806,0.974820435595601,2.69645822596266,2.59365659849633,2.19055400579804,0.758671603812327,0.342745537829186,1.1270773567308,1.4255592949172,2.52138233317913,1.96380295692892,4.04713837595247,3.98547399544926,4.39596437955849,5.92306386824642,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.469380496577004,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0.390438744296638,1.29254038639679,2.86762557543062,3.56477878531831,3.67999490025482,2.02405350837447,1.16902343164525,2.37172666767914,0,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0.322928853391811,0.301564624640779,0.358117032009409,0.820704498725306,2.91480836629851,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0,0.540026704109006,0,0.655087691238533,0.269728692769641,0.41326727862668,0.785267825952089,0.388844919875379,0,0,0.299033092087958,0,0,0,0,0.352071715937262,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.750729901804728,0.73260649706906,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0.972426868273176,0,0.183843508450014,0.666740183404846,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.655490552289177,0.512201219238954,0.229741875822453,0,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,1.31534855718921,0.679020569229309,1.12228454331548,0.355905054372522,0.492522411877817,0,0.154936841185966,0.964533054905707,0.749431733813838,0.233931608445408,0,0,1.76473135295612,0.695603506861264|short_description=p@chr9:107507434..107507453,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=946 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:107507434..107507453,- | |||
|description=CAGE_peak_at_chr9:107507434..107507453,- | |||
|id=chr9:107507434..107507453,- | |||
|ontology_enrichment_celltype=CL:0002563!4.84e-07!9;CL:0002251!4.84e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.64e-13,9;CL:0002251,1.64e-13,9;CL:0000075,1.95e-10,7;CL:0000239,2.66e-09,6;CL:0000677,2.66e-09,6;CL:0000584,2.66e-09,6;CL:0000107,5.61e-08,9;CL:0002321,1.55e-07,70;CL:0002076,2.74e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.89e-10!15;UBERON:0000160!6.58e-10!43;UBERON:0001242!2.51e-09!13;UBERON:0000060!2.51e-09!13;UBERON:0001262!2.51e-09!13;UBERON:0004786!2.51e-09!13;UBERON:0005409!3.12e-08!59;UBERON:0000485!1.05e-07!11;UBERON:0003350!4.84e-07!9;UBERON:0004808!4.84e-07!9;UBERON:0001277!4.84e-07!9;UBERON:0000010!7.35e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.81e-30,31;UBERON:0000344,2.15e-18,15;UBERON:0005409,3.99e-17,47;UBERON:0001242,2.51e-16,13;UBERON:0001262,2.51e-16,13;UBERON:0004786,2.51e-16,13;UBERON:0003350,1.64e-13,9;UBERON:0004808,1.64e-13,9;UBERON:0001277,1.64e-13,9;UBERON:0000485,4.26e-13,11;UBERON:0000010,1.20e-10,11;UBERON:0004923,4.52e-10,24;UBERON:0002410,5.61e-08,9 | |||
|phase1_expression=0.640595388419176,2.79180326111489,2.27499619694768,4.53696316960245,2.50447864973174,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.43993180514066,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,2.85035129184561,0.756090389279792,2.21730510655305,0,0,0,1.73310971850765,3.15845826181135,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,1.1665793944457,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,0.571301968807607,1.32521124570968,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.916789486660861,2.06240009831567,0.427115042397309,0.186399445825301,3.10477392666055,2.41828992341714,0,0,0,0,0,0,0.842666520790511,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0,1.1418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0.969750506270444,0,0.292780797011547,0,2.81002760729451,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0.497627882440372,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0.360124259610698,1.05493372485001,0.680364991513279,0.2562274405697,0.843315521037559,0.258703370739016,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,1.02891068203972,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.102904612379284,6.27795687669216,2.64450566663544,0,0,1.28867461322093,3.63030344322017,1.55664630691409,2.47293313946327,2.84717436926707,2.14108641141214,2.26201687920243,1.39269530428806,0.974820435595601,2.69645822596266,2.59365659849633,2.19055400579804,0.758671603812327,0.342745537829186,1.1270773567308,1.4255592949172,2.52138233317913,1.96380295692892,4.04713837595247,3.98547399544926,4.39596437955849,5.92306386824642,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.469380496577004,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0.390438744296638,1.29254038639679,2.86762557543062,3.56477878531831,3.67999490025482,2.02405350837447,1.16902343164525,2.37172666767914,0,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0.322928853391811,0.301564624640779,0.358117032009409,0.820704498725306,2.91480836629851,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0,0.540026704109006,0,0.655087691238533,0.269728692769641,0.41326727862668,0.785267825952089,0.388844919875379,0,0,0.299033092087958,0,0,0,0,0.352071715937262,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.750729901804728,0.73260649706906,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0.972426868273176,0,0.183843508450014,0.666740183404846,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.655490552289177,0.512201219238954,0.229741875822453,0,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,1.31534855718921,0.679020569229309,1.12228454331548,0.355905054372522,0.492522411877817,0,0.154936841185966,0.964533054905707,0.749431733813838,0.233931608445408,0,0,1.76473135295612,0.695603506861264 | |||
|short_description=p@chr9:107507434..107507453,- | |||
}} |
Latest revision as of 12:51, 4 August 2015
Short description: | p@chr9:107507434..107507453, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:107507434..107507453, - |
Coexpression cluster: | MCL_coexpression_mm9:946 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.64e-13 | 9 |
epithelial cell of alimentary canal | 1.64e-13 | 9 |
columnar/cuboidal epithelial cell | 1.95e-10 | 7 |
brush border epithelial cell | 2.66e-09 | 6 |
gut absorptive cell | 2.66e-09 | 6 |
enterocyte | 2.66e-09 | 6 |
autonomic neuron | 5.61e-08 | 9 |
embryonic cell | 1.55e-07 | 70 |
endo-epithelial cell | 2.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.81e-30 | 31 |
mucosa | 2.15e-18 | 15 |
gastrointestinal system | 3.99e-17 | 47 |
intestinal mucosa | 2.51e-16 | 13 |
wall of intestine | 2.51e-16 | 13 |
gastrointestinal system mucosa | 2.51e-16 | 13 |
epithelium of mucosa | 1.64e-13 | 9 |
gastrointestinal system epithelium | 1.64e-13 | 9 |
intestinal epithelium | 1.64e-13 | 9 |
simple columnar epithelium | 4.26e-13 | 11 |
peripheral nervous system | 1.20e-10 | 11 |
organ component layer | 4.52e-10 | 24 |
autonomic nervous system | 5.61e-08 | 9 |