FFCP PHASE1:Mm9::chr7:148888479..148888500,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148888479..148888500,+|id=chr7:148888479..148888500,+|ontology_enrichment_celltype=CL:0000473!6.48e-07!3;CL:0000627!6.48e-07!3;CL:0000682!6.48e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,5.25e-10,3;CL:0000239,6.54e-09,6;CL:0000677,6.54e-09,6;CL:0000584,6.54e-09,6;CL:0000075,1.19e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.41e-24!43;UBERON:0005409!5.13e-19!59;UBERON:0000344!1.03e-15!15;UBERON:0001242!3.56e-12!13;UBERON:0000060!3.56e-12!13;UBERON:0001262!3.56e-12!13;UBERON:0004786!3.56e-12!13;UBERON:0004923!7.17e-09!24;UBERON:0000331!1.26e-07!3;UBERON:0002116!1.26e-07!3;UBERON:0001204!1.26e-07!3;UBERON:0001168!1.26e-07!3;UBERON:0001007!1.88e-07!128;UBERON:0001555!1.88e-07!128;UBERON:0007026!1.88e-07!128;UBERON:0004119!3.13e-07!130;UBERON:0000925!3.13e-07!130;UBERON:0006595!3.13e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-44,31;UBERON:0005409,6.61e-31,47;UBERON:0000344,1.13e-20,15;UBERON:0001242,2.44e-15,13;UBERON:0001262,2.44e-15,13;UBERON:0004786,2.44e-15,13;UBERON:0002108,3.38e-14,4;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0004119,2.75e-12,118;UBERON:0000925,2.75e-12,118;UBERON:0006595,2.75e-12,118;UBERON:0004923,2.89e-12,24;UBERON:0000331,4.04e-11,3;UBERON:0002116,4.04e-11,3;UBERON:0001204,4.04e-11,3;UBERON:0001168,4.04e-11,3;UBERON:0004921,2.81e-10,114;UBERON:0001155,3.56e-08,2;UBERON:0000059,3.56e-08,2;UBERON:0001962,9.13e-08,2;UBERON:0001961,9.13e-08,2;UBERON:0001744,9.13e-08,2|phase1_expression=0,0,1.36499771816861,0,1.50268718983904,5.37213670118047,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,5.73523202667925,1.14846392823004,2.58457197695445,4.74036711908956,19.5724122040065,6.04872311423834,3.54768817048488,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,5.02456076660734,0,0,0,0.403367049246685,0.444756087689741,1.71203063501303,3.79623249235609,3.62337700392824,2.76468729680296,2.58643413653496,1.9496408711912,17.0775687644302,22.4783571869682,14.3381716743144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,7.12882353104861,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr7:148888479..148888500,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:148888479..148888500,+ | |||
|description=CAGE_peak_at_chr7:148888479..148888500,+ | |||
|id=chr7:148888479..148888500,+ | |||
|ontology_enrichment_celltype=CL:0000473!6.48e-07!3;CL:0000627!6.48e-07!3;CL:0000682!6.48e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.25e-10,3;CL:0000239,6.54e-09,6;CL:0000677,6.54e-09,6;CL:0000584,6.54e-09,6;CL:0000075,1.19e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.41e-24!43;UBERON:0005409!5.13e-19!59;UBERON:0000344!1.03e-15!15;UBERON:0001242!3.56e-12!13;UBERON:0000060!3.56e-12!13;UBERON:0001262!3.56e-12!13;UBERON:0004786!3.56e-12!13;UBERON:0004923!7.17e-09!24;UBERON:0000331!1.26e-07!3;UBERON:0002116!1.26e-07!3;UBERON:0001204!1.26e-07!3;UBERON:0001168!1.26e-07!3;UBERON:0001007!1.88e-07!128;UBERON:0001555!1.88e-07!128;UBERON:0007026!1.88e-07!128;UBERON:0004119!3.13e-07!130;UBERON:0000925!3.13e-07!130;UBERON:0006595!3.13e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-44,31;UBERON:0005409,6.61e-31,47;UBERON:0000344,1.13e-20,15;UBERON:0001242,2.44e-15,13;UBERON:0001262,2.44e-15,13;UBERON:0004786,2.44e-15,13;UBERON:0002108,3.38e-14,4;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0004119,2.75e-12,118;UBERON:0000925,2.75e-12,118;UBERON:0006595,2.75e-12,118;UBERON:0004923,2.89e-12,24;UBERON:0000331,4.04e-11,3;UBERON:0002116,4.04e-11,3;UBERON:0001204,4.04e-11,3;UBERON:0001168,4.04e-11,3;UBERON:0004921,2.81e-10,114;UBERON:0001155,3.56e-08,2;UBERON:0000059,3.56e-08,2;UBERON:0001962,9.13e-08,2;UBERON:0001961,9.13e-08,2;UBERON:0001744,9.13e-08,2 | |||
|phase1_expression=0,0,1.36499771816861,0,1.50268718983904,5.37213670118047,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,5.73523202667925,1.14846392823004,2.58457197695445,4.74036711908956,19.5724122040065,6.04872311423834,3.54768817048488,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,5.02456076660734,0,0,0,0.403367049246685,0.444756087689741,1.71203063501303,3.79623249235609,3.62337700392824,2.76468729680296,2.58643413653496,1.9496408711912,17.0775687644302,22.4783571869682,14.3381716743144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,7.12882353104861,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:148888479..148888500,+ | |||
}} |
Latest revision as of 13:17, 4 August 2015
Short description: | p@chr7:148888479..148888500, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148888479..148888500, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.25e-10 | 3 |
brush border epithelial cell | 6.54e-09 | 6 |
gut absorptive cell | 6.54e-09 | 6 |
enterocyte | 6.54e-09 | 6 |
columnar/cuboidal epithelial cell | 1.19e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.41e-44 | 31 |
gastrointestinal system | 6.61e-31 | 47 |
mucosa | 1.13e-20 | 15 |
intestinal mucosa | 2.44e-15 | 13 |
wall of intestine | 2.44e-15 | 13 |
gastrointestinal system mucosa | 2.44e-15 | 13 |
small intestine | 3.38e-14 | 4 |
digestive system | 1.41e-12 | 116 |
digestive tract | 1.41e-12 | 116 |
primitive gut | 1.41e-12 | 116 |
endoderm-derived structure | 2.75e-12 | 118 |
endoderm | 2.75e-12 | 118 |
presumptive endoderm | 2.75e-12 | 118 |
organ component layer | 2.89e-12 | 24 |
ileal mucosa | 4.04e-11 | 3 |
ileum | 4.04e-11 | 3 |
mucosa of small intestine | 4.04e-11 | 3 |
wall of small intestine | 4.04e-11 | 3 |
subdivision of digestive tract | 2.81e-10 | 114 |
colon | 3.56e-08 | 2 |
large intestine | 3.56e-08 | 2 |
gut-associated lymphoid tissue | 9.13e-08 | 2 |
mucosa-associated lymphoid tissue | 9.13e-08 | 2 |
lymphoid tissue | 9.13e-08 | 2 |