FFCP PHASE1:Mm9::chr14:66599823..66599861,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:66599823..66599861,-|id=chr14:66599823..66599861,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.15e-08,3;CL:0002202,2.15e-08,3;CL:0000069,2.15e-08,3;CL:0002632,2.15e-08,3;CL:0002368,2.15e-08,3;CL:0000307,2.15e-08,3;CL:0000377,2.15e-08,3;CL:0002614,1.79e-07,3;CL:0000182,2.02e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000062!9.82e-13!269;UBERON:0000466!3.01e-12!79;UBERON:0003135!2.05e-09!15;UBERON:0000480!2.48e-09!308;UBERON:0000467!2.48e-09!308;UBERON:0003886!1.24e-08!38;UBERON:0000473!1.30e-08!14;UBERON:0000923!1.98e-08!314;UBERON:0005291!1.98e-08!314;UBERON:0006598!1.98e-08!314;UBERON:0002532!1.98e-08!314;UBERON:0003101!2.00e-08!16;UBERON:0000079!2.00e-08!16;UBERON:0002553!3.91e-08!39;UBERON:0002323!5.31e-08!37;UBERON:0004458!5.31e-08!37;UBERON:0002050!7.31e-08!317;UBERON:0005423!7.31e-08!317;UBERON:0000991!8.10e-08!18;UBERON:0005564!8.10e-08!18;UBERON:0004176!8.41e-08!17;UBERON:0009196!8.41e-08!17;UBERON:0009117!8.41e-08!17;UBERON:0000464!1.45e-07!57;UBERON:0004111!5.17e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.15e-08,3;UBERON:0001005,2.15e-08,3;UBERON:0007196,2.15e-08,3;UBERON:0001558,2.15e-08,3;UBERON:0002107,3.49e-08,22;UBERON:0007499,3.49e-08,22;UBERON:0006925,3.49e-08,22;UBERON:0009497,3.49e-08,22;UBERON:0000015,3.49e-08,22;UBERON:0002423,3.49e-08,22;UBERON:0006235,3.49e-08,22;UBERON:0008835,3.49e-08,22;UBERON:0003894,3.49e-08,22;UBERON:0004161,3.49e-08,22;UBERON:0008836,3.49e-08,22;UBERON:0000058,5.99e-08,7;UBERON:0003135,8.21e-08,15;UBERON:0009854,9.70e-08,23;UBERON:0009856,9.70e-08,23;UBERON:0002038,1.79e-07,3;UBERON:0009663,1.79e-07,3;UBERON:0009661,1.79e-07,3;UBERON:0000125,1.79e-07,3;UBERON:0002308,1.79e-07,3;UBERON:0003101,3.07e-07,16;UBERON:0000079,3.07e-07,16;UBERON:0002365,5.84e-07,25;UBERON:0002330,5.84e-07,25|phase1_expression=1.92178616525753,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,1.11994695955385,2.75291137280604,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,2.63623419281366,2.72201858703997,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0.633831403506179,1.0165335962074,0,0,0,0,1.79760066311043,3.45796474789399,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,0.510749352340751,0.614426133024974,0,0,0,3.62937898701795,2.25105044012672,2.13917546887534,0,0.142371680799103,0,0,0,2.31891590961342,5.16254326188832,10.1995700056163,3.2382191498269,0.649776417447669,1.34408066129201,0.842666520790511,0.170430322578058,0,0,8.30976176682415,0,0,0,32.2571651106709,30.6565437224869,34.88118670602,0.68510327831436,0,0.148442139064825,0,0.304465478312141,0,0,0,0.502666365318702,0.494389935468748,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.695297280769106,1.02286182932132,1.0389402227978,1.1356888414743,0.407357455401265,1.7416975885413,12.8888606801174,0,0.130120442962704,0.459804208866946,0,0.30140963567143,0.272145996605311,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.805238512562231,0.630869845692382,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.627994911365499,0.616985819609003,4.74324203339438,0,0.196558995113203,0,0,0,0.25462585178142,0.863088412352432,0,0.274561413188081,2.87536413054709,0,1.87222603868736,1.01031551178845,0.896987067609561,1.92977408545347,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.943025398779491,1.18120757152309,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,2.10837217149998,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0,0.238744688006273,0.492422699235184,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0.655087691238533,0.404593039154462,0.909188012978695,2.09404753587224,0,0,0.56369293868419,0.897099276263873,1.82004339502807,0.777804753376191,1.80823752868824,1.85851738039856,0.58678619322877,1.3020438484395,1.78260885523708,3.62376181239009,0.864090018773596,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0.171853182343688,1.37016503954128,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p@chr14:66599823..66599861,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:66599823..66599861,- | |||
|description=CAGE_peak_at_chr14:66599823..66599861,- | |||
|id=chr14:66599823..66599861,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.15e-08,3;CL:0002202,2.15e-08,3;CL:0000069,2.15e-08,3;CL:0002632,2.15e-08,3;CL:0002368,2.15e-08,3;CL:0000307,2.15e-08,3;CL:0000377,2.15e-08,3;CL:0002614,1.79e-07,3;CL:0000182,2.02e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!9.82e-13!269;UBERON:0000466!3.01e-12!79;UBERON:0003135!2.05e-09!15;UBERON:0000480!2.48e-09!308;UBERON:0000467!2.48e-09!308;UBERON:0003886!1.24e-08!38;UBERON:0000473!1.30e-08!14;UBERON:0000923!1.98e-08!314;UBERON:0005291!1.98e-08!314;UBERON:0006598!1.98e-08!314;UBERON:0002532!1.98e-08!314;UBERON:0003101!2.00e-08!16;UBERON:0000079!2.00e-08!16;UBERON:0002553!3.91e-08!39;UBERON:0002323!5.31e-08!37;UBERON:0004458!5.31e-08!37;UBERON:0002050!7.31e-08!317;UBERON:0005423!7.31e-08!317;UBERON:0000991!8.10e-08!18;UBERON:0005564!8.10e-08!18;UBERON:0004176!8.41e-08!17;UBERON:0009196!8.41e-08!17;UBERON:0009117!8.41e-08!17;UBERON:0000464!1.45e-07!57;UBERON:0004111!5.17e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.15e-08,3;UBERON:0001005,2.15e-08,3;UBERON:0007196,2.15e-08,3;UBERON:0001558,2.15e-08,3;UBERON:0002107,3.49e-08,22;UBERON:0007499,3.49e-08,22;UBERON:0006925,3.49e-08,22;UBERON:0009497,3.49e-08,22;UBERON:0000015,3.49e-08,22;UBERON:0002423,3.49e-08,22;UBERON:0006235,3.49e-08,22;UBERON:0008835,3.49e-08,22;UBERON:0003894,3.49e-08,22;UBERON:0004161,3.49e-08,22;UBERON:0008836,3.49e-08,22;UBERON:0000058,5.99e-08,7;UBERON:0003135,8.21e-08,15;UBERON:0009854,9.70e-08,23;UBERON:0009856,9.70e-08,23;UBERON:0002038,1.79e-07,3;UBERON:0009663,1.79e-07,3;UBERON:0009661,1.79e-07,3;UBERON:0000125,1.79e-07,3;UBERON:0002308,1.79e-07,3;UBERON:0003101,3.07e-07,16;UBERON:0000079,3.07e-07,16;UBERON:0002365,5.84e-07,25;UBERON:0002330,5.84e-07,25 | |||
|phase1_expression=1.92178616525753,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,1.11994695955385,2.75291137280604,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,2.63623419281366,2.72201858703997,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0.633831403506179,1.0165335962074,0,0,0,0,1.79760066311043,3.45796474789399,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,0.510749352340751,0.614426133024974,0,0,0,3.62937898701795,2.25105044012672,2.13917546887534,0,0.142371680799103,0,0,0,2.31891590961342,5.16254326188832,10.1995700056163,3.2382191498269,0.649776417447669,1.34408066129201,0.842666520790511,0.170430322578058,0,0,8.30976176682415,0,0,0,32.2571651106709,30.6565437224869,34.88118670602,0.68510327831436,0,0.148442139064825,0,0.304465478312141,0,0,0,0.502666365318702,0.494389935468748,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.695297280769106,1.02286182932132,1.0389402227978,1.1356888414743,0.407357455401265,1.7416975885413,12.8888606801174,0,0.130120442962704,0.459804208866946,0,0.30140963567143,0.272145996605311,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.805238512562231,0.630869845692382,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.627994911365499,0.616985819609003,4.74324203339438,0,0.196558995113203,0,0,0,0.25462585178142,0.863088412352432,0,0.274561413188081,2.87536413054709,0,1.87222603868736,1.01031551178845,0.896987067609561,1.92977408545347,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.943025398779491,1.18120757152309,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,2.10837217149998,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0,0.238744688006273,0.492422699235184,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0.655087691238533,0.404593039154462,0.909188012978695,2.09404753587224,0,0,0.56369293868419,0.897099276263873,1.82004339502807,0.777804753376191,1.80823752868824,1.85851738039856,0.58678619322877,1.3020438484395,1.78260885523708,3.62376181239009,0.864090018773596,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0.171853182343688,1.37016503954128,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr14:66599823..66599861,- | |||
}} |
Latest revision as of 16:25, 4 August 2015
Short description: | p@chr14:66599823..66599861, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66599823..66599861, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.15e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.15e-08 | 3 |
branched duct epithelial cell | 2.15e-08 | 3 |
epithelial cell of lower respiratory tract | 2.15e-08 | 3 |
respiratory epithelial cell | 2.15e-08 | 3 |
tracheal epithelial cell | 2.15e-08 | 3 |
tracheoblast | 2.15e-08 | 3 |
neuron of the substantia nigra | 1.79e-07 | 3 |
hepatocyte | 2.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.15e-08 | 3 |
respiratory airway | 2.15e-08 | 3 |
tracheobronchial tree | 2.15e-08 | 3 |
lower respiratory tract | 2.15e-08 | 3 |
liver | 3.49e-08 | 22 |
epithelial sac | 3.49e-08 | 22 |
digestive gland | 3.49e-08 | 22 |
epithelium of foregut-midgut junction | 3.49e-08 | 22 |
anatomical boundary | 3.49e-08 | 22 |
hepatobiliary system | 3.49e-08 | 22 |
foregut-midgut junction | 3.49e-08 | 22 |
hepatic diverticulum | 3.49e-08 | 22 |
liver primordium | 3.49e-08 | 22 |
septum transversum | 3.49e-08 | 22 |
liver bud | 3.49e-08 | 22 |
duct | 5.99e-08 | 7 |
male reproductive organ | 8.21e-08 | 15 |
digestive tract diverticulum | 9.70e-08 | 23 |
sac | 9.70e-08 | 23 |
substantia nigra | 1.79e-07 | 3 |
telencephalic nucleus | 1.79e-07 | 3 |
midbrain nucleus | 1.79e-07 | 3 |
neural nucleus | 1.79e-07 | 3 |
nucleus of brain | 1.79e-07 | 3 |
male organism | 3.07e-07 | 16 |
male reproductive system | 3.07e-07 | 16 |
exocrine gland | 5.84e-07 | 25 |
exocrine system | 5.84e-07 | 25 |