FFCP PHASE1:Mm9::chr5:73583075..73583086,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=195|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:73583075..73583086,-|id=chr5:73583075..73583086,-|ontology_enrichment_celltype=CL:0002563!4.17e-15!9;CL:0002251!4.17e-15!9;CL:0000239!3.74e-11!6;CL:0000677!3.74e-11!6;CL:0000212!3.74e-11!6;CL:0000584!3.74e-11!6;CL:0000075!2.09e-09!7;CL:0002076!3.28e-08!15;CL:0000066!7.43e-08!25|ontology_enrichment_celltype_v019_2=CL:0002563,2.29e-21,9;CL:0002251,2.29e-21,9;CL:0000239,4.05e-19,6;CL:0000677,4.05e-19,6;CL:0000584,4.05e-19,6;CL:0000075,2.65e-16,7;CL:0000066,2.81e-13,25;CL:0002076,2.48e-12,15;CL:0000682,3.83e-10,3;CL:0000223,6.11e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.32e-31!59;UBERON:0004923!2.13e-28!24;UBERON:0000160!5.88e-26!43;UBERON:0000344!4.50e-24!15;UBERON:0001242!2.83e-21!13;UBERON:0000060!2.83e-21!13;UBERON:0001262!2.83e-21!13;UBERON:0004786!2.83e-21!13;UBERON:0004119!1.36e-16!130;UBERON:0000925!1.36e-16!130;UBERON:0006595!1.36e-16!130;UBERON:0003350!4.17e-15!9;UBERON:0004808!4.17e-15!9;UBERON:0001277!4.17e-15!9;UBERON:0001007!4.23e-15!128;UBERON:0001555!4.23e-15!128;UBERON:0007026!4.23e-15!128;UBERON:0004921!1.87e-13!126;UBERON:0004185!1.87e-13!126;UBERON:0000485!5.80e-12!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.21e-49,31;UBERON:0000344,1.00e-37,15;UBERON:0005409,2.49e-34,47;UBERON:0001242,1.39e-32,13;UBERON:0001262,1.39e-32,13;UBERON:0004786,1.39e-32,13;UBERON:0004923,1.60e-22,24;UBERON:0003350,2.29e-21,9;UBERON:0004808,2.29e-21,9;UBERON:0001277,2.29e-21,9;UBERON:0000485,2.91e-17,11;UBERON:0001007,1.49e-13,116;UBERON:0001555,1.49e-13,116;UBERON:0007026,1.49e-13,116;UBERON:0004119,3.07e-13,118;UBERON:0000925,3.07e-13,118;UBERON:0006595,3.07e-13,118;UBERON:0002108,1.90e-12,4;UBERON:0004921,2.13e-11,114;UBERON:0000331,1.67e-09,3;UBERON:0002116,1.67e-09,3;UBERON:0001204,1.67e-09,3;UBERON:0001168,1.67e-09,3;UBERON:0001155,1.56e-07,2;UBERON:0000059,1.56e-07,2|phase1_expression=0,6.2815573375085,2.72999543633722,7.25914107136392,7.01254021924886,3.52546471014969,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.14704640533585,6.31655160526522,3.4460959692726,2.58565479223067,4.18051522804023,1.26015064879965,2.21730510655305,0,0,0,2.3108129580102,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,7.45567044872489,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5646574044329,0.793351699990633,0,0,0.38660238396628,0.605050573870028,0,0.760902504450237,3.79623249235609,2.14108641141214,1.00534083520108,3.38226002469956,2.53453313254856,5.39291645192533,3.8904848977445,4.97853183135918,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,4.95517422270746,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0.539457385539283,0.661227645802687,0.785267825952089,8.29535829067474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr5:73583075..73583086,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:73583075..73583086,- | |||
|description=CAGE_peak_at_chr5:73583075..73583086,- | |||
|id=chr5:73583075..73583086,- | |||
|ontology_enrichment_celltype=CL:0002563!4.17e-15!9;CL:0002251!4.17e-15!9;CL:0000239!3.74e-11!6;CL:0000677!3.74e-11!6;CL:0000212!3.74e-11!6;CL:0000584!3.74e-11!6;CL:0000075!2.09e-09!7;CL:0002076!3.28e-08!15;CL:0000066!7.43e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.29e-21,9;CL:0002251,2.29e-21,9;CL:0000239,4.05e-19,6;CL:0000677,4.05e-19,6;CL:0000584,4.05e-19,6;CL:0000075,2.65e-16,7;CL:0000066,2.81e-13,25;CL:0002076,2.48e-12,15;CL:0000682,3.83e-10,3;CL:0000223,6.11e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.32e-31!59;UBERON:0004923!2.13e-28!24;UBERON:0000160!5.88e-26!43;UBERON:0000344!4.50e-24!15;UBERON:0001242!2.83e-21!13;UBERON:0000060!2.83e-21!13;UBERON:0001262!2.83e-21!13;UBERON:0004786!2.83e-21!13;UBERON:0004119!1.36e-16!130;UBERON:0000925!1.36e-16!130;UBERON:0006595!1.36e-16!130;UBERON:0003350!4.17e-15!9;UBERON:0004808!4.17e-15!9;UBERON:0001277!4.17e-15!9;UBERON:0001007!4.23e-15!128;UBERON:0001555!4.23e-15!128;UBERON:0007026!4.23e-15!128;UBERON:0004921!1.87e-13!126;UBERON:0004185!1.87e-13!126;UBERON:0000485!5.80e-12!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.21e-49,31;UBERON:0000344,1.00e-37,15;UBERON:0005409,2.49e-34,47;UBERON:0001242,1.39e-32,13;UBERON:0001262,1.39e-32,13;UBERON:0004786,1.39e-32,13;UBERON:0004923,1.60e-22,24;UBERON:0003350,2.29e-21,9;UBERON:0004808,2.29e-21,9;UBERON:0001277,2.29e-21,9;UBERON:0000485,2.91e-17,11;UBERON:0001007,1.49e-13,116;UBERON:0001555,1.49e-13,116;UBERON:0007026,1.49e-13,116;UBERON:0004119,3.07e-13,118;UBERON:0000925,3.07e-13,118;UBERON:0006595,3.07e-13,118;UBERON:0002108,1.90e-12,4;UBERON:0004921,2.13e-11,114;UBERON:0000331,1.67e-09,3;UBERON:0002116,1.67e-09,3;UBERON:0001204,1.67e-09,3;UBERON:0001168,1.67e-09,3;UBERON:0001155,1.56e-07,2;UBERON:0000059,1.56e-07,2 | |||
|phase1_expression=0,6.2815573375085,2.72999543633722,7.25914107136392,7.01254021924886,3.52546471014969,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.14704640533585,6.31655160526522,3.4460959692726,2.58565479223067,4.18051522804023,1.26015064879965,2.21730510655305,0,0,0,2.3108129580102,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,7.45567044872489,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5646574044329,0.793351699990633,0,0,0.38660238396628,0.605050573870028,0,0.760902504450237,3.79623249235609,2.14108641141214,1.00534083520108,3.38226002469956,2.53453313254856,5.39291645192533,3.8904848977445,4.97853183135918,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,4.95517422270746,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0,0,0.539457385539283,0.661227645802687,0.785267825952089,8.29535829067474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr5:73583075..73583086,- | |||
}} |
Latest revision as of 14:21, 4 August 2015
Short description: | p@chr5:73583075..73583086, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73583075..73583086, - |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.29e-21 | 9 |
epithelial cell of alimentary canal | 2.29e-21 | 9 |
brush border epithelial cell | 4.05e-19 | 6 |
gut absorptive cell | 4.05e-19 | 6 |
enterocyte | 4.05e-19 | 6 |
columnar/cuboidal epithelial cell | 2.65e-16 | 7 |
epithelial cell | 2.81e-13 | 25 |
endo-epithelial cell | 2.48e-12 | 15 |
M cell of gut | 3.83e-10 | 3 |
endodermal cell | 6.11e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.21e-49 | 31 |
mucosa | 1.00e-37 | 15 |
gastrointestinal system | 2.49e-34 | 47 |
intestinal mucosa | 1.39e-32 | 13 |
wall of intestine | 1.39e-32 | 13 |
gastrointestinal system mucosa | 1.39e-32 | 13 |
organ component layer | 1.60e-22 | 24 |
epithelium of mucosa | 2.29e-21 | 9 |
gastrointestinal system epithelium | 2.29e-21 | 9 |
intestinal epithelium | 2.29e-21 | 9 |
simple columnar epithelium | 2.91e-17 | 11 |
digestive system | 1.49e-13 | 116 |
digestive tract | 1.49e-13 | 116 |
primitive gut | 1.49e-13 | 116 |
endoderm-derived structure | 3.07e-13 | 118 |
endoderm | 3.07e-13 | 118 |
presumptive endoderm | 3.07e-13 | 118 |
small intestine | 1.90e-12 | 4 |
subdivision of digestive tract | 2.13e-11 | 114 |
ileal mucosa | 1.67e-09 | 3 |
ileum | 1.67e-09 | 3 |
mucosa of small intestine | 1.67e-09 | 3 |
wall of small intestine | 1.67e-09 | 3 |
colon | 1.56e-07 | 2 |
large intestine | 1.56e-07 | 2 |