FFCP PHASE1:Mm9::chr14:66594437..66594457,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=290|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:66594437..66594457,+|id=chr14:66594437..66594457,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.69e-10,5;CL:0002453,9.81e-08,8;CL:0000068,3.12e-07,3;CL:0002202,3.12e-07,3;CL:0000069,3.12e-07,3;CL:0002632,3.12e-07,3;CL:0002368,3.12e-07,3;CL:0000307,3.12e-07,3;CL:0000377,3.12e-07,3;CL:0000223,8.76e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000062!1.13e-10!269;UBERON:0000466!3.29e-10!79;UBERON:0003886!1.48e-08!38;UBERON:0000480!4.68e-08!308;UBERON:0000467!4.68e-08!308;UBERON:0002553!4.71e-08!39;UBERON:0002323!6.30e-08!37;UBERON:0004458!6.30e-08!37;UBERON:0000464!2.30e-07!57;UBERON:0002050!4.43e-07!317;UBERON:0005423!4.43e-07!317;UBERON:0001264!6.69e-07!12;UBERON:0003922!6.69e-07!12;UBERON:0002114!6.69e-07!12;UBERON:0003923!6.69e-07!12;UBERON:0003924!6.69e-07!12;UBERON:0003921!6.69e-07!12;UBERON:0000923!7.33e-07!314;UBERON:0005291!7.33e-07!314;UBERON:0006598!7.33e-07!314;UBERON:0002532!7.33e-07!314;UBERON:0007023!7.72e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.19e-07,12;UBERON:0003126,3.12e-07,3;UBERON:0001005,3.12e-07,3;UBERON:0007196,3.12e-07,3;UBERON:0001558,3.12e-07,3|phase1_expression=0.960893082628764,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.95995453676044,1.60586496747019,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,2.39827672018491,1.31811709640683,2.72201858703997,0.279972843250725,2.87505128729943,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,2.09720077362883,3.45796474789399,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,4.40463523997555,0.638436690425939,1.38245879930619,0.131886287730194,0,0,0.279182999001381,1.68828783009504,2.13917546887534,0,0.142371680799103,0,0,0,5.50742528533188,0,8.83962733820076,4.85732872474035,6.49776417447669,5.82434953226536,0.702222100658759,0,0,0,3.80277233397037,0,2.54805239706646,0,15.154372870785,10.6411143499541,20.2209778005913,1.48439043634778,1.8125651855302,0.593768556259299,0,0,0.230615497256059,0,0.470354828542819,0.251333182659351,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0.83778682725382,0.510914110417183,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,1.56441888173049,1.02286182932132,1.24672826735736,0.648965052271031,0,0.995255764880744,15.6688110228878,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0,0.439100230582101,0,1.26173969138476,0.308713837137853,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0.38992817423824,0.898819408654221,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.470996183524124,0.246794327843601,3.85388415213294,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,8.62609239164127,0.744281895337007,1.5601883655728,0.757736633841335,1.4351793081753,0.964887042726734,0.554259570499814,0,0,0.339490171550376,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.983528546038072,1.37968373152366,0.963303539926752,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0,0,0,3.98235415019888,0.242780636154981,0.604647113929502,1.32023555829129,2.36241514304618,2.15204603560749,0.775284879504663,1.09060118843252,0.356497378384721,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0.119372344003136,0.328281799490123,0,0.370850604021019,0.683483523191411,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0.203319467126849,0.216010681643603,0.627264888043406,0.218362563746178,0.944050424693745,0.743881101528023,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.777804753376191,1.03327858782185,1.18269287843545,1.5256441023948,0.911430693907651,1.46803082195995,1.44950472495604,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.579568782096571,0,0.549454872801795,0.214368379079066,1.00314420807073,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,2.05524755931193,3.0215755895588,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr14:66594437..66594457,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=290 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:66594437..66594457,+ | |||
|description=CAGE_peak_at_chr14:66594437..66594457,+ | |||
|id=chr14:66594437..66594457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.69e-10,5;CL:0002453,9.81e-08,8;CL:0000068,3.12e-07,3;CL:0002202,3.12e-07,3;CL:0000069,3.12e-07,3;CL:0002632,3.12e-07,3;CL:0002368,3.12e-07,3;CL:0000307,3.12e-07,3;CL:0000377,3.12e-07,3;CL:0000223,8.76e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.13e-10!269;UBERON:0000466!3.29e-10!79;UBERON:0003886!1.48e-08!38;UBERON:0000480!4.68e-08!308;UBERON:0000467!4.68e-08!308;UBERON:0002553!4.71e-08!39;UBERON:0002323!6.30e-08!37;UBERON:0004458!6.30e-08!37;UBERON:0000464!2.30e-07!57;UBERON:0002050!4.43e-07!317;UBERON:0005423!4.43e-07!317;UBERON:0001264!6.69e-07!12;UBERON:0003922!6.69e-07!12;UBERON:0002114!6.69e-07!12;UBERON:0003923!6.69e-07!12;UBERON:0003924!6.69e-07!12;UBERON:0003921!6.69e-07!12;UBERON:0000923!7.33e-07!314;UBERON:0005291!7.33e-07!314;UBERON:0006598!7.33e-07!314;UBERON:0002532!7.33e-07!314;UBERON:0007023!7.72e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.19e-07,12;UBERON:0003126,3.12e-07,3;UBERON:0001005,3.12e-07,3;UBERON:0007196,3.12e-07,3;UBERON:0001558,3.12e-07,3 | |||
|phase1_expression=0.960893082628764,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.95995453676044,1.60586496747019,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,2.39827672018491,1.31811709640683,2.72201858703997,0.279972843250725,2.87505128729943,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,2.09720077362883,3.45796474789399,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,4.40463523997555,0.638436690425939,1.38245879930619,0.131886287730194,0,0,0.279182999001381,1.68828783009504,2.13917546887534,0,0.142371680799103,0,0,0,5.50742528533188,0,8.83962733820076,4.85732872474035,6.49776417447669,5.82434953226536,0.702222100658759,0,0,0,3.80277233397037,0,2.54805239706646,0,15.154372870785,10.6411143499541,20.2209778005913,1.48439043634778,1.8125651855302,0.593768556259299,0,0,0.230615497256059,0,0.470354828542819,0.251333182659351,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0.83778682725382,0.510914110417183,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,1.56441888173049,1.02286182932132,1.24672826735736,0.648965052271031,0,0.995255764880744,15.6688110228878,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0,0.439100230582101,0,1.26173969138476,0.308713837137853,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0.38992817423824,0.898819408654221,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.470996183524124,0.246794327843601,3.85388415213294,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,8.62609239164127,0.744281895337007,1.5601883655728,0.757736633841335,1.4351793081753,0.964887042726734,0.554259570499814,0,0,0.339490171550376,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.983528546038072,1.37968373152366,0.963303539926752,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0,0,0,3.98235415019888,0.242780636154981,0.604647113929502,1.32023555829129,2.36241514304618,2.15204603560749,0.775284879504663,1.09060118843252,0.356497378384721,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0.119372344003136,0.328281799490123,0,0.370850604021019,0.683483523191411,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0.203319467126849,0.216010681643603,0.627264888043406,0.218362563746178,0.944050424693745,0.743881101528023,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.777804753376191,1.03327858782185,1.18269287843545,1.5256441023948,0.911430693907651,1.46803082195995,1.44950472495604,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.579568782096571,0,0.549454872801795,0.214368379079066,1.00314420807073,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,2.05524755931193,3.0215755895588,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr14:66594437..66594457,+ | |||
}} |
Latest revision as of 16:20, 4 August 2015
Short description: | p@chr14:66594437..66594457, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66594437..66594457, + |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.69e-10 | 5 |
oligodendrocyte precursor cell | 9.81e-08 | 8 |
duct epithelial cell | 3.12e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.12e-07 | 3 |
branched duct epithelial cell | 3.12e-07 | 3 |
epithelial cell of lower respiratory tract | 3.12e-07 | 3 |
respiratory epithelial cell | 3.12e-07 | 3 |
tracheal epithelial cell | 3.12e-07 | 3 |
tracheoblast | 3.12e-07 | 3 |
endodermal cell | 8.76e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.19e-07 | 12 |
trachea | 3.12e-07 | 3 |
respiratory airway | 3.12e-07 | 3 |
tracheobronchial tree | 3.12e-07 | 3 |
lower respiratory tract | 3.12e-07 | 3 |