FFCP PHASE1:Mm9::chr7:148890317..148890367,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148890317..148890367,+|id=chr7:148890317..148890367,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-10,6;CL:0000677,2.60e-10,6;CL:0000584,2.60e-10,6;CL:0002563,1.01e-08,9;CL:0002251,1.01e-08,9;CL:0000075,1.02e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.60e-14!59;UBERON:0000160!2.04e-12!43;UBERON:0000344!1.10e-10!15;UBERON:0001242!3.30e-09!13;UBERON:0000060!3.30e-09!13;UBERON:0001262!3.30e-09!13;UBERON:0004786!3.30e-09!13;UBERON:0004923!4.32e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.63e-36,31;UBERON:0005409,1.97e-27,47;UBERON:0000344,2.66e-18,15;UBERON:0001242,4.66e-15,13;UBERON:0001262,4.66e-15,13;UBERON:0004786,4.66e-15,13;UBERON:0004923,3.42e-10,24;UBERON:0003350,1.01e-08,9;UBERON:0004808,1.01e-08,9;UBERON:0001277,1.01e-08,9;UBERON:0002108,2.47e-08,4;UBERON:0001007,4.50e-08,116;UBERON:0001555,4.50e-08,116;UBERON:0007026,4.50e-08,116;UBERON:0004119,8.35e-08,118;UBERON:0000925,8.35e-08,118;UBERON:0006595,8.35e-08,118;UBERON:0000485,6.27e-07,11;UBERON:0004921,8.99e-07,114|phase1_expression=0,5.23463111459042,4.54999239389536,3.62957053568196,2.50447864973174,75.5456723603504,111.666842204661,0,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,92.1556355290023,84.1932061516514,4.59385571292016,24.9841957772263,46.9727287255238,223.467541280696,52.9263272495855,62.5280040047959,0,0,0,0.288851619751275,1.99481574430191,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3928870897496,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,18.954524033364,0,0,0,0,0.230615497256059,0,0.117588707135705,0.502666365318702,0,0.144599356919912,0,0.808834249737046,0.441683036920787,0.484875253135222,370.919604824063,0,0,202.321987725204,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0,0.505445516867349,0,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0,0,0.465067889500816,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0.102904612379284,113.664061346427,115.035996498642,0,0.232236671860439,0.644337306610467,8.87407508342707,20.4587800337281,32.1481308130225,158.967235617411,84.8199616828656,97.5180610145046,61.4775498607156,59.2690824842125,214.817838668359,796.252575738374,457.228363392027,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,3.35956781118687,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0,0.119372344003136,1.47726809770555,158.857055963269,0.370850604021019,0.170870880797853,0,0,0.565105371014073,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,1.72808545314882,0.627264888043406,1.52853794622324,0.674321731924103,0.826534557253359,0,201.810513415322,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.888986911206461,0.618105171716683,0.962757628775446,1.01078884705519,0.50695859978048,1.13175804831646,0.842773567228942,0.89635213366817,0.861532034334199,1.90517476513229,1.27472758539341,1.35036454324594,1.23625770240992,0.588795680537589,1.71434626192708,0.887379030796687,1.1921809497366,1.0174249164263,0.846984423737976,1.26921911837515,0.548783918618318,1.31534855718921,0.814824683075171,0.561142271657738,0.711810108745045,0.886540341380071,2.45538625901814,0.619747364743864,0.964533054905707,0,2.57324769289949,3.00819475667618,2.29545998482612,0,0.231867835620421|short_description=p@chr7:148890317..148890367,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:148890317..148890367,+ | |||
|description=CAGE_peak_at_chr7:148890317..148890367,+ | |||
|id=chr7:148890317..148890367,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-10,6;CL:0000677,2.60e-10,6;CL:0000584,2.60e-10,6;CL:0002563,1.01e-08,9;CL:0002251,1.01e-08,9;CL:0000075,1.02e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.60e-14!59;UBERON:0000160!2.04e-12!43;UBERON:0000344!1.10e-10!15;UBERON:0001242!3.30e-09!13;UBERON:0000060!3.30e-09!13;UBERON:0001262!3.30e-09!13;UBERON:0004786!3.30e-09!13;UBERON:0004923!4.32e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.63e-36,31;UBERON:0005409,1.97e-27,47;UBERON:0000344,2.66e-18,15;UBERON:0001242,4.66e-15,13;UBERON:0001262,4.66e-15,13;UBERON:0004786,4.66e-15,13;UBERON:0004923,3.42e-10,24;UBERON:0003350,1.01e-08,9;UBERON:0004808,1.01e-08,9;UBERON:0001277,1.01e-08,9;UBERON:0002108,2.47e-08,4;UBERON:0001007,4.50e-08,116;UBERON:0001555,4.50e-08,116;UBERON:0007026,4.50e-08,116;UBERON:0004119,8.35e-08,118;UBERON:0000925,8.35e-08,118;UBERON:0006595,8.35e-08,118;UBERON:0000485,6.27e-07,11;UBERON:0004921,8.99e-07,114 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,3.62957053568196,2.50447864973174,75.5456723603504,111.666842204661,0,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,92.1556355290023,84.1932061516514,4.59385571292016,24.9841957772263,46.9727287255238,223.467541280696,52.9263272495855,62.5280040047959,0,0,0,0.288851619751275,1.99481574430191,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3928870897496,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,18.954524033364,0,0,0,0,0.230615497256059,0,0.117588707135705,0.502666365318702,0,0.144599356919912,0,0.808834249737046,0.441683036920787,0.484875253135222,370.919604824063,0,0,202.321987725204,0,0,0,0,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0,0.505445516867349,0,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0,0,0.465067889500816,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0.102904612379284,113.664061346427,115.035996498642,0,0.232236671860439,0.644337306610467,8.87407508342707,20.4587800337281,32.1481308130225,158.967235617411,84.8199616828656,97.5180610145046,61.4775498607156,59.2690824842125,214.817838668359,796.252575738374,457.228363392027,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,3.35956781118687,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0,0.119372344003136,1.47726809770555,158.857055963269,0.370850604021019,0.170870880797853,0,0,0.565105371014073,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,1.72808545314882,0.627264888043406,1.52853794622324,0.674321731924103,0.826534557253359,0,201.810513415322,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.888986911206461,0.618105171716683,0.962757628775446,1.01078884705519,0.50695859978048,1.13175804831646,0.842773567228942,0.89635213366817,0.861532034334199,1.90517476513229,1.27472758539341,1.35036454324594,1.23625770240992,0.588795680537589,1.71434626192708,0.887379030796687,1.1921809497366,1.0174249164263,0.846984423737976,1.26921911837515,0.548783918618318,1.31534855718921,0.814824683075171,0.561142271657738,0.711810108745045,0.886540341380071,2.45538625901814,0.619747364743864,0.964533054905707,0,2.57324769289949,3.00819475667618,2.29545998482612,0,0.231867835620421 | |||
|short_description=p@chr7:148890317..148890367,+ | |||
}} |
Latest revision as of 13:20, 4 August 2015
Short description: | p@chr7:148890317..148890367, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148890317..148890367, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.60e-10 | 6 |
gut absorptive cell | 2.60e-10 | 6 |
enterocyte | 2.60e-10 | 6 |
intestinal epithelial cell | 1.01e-08 | 9 |
epithelial cell of alimentary canal | 1.01e-08 | 9 |
columnar/cuboidal epithelial cell | 1.02e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.63e-36 | 31 |
gastrointestinal system | 1.97e-27 | 47 |
mucosa | 2.66e-18 | 15 |
intestinal mucosa | 4.66e-15 | 13 |
wall of intestine | 4.66e-15 | 13 |
gastrointestinal system mucosa | 4.66e-15 | 13 |
organ component layer | 3.42e-10 | 24 |
epithelium of mucosa | 1.01e-08 | 9 |
gastrointestinal system epithelium | 1.01e-08 | 9 |
intestinal epithelium | 1.01e-08 | 9 |
small intestine | 2.47e-08 | 4 |
digestive system | 4.50e-08 | 116 |
digestive tract | 4.50e-08 | 116 |
primitive gut | 4.50e-08 | 116 |
endoderm-derived structure | 8.35e-08 | 118 |
endoderm | 8.35e-08 | 118 |
presumptive endoderm | 8.35e-08 | 118 |
simple columnar epithelium | 6.27e-07 | 11 |
subdivision of digestive tract | 8.99e-07 | 114 |